RNA–Protein interactions for RNA: ENST00000555617.5

ABCD4-222, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 4

Gene ABCD4, Length 542 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-222ENST00000555617 SMCHD1A6NHR9 2005 aa14.8□□□□□ -0.04
ABCD4-222ENST00000555617 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.8□□□□□ -0.04
ABCD4-222ENST00000555617 TIMP1P01033 207 aa14.8□□□□□ -0.04
ABCD4-222ENST00000555617 CYP2C19P33261 490 aa14.8□□□□□ -0.04
ABCD4-222ENST00000555617 ZP2Q05996 745 aa14.8□□□□□ -0.04
ABCD4-222ENST00000555617 PTCRAQ6ISU1 281 aaPredicted RBP14.8□□□□□ -0.04
ABCD4-222ENST00000555617 FSD1Q9BTV5 496 aa14.8□□□□□ -0.04
ABCD4-222ENST00000555617 ASCC2Q9H1I8 757 aaPredicted RBP14.8□□□□□ -0.04
ABCD4-222ENST00000555617 TBX21Q9UL17 535 aa14.8□□□□□ -0.04
ABCD4-222ENST00000555617 ZNF521Q96K83 1311 aa14.8□□□□□ -0.04
ABCD4-222ENST00000555617 MYBBP1AQ9BQG0 1328 aaKnown RBP14.8□□□□□ -0.04
ABCD4-222ENST00000555617 GCN1Q92616 2671 aaKnown RBP14.79□□□□□ -0.04
ABCD4-222ENST00000555617 GRXCR2A6NFK2 248 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 KCNA5P22460 613 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 RGS2P41220 211 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 CTSWP56202 376 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 LRRC41Q15345 812 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 MFSD5Q6N075 450 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 SCYL3Q8IZE3 742 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 ADSSL1Q8N142 457 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 TTLL11Q8NHH1 800 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 HOOK2Q96ED9 719 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 CHPF2Q9P2E5 772 aa14.79□□□□□ -0.04
ABCD4-222ENST00000555617 MSCO60682 206 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 TAF5LO75529 589 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 IGHA2P01877 340 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 CYBAP13498 195 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 IRS1P35568 1242 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 GRB10Q13322 594 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 Q3C1V9 767 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 BMP8AQ7Z5Y6 402 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 ARRDC4Q8NCT1 418 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 PRRX2Q99811 253 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 IGSF5Q9NSI5 407 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 DBF4Q9UBU7 674 aaPredicted RBP14.78□□□□□ -0.04
ABCD4-222ENST00000555617 PNMA3Q9UL41 463 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 ASPMQ8IZT6 3477 aa14.78□□□□□ -0.04
ABCD4-222ENST00000555617 NAV2Q8IVL1 2488 aa14.77□□□□□ -0.04
ABCD4-222ENST00000555617 C19orf67A6NJJ6 358 aa14.77□□□□□ -0.05
ABCD4-222ENST00000555617 PCCAP05165 728 aaPredicted RBP14.77□□□□□ -0.05
ABCD4-222ENST00000555617 CHRNDQ07001 517 aa14.77□□□□□ -0.05
ABCD4-222ENST00000555617 PPIGQ13427 754 aaKnown RBP eCLIP14.77□□□□□ -0.051e-7■□□□□ 10.4
ABCD4-222ENST00000555617 KRT24Q2M2I5 525 aa14.77□□□□□ -0.05
ABCD4-222ENST00000555617 APOBEC3HQ6NTF7 200 aaKnown RBP14.77□□□□□ -0.05
ABCD4-222ENST00000555617 C15orf52Q6ZUT6 534 aaKnown RBP14.77□□□□□ -0.05
ABCD4-222ENST00000555617 GPR142Q7Z601 462 aa14.77□□□□□ -0.05
ABCD4-222ENST00000555617 NDUFB9Q9Y6M9 179 aa14.77□□□□□ -0.05
ABCD4-222ENST00000555617 ZIC2O95409 532 aaPredicted RBP14.76□□□□□ -0.05
ABCD4-222ENST00000555617 CA3P07451 260 aa14.76□□□□□ -0.05
ABCD4-222ENST00000555617 SLC5A1P13866 664 aa14.76□□□□□ -0.05
ABCD4-222ENST00000555617 KCNJ4P48050 445 aa14.76□□□□□ -0.05
ABCD4-222ENST00000555617 PBXIP1Q96AQ6 731 aa14.76□□□□□ -0.05
ABCD4-222ENST00000555617 PHF24Q9UPV7 400 aa14.76□□□□□ -0.05
ABCD4-222ENST00000555617 CYSRT1A8MQ03 144 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 DSG3P32926 999 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 TCP10Q12799 353 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 FAM47AQ5JRC9 791 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 FKBP1CQ5VVH2 108 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 MFSD14CQ5VZR4 134 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 PSRC1Q6PGN9 363 aaPredicted RBP14.75□□□□□ -0.05
ABCD4-222ENST00000555617 ZFPM1Q8IX07 1006 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 NPLOC4Q8TAT6 608 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 ARNTL2Q8WYA1 636 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 PCDHA11Q9Y5I1 949 aa14.75□□□□□ -0.05
ABCD4-222ENST00000555617 TMEM221A6NGB7 291 aa14.74□□□□□ -0.05
ABCD4-222ENST00000555617 M0R296 226 aa14.74□□□□□ -0.05
ABCD4-222ENST00000555617 NFIAQ12857 509 aa14.74□□□□□ -0.05
ABCD4-222ENST00000555617 MAP2K5Q13163 448 aa14.74□□□□□ -0.05
ABCD4-222ENST00000555617 HERC4Q5GLZ8 1057 aaPredicted RBP14.74□□□□□ -0.05
ABCD4-222ENST00000555617 OTOP2Q7RTS6 562 aa14.74□□□□□ -0.05
ABCD4-222ENST00000555617 ANKRD2Q9GZV1 360 aa14.74□□□□□ -0.05
ABCD4-222ENST00000555617 ATAD5Q96QE3 1844 aa14.73□□□□□ -0.05
ABCD4-222ENST00000555617 NBL1P41271 181 aa14.73□□□□□ -0.05
ABCD4-222ENST00000555617 ANKRD33Q7Z3H0 272 aa14.73□□□□□ -0.05
ABCD4-222ENST00000555617 ZNF804AQ7Z570 1209 aa14.73□□□□□ -0.05
ABCD4-222ENST00000555617 SPINK5Q9NQ38 1064 aaPredicted RBP14.73□□□□□ -0.05
ABCD4-222ENST00000555617 PICK1Q9NRD5 415 aa14.73□□□□□ -0.05
ABCD4-222ENST00000555617 EPHA10Q5JZY3 1008 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 FBXL6Q8N531 539 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 PROCA1Q8NCQ7 364 aaPredicted RBP14.72□□□□□ -0.05
ABCD4-222ENST00000555617 FAM151AQ8WW52 585 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 EDAQ92838 391 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 VWCEQ96DN2 955 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 RBPJLQ9UBG7 517 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 FRYLO94915 3013 aa14.72□□□□□ -0.05
ABCD4-222ENST00000555617 A0A1W2PQ45 241 aaPredicted RBP14.71□□□□□ -0.05
ABCD4-222ENST00000555617 A0A1W2PQY0 241 aa14.71□□□□□ -0.05
ABCD4-222ENST00000555617 SLC4A2P04920 1241 aa14.71□□□□□ -0.05
ABCD4-222ENST00000555617 TAP1Q03518 808 aa14.71□□□□□ -0.05
ABCD4-222ENST00000555617 PLEKHH3Q7Z736 793 aa14.71□□□□□ -0.05
ABCD4-222ENST00000555617 TDRD7Q8NHU6 1098 aaKnown RBP14.71□□□□□ -0.05
ABCD4-222ENST00000555617 EDC3Q96F86 508 aaKnown RBP14.71□□□□□ -0.05
ABCD4-222ENST00000555617 ZDHHC15Q96MV8 337 aa14.71□□□□□ -0.05
ABCD4-222ENST00000555617 PPP1R12CQ9BZL4 782 aa14.71□□□□□ -0.05
ABCD4-222ENST00000555617 TMOD2Q9NZR1 351 aa14.71□□□□□ -0.05
ABCD4-222ENST00000555617 PTPRSQ13332 1948 aa14.7□□□□□ -0.06
ABCD4-222ENST00000555617 H3BQ06 376 aaPredicted RBP14.7□□□□□ -0.06
ABCD4-222ENST00000555617 MAPK4P31152 587 aa14.7□□□□□ -0.06
ABCD4-222ENST00000555617 HMGCS2P54868 508 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms