RNA–Protein interactions for RNA: ENST00000555497.5

TMEM260-207, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,218 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-207ENST00000555497 KCNF1Q9H3M0 494 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 CATIPQ7Z7H3 387 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 DHX40Q8IX18 779 aaKnown RBP28.04■■■□□ 2.08
TMEM260-207ENST00000555497 TRIM5Q9C035 493 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 EIF4ENIF1Q9NRA8 985 aaKnown RBP28.04■■■□□ 2.08
TMEM260-207ENST00000555497 MKRN1Q9UHC7 482 aaKnown RBP28.04■■■□□ 2.08
TMEM260-207ENST00000555497 HPSEQ9Y251 543 aa28.04■■■□□ 2.08
TMEM260-207ENST00000555497 hCG_1642624A0A1W2PR95 340 aa28.03■■■□□ 2.08
TMEM260-207ENST00000555497 PPP2R5BQ15173 497 aa28.03■■■□□ 2.08
TMEM260-207ENST00000555497 SAFBQ15424 915 aaKnown RBP eCLIP28.03■■■□□ 2.08
TMEM260-207ENST00000555497 DIXDC1Q155Q3 683 aa28.03■■■□□ 2.08
TMEM260-207ENST00000555497 FOXP1Q9H334 677 aaPredicted RBP28.03■■■□□ 2.08
TMEM260-207ENST00000555497 ARPP21Q9UBL0 812 aaPredicted RBP28.03■■■□□ 2.08
TMEM260-207ENST00000555497 BRWD3Q6RI45 1802 aa28.03■■■□□ 2.08
TMEM260-207ENST00000555497 TRIM37O94972 964 aa28.03■■■□□ 2.08
TMEM260-207ENST00000555497 KIAA2012Q0VF49 1180 aa28.03■■■□□ 2.08
TMEM260-207ENST00000555497 C15orf52Q6ZUT6 534 aaKnown RBP28.03■■■□□ 2.08
TMEM260-207ENST00000555497 MCM9Q9NXL9 1143 aa28.03■■■□□ 2.08
TMEM260-207ENST00000555497 DDR1Q08345 913 aa28.02■■■□□ 2.08
TMEM260-207ENST00000555497 TMED8Q6PL24 325 aaPredicted RBP28.02■■■□□ 2.08
TMEM260-207ENST00000555497 JMYQ8N9B5 988 aa28.02■■■□□ 2.08
TMEM260-207ENST00000555497 SH3RF3Q8TEJ3 882 aaPredicted RBP28.02■■■□□ 2.08
TMEM260-207ENST00000555497 PDZRN4Q6ZMN7 1036 aaPredicted RBP28.02■■■□□ 2.08
TMEM260-207ENST00000555497 ZNF804AQ7Z570 1209 aa28.02■■■□□ 2.08
TMEM260-207ENST00000555497 SLC27A3Q5K4L6 730 aa28.01■■■□□ 2.07
TMEM260-207ENST00000555497 RESP18Q5W5W9 173 aa28.01■■■□□ 2.07
TMEM260-207ENST00000555497 C17orf53Q8N3J3 647 aaPredicted RBP28.01■■■□□ 2.07
TMEM260-207ENST00000555497 FAM237AA0A1B0GTK4 181 aa28■■■□□ 2.07
TMEM260-207ENST00000555497 SLC3A2P08195 630 aaKnown RBP28■■■□□ 2.07
TMEM260-207ENST00000555497 ST5P78524 1137 aa28■■■□□ 2.07
TMEM260-207ENST00000555497 VPS54Q9P1Q0 977 aa28■■■□□ 2.07
TMEM260-207ENST00000555497 V9GY48 417 aaPredicted RBP28■■■□□ 2.07
TMEM260-207ENST00000555497 SYKP43405 635 aa28■■■□□ 2.07
TMEM260-207ENST00000555497 GOLGA6L19H0YKK7 550 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 PRPF3O43395 683 aaKnown RBP27.99■■■□□ 2.07
TMEM260-207ENST00000555497 CUTAO60888 179 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 UFL1O94874 794 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 DPCR1Q3MIW9 517 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 PROM2Q8N271 834 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 NRBP1Q9UHY1 535 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 PIBF1Q8WXW3 757 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 PCDHB6Q9Y5E3 794 aa27.99■■■□□ 2.07
TMEM260-207ENST00000555497 BAZ2BQ9UIF8 2168 aaKnown RBP27.99■■■□□ 2.07
TMEM260-207ENST00000555497 DDAH1O94760 285 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 PTGS1P23219 599 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 GRIN1Q05586 938 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 C12orf60Q5U649 245 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 TMTC3Q6ZXV5 915 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 KRT27Q7Z3Y8 459 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 CEP57L1Q8IYX8 460 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 RBM17Q96I25 401 aaKnown RBP27.98■■■□□ 2.07
TMEM260-207ENST00000555497 CD209Q9NNX6 404 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 RBM28Q9NW13 759 aaKnown RBP27.98■■■□□ 2.07
TMEM260-207ENST00000555497 BIN1O00499 593 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 CALM1P0DP23 149 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 CALM2P0DP24 149 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 CALM3P0DP25 149 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 AKAP17AQ02040 695 aaKnown RBP27.98■■■□□ 2.07
TMEM260-207ENST00000555497 RCSD1Q6JBY9 416 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 AOPEPQ8N6M6 819 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 DYNLL2Q96FJ2 89 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 TIGD1Q96MW7 591 aa27.98■■■□□ 2.07
TMEM260-207ENST00000555497 FAM205CA6NFA0 338 aa27.97■■■□□ 2.07
TMEM260-207ENST00000555497 POLRMTO00411 1230 aaKnown RBP27.97■■■□□ 2.07
TMEM260-207ENST00000555497 USP5P45974 858 aa27.97■■■□□ 2.07
TMEM260-207ENST00000555497 PDE4BQ07343 736 aa27.97■■■□□ 2.07
TMEM260-207ENST00000555497 RILPL1Q5EBL4 403 aa27.97■■■□□ 2.07
TMEM260-207ENST00000555497 SARM1Q6SZW1 724 aa27.97■■■□□ 2.07
TMEM260-207ENST00000555497 SRBD1Q8N5C6 995 aaKnown RBP27.97■■■□□ 2.07
TMEM260-207ENST00000555497 PYCARDQ9ULZ3 195 aa27.97■■■□□ 2.07
TMEM260-207ENST00000555497 GOLGA6L6A8MZA4 724 aa27.96■■■□□ 2.07
TMEM260-207ENST00000555497 SPECC1Q5M775 1068 aa27.96■■■□□ 2.07
TMEM260-207ENST00000555497 KRI1Q8N9T8 703 aaKnown RBP27.96■■■□□ 2.07
TMEM260-207ENST00000555497 PHF20Q9BVI0 1012 aa27.96■■■□□ 2.07
TMEM260-207ENST00000555497 CABP5Q9NP86 173 aa27.96■■■□□ 2.07
TMEM260-207ENST00000555497 TSPY2A6NKD2 308 aa27.96■■■□□ 2.07
TMEM260-207ENST00000555497 BECN2A8MW95 431 aa27.96■■■□□ 2.07
TMEM260-207ENST00000555497 ATP2B4P23634 1241 aa27.96■■■□□ 2.07
TMEM260-207ENST00000555497 EARS2Q5JPH6 523 aaKnown RBP27.96■■■□□ 2.07
TMEM260-207ENST00000555497 PPP4CP60510 307 aa27.95■■■□□ 2.07
TMEM260-207ENST00000555497 CCDC186Q7Z3E2 898 aa27.95■■■□□ 2.07
TMEM260-207ENST00000555497 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.95■■■□□ 2.07
TMEM260-207ENST00000555497 POLLQ9UGP5 575 aa27.95■■■□□ 2.07
TMEM260-207ENST00000555497 GGA1Q9UJY5 639 aa27.95■■■□□ 2.07
TMEM260-207ENST00000555497 FBXO2Q9UK22 296 aaPredicted RBP27.95■■■□□ 2.07
TMEM260-207ENST00000555497 CNTNAP5Q8WYK1 1306 aa27.95■■■□□ 2.07
TMEM260-207ENST00000555497 TPM3P06753 285 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 ATP2B1P20020 1258 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 HOXA10P31260 410 aaPredicted RBP27.94■■■□□ 2.06
TMEM260-207ENST00000555497 RBM6P78332 1123 aaKnown RBP27.94■■■□□ 2.06
TMEM260-207ENST00000555497 GSTO1P78417 241 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 NOLC1Q14978 699 aaKnown RBP eCLIP27.94■■■□□ 2.06
TMEM260-207ENST00000555497 DRC7Q8IY82 874 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 TGFBRAP1Q8WUH2 860 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 RTFDC1Q9BY42 306 aaPredicted RBP27.94■■■□□ 2.06
TMEM260-207ENST00000555497 IL17RBQ9NRM6 502 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 IL1R1P14778 569 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 PTPREP23469 700 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 NLRP12P59046 1061 aa27.94■■■□□ 2.06
TMEM260-207ENST00000555497 LONRF3Q496Y0 759 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms