RNA–Protein interactions for RNA: ENST00000555883.5

HNRNPC-221, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,182 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-221ENST00000555883 CDK5RAP2Q96SN8 1893 aa15.45■□□□□ 0.06
HNRNPC-221ENST00000555883 TNPO2O14787 897 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 GJB1P08034 283 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 GJA8P48165 433 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 PDE3AQ14432 1141 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 ANKRD13CQ8N6S4 541 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 COA7Q96BR5 231 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 RIOK1Q9BRS2 568 aaKnown RBP15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 ASCC2Q9H1I8 757 aaPredicted RBP15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 IL1RAPL2Q9NP60 686 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 MORF4L1Q9UBU8 362 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 SERPINB13Q9UIV8 391 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 ZBTB21Q9ULJ3 1066 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 COG6Q9Y2V7 657 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 MGAMO43451 1857 aa15.44■□□□□ 0.06
HNRNPC-221ENST00000555883 USP17L10C9JJH3 530 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 USP5P45974 858 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 FLT3LGP49771 235 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 MTMR2Q13614 643 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 MTFR1Q15390 333 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 TTC6Q86TZ1 520 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 MIGA1Q8NAN2 632 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 TMOD4Q9NZQ9 345 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 GABRQQ9UN88 632 aa15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 MYO5AQ9Y4I1 1855 aaKnown RBP15.43■□□□□ 0.06
HNRNPC-221ENST00000555883 ADCY3O60266 1144 aa15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 IFIT2P09913 472 aaKnown RBP15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 CCL5P13501 91 aa15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 JAG1P78504 1218 aa15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 GTF3C2Q8WUA4 911 aaPredicted RBP15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 SHISA4Q96DD7 197 aa15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 SAP30BPQ9UHR5 308 aaKnown RBP15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 NDUFB9Q9Y6M9 179 aa15.42■□□□□ 0.06
HNRNPC-221ENST00000555883 DDX60LQ5H9U9 1706 aaKnown RBP15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 ECM2O94769 699 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 PDE6AP16499 860 aa15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 IRX3P78415 501 aaPredicted RBP15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 SLC9C2Q5TAH2 1124 aa15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 UBE2Q1Q7Z7E8 422 aa15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 C12orf42Q96LP6 360 aa15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 RNF208Q9H0X6 261 aa15.41■□□□□ 0.06
HNRNPC-221ENST00000555883 MAGEB6P1A0A0J9YX57 407 aa15.4■□□□□ 0.06
HNRNPC-221ENST00000555883 TCRBV5S4A2TA0A5A2 114 aa15.4■□□□□ 0.06
HNRNPC-221ENST00000555883 GDF11O95390 407 aa15.4■□□□□ 0.06
HNRNPC-221ENST00000555883 MYCP01106 439 aaPredicted RBP15.4■□□□□ 0.06
HNRNPC-221ENST00000555883 CRNKL1Q9BZJ0 848 aaKnown RBP15.4■□□□□ 0.06
HNRNPC-221ENST00000555883 BIN2Q9UBW5 565 aaPredicted RBP15.4■□□□□ 0.06
HNRNPC-221ENST00000555883 GH2P01242 217 aa15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 ATP5JP18859 108 aa15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 USP14P54578 494 aa15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 HERVK_113P62684 666 aa15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 GABPAQ06546 454 aa15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L2Q6R6M4 530 aa15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 KIAA1683Q9H0B3 1180 aa15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 PAK6Q9NQU5 681 aaPredicted RBP15.39■□□□□ 0.05
HNRNPC-221ENST00000555883 GOLIM4O00461 696 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 SGPL1O95470 568 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 INHAP05111 366 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 SHROOM1Q2M3G4 852 aaPredicted RBP15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 CERKLQ49MI3 558 aaPredicted RBP15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 GPRC5AQ8NFJ5 357 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 U2AF1L4Q8WU68 220 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 P2RX7Q99572 595 aaKnown RBP15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 EMILIN3Q9NT22 766 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 PAG1Q9NWQ8 432 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 GJD2Q9UKL4 321 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 MYH1P12882 1939 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 ZNF532Q9HCE3 1301 aa15.38■□□□□ 0.05
HNRNPC-221ENST00000555883 ELNP15502 786 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 SHMT1P34896 483 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 PLCD1P51178 756 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 ABCB5Q2M3G0 1257 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 SOCS4Q8WXH5 440 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 DNAJC2Q99543 621 aaKnown RBP15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 HAUS7Q99871 368 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 LRRCC1Q9C099 1032 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 UNC93B1Q9H1C4 597 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 CABP5Q9NP86 173 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 PCDH10Q9P2E7 1040 aa15.37■□□□□ 0.05
HNRNPC-221ENST00000555883 APBB1O00213 710 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 HMGCRP04035 888 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 POLR3DP05423 398 aaPredicted RBP15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 XRCC5P13010 732 aaKnown RBP15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 MAPK4P31152 587 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 ADD2P35612 726 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 LBX2Q6XYB7 198 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 HTATIP2Q9BUP3 242 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 CRISPLD2Q9H0B8 497 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 DCP1AQ9NPI6 582 aaPredicted RBP15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 ATP8A2Q9NTI2 1148 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 RBPJLQ9UBG7 517 aa15.36■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L15C9J2P7 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L13C9JLJ4 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L11C9JVI0 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L18D6R9N7 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L22D6RA61 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L17D6RBQ6 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L19D6RCP7 530 aa15.35■□□□□ 0.05
HNRNPC-221ENST00000555883 USP17L20D6RJB6 530 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms