RNA–Protein interactions for RNA: ENST00000555616.5

ACTN1-215, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 919 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-215ENST00000555616 SERPINB13Q9UIV8 391 aa11.59□□□□□ -0.55
ACTN1-215ENST00000555616 ZBTB21Q9ULJ3 1066 aa11.59□□□□□ -0.55
ACTN1-215ENST00000555616 TRIM17Q9Y577 477 aa11.59□□□□□ -0.55
ACTN1-215ENST00000555616 SALL3Q9BXA9 1300 aa11.59□□□□□ -0.55
ACTN1-215ENST00000555616 GLRX3O76003 335 aaKnown RBP11.58□□□□□ -0.56
ACTN1-215ENST00000555616 MBD4O95243 580 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 JAG1P78504 1218 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 LACTBP83111 547 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-215ENST00000555616 SLC4A8Q2Y0W8 1093 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 TSHZ3Q63HK5 1081 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 ZSCAN25Q6NSZ9 544 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 TATDN1Q6P1N9 297 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 GADL1Q6ZQY3 521 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 TTC6Q86TZ1 520 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 KBTBD3Q8NAB2 608 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 PROCA1Q8NCQ7 364 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-215ENST00000555616 WDR18Q9BV38 432 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 ARMT1Q9H993 441 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 EFCC1Q9HA90 598 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 AS3MTQ9HBK9 375 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 DCP1AQ9NPI6 582 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-215ENST00000555616 TAOK2Q9UL54 1235 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 AGTPBP1Q9UPW5 1226 aa11.58□□□□□ -0.56
ACTN1-215ENST00000555616 CHGBP05060 677 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 CYP2C8P10632 490 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 BCRP11274 1271 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 GABPAQ06546 454 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 SPP2Q13103 211 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 ARHGEF6Q15052 776 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 SHROOM1Q2M3G4 852 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-215ENST00000555616 SLFNL1Q499Z3 407 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 BMP2KLQ5H9B9 411 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 SH3D19Q5HYK7 790 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 TTC22Q5TAA0 569 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 SDR42E1Q8WUS8 393 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 CPA4Q9UI42 421 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 PTPN22Q9Y2R2 807 aa11.57□□□□□ -0.56
ACTN1-215ENST00000555616 MYH1P12882 1939 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 GDF11O95390 407 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 SHMT1P34896 483 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 PLCD1P51178 756 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 HMGCS2P54868 508 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 MTMR2Q13614 643 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 TREML2Q5T2D2 321 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 PI4K2BQ8TCG2 481 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 ARHGAP39Q9C0H5 1083 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 ATP8A2Q9NTI2 1148 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 MCM9Q9NXL9 1143 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 MYH7P12883 1935 aa11.56□□□□□ -0.56
ACTN1-215ENST00000555616 PRKAB2O43741 272 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 GNRH1P01148 92 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 GH2P01242 217 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 BACE1P56817 501 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 KIF22Q14807 665 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 ARMC5Q96C12 935 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 PUS7LQ9H0K6 701 aaKnown RBP11.55□□□□□ -0.56
ACTN1-215ENST00000555616 PCDH10Q9P2E7 1040 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 PNMA3Q9UL41 463 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 ZSWIM8A7E2V4 1837 aa11.55□□□□□ -0.56
ACTN1-215ENST00000555616 POLR3DP05423 398 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-215ENST00000555616 ZFYP08048 801 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-215ENST00000555616 CYP2D6P10635 497 aa11.54□□□□□ -0.56
ACTN1-215ENST00000555616 CTGFP29279 349 aa11.54□□□□□ -0.56
ACTN1-215ENST00000555616 PRMT2P55345 433 aa11.54□□□□□ -0.56
ACTN1-215ENST00000555616 EVX2Q03828 476 aa11.54□□□□□ -0.56
ACTN1-215ENST00000555616 PABPC4Q13310 644 aaKnown RBP eCLIP11.54□□□□□ -0.56
ACTN1-215ENST00000555616 SMCR8Q8TEV9 937 aaPredicted RBP11.54□□□□□ -0.56
ACTN1-215ENST00000555616 APPBP2Q92624 585 aa11.54□□□□□ -0.56
ACTN1-215ENST00000555616 TRIM47Q96LD4 638 aa11.54□□□□□ -0.56
ACTN1-215ENST00000555616 TRIM6-TRIM34B2RNG4 842 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 C19orf81C9J6K1 198 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 USP17L10C9JJH3 530 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 RNF113AO15541 343 aaKnown RBP11.53□□□□□ -0.56
ACTN1-215ENST00000555616 SOX10P56693 466 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 FAM110CQ1W6H9 321 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 ABCB5Q2M3G0 1257 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 LRRFIP1Q32MZ4 808 aaKnown RBP11.53□□□□□ -0.56
ACTN1-215ENST00000555616 CERKLQ49MI3 558 aaPredicted RBP11.53□□□□□ -0.56
ACTN1-215ENST00000555616 OSBP2Q969R2 916 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 C12orf42Q96LP6 360 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 STRBPQ96SI9 672 aaKnown RBP11.53□□□□□ -0.56
ACTN1-215ENST00000555616 TMOD4Q9NZQ9 345 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 SWAP70Q9UH65 585 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 PTCH2Q9Y6C5 1203 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 ROBO3Q96MS0 1386 aa11.53□□□□□ -0.56
ACTN1-215ENST00000555616 GSPT1P15170 499 aaKnown RBP11.52□□□□□ -0.57
ACTN1-215ENST00000555616 HOXA7P31268 230 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-215ENST00000555616 GUCY1A2P33402 732 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 PSMC4P43686 418 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 GCLCP48506 637 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-215ENST00000555616 FCGRTP55899 365 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 C12orf60Q5U649 245 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 SLC44A5Q8NCS7 719 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 DDRGK1Q96HY6 314 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 KIAA1683Q9H0B3 1180 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 ASCC2Q9H1I8 757 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-215ENST00000555616 ARPP21Q9UBL0 812 aaPredicted RBP11.52□□□□□ -0.57
ACTN1-215ENST00000555616 SRRDQ9UH36 339 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 SLC4A4Q9Y6R1 1079 aa11.52□□□□□ -0.57
ACTN1-215ENST00000555616 TNRC18O15417 2968 aaPredicted RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms