RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 RNF41Q9H4P4 317 aaPredicted RBP15.05■□□□□ -0
SYNE2-219ENST00000555323 MKNK2Q9HBH9 465 aa15.05■□□□□ -0
SYNE2-219ENST00000555323 ASNSP08243 561 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 JAG1P78504 1218 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 VGLL4Q14135 290 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 RNF20Q5VTR2 975 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 TBC1D10CQ8IV04 446 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 ZNF444Q8N0Y2 327 aaPredicted RBP15.04■□□□□ -0
SYNE2-219ENST00000555323 INCENPQ9NQS7 918 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 CSADQ9Y600 493 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 SNCAIPQ9Y6H5 919 aa15.04■□□□□ -0
SYNE2-219ENST00000555323 RASSF10A6NK89 507 aa15.03■□□□□ -0
SYNE2-219ENST00000555323 HSPA6P17066 643 aa15.03■□□□□ -0
SYNE2-219ENST00000555323 ABCB5Q2M3G0 1257 aa15.03■□□□□ -0
SYNE2-219ENST00000555323 RGMBQ6NW40 437 aa15.03■□□□□ -0
SYNE2-219ENST00000555323 SLC10A4Q96EP9 437 aa15.03■□□□□ -0
SYNE2-219ENST00000555323 CLMNQ96JQ2 1002 aa15.03■□□□□ -0
SYNE2-219ENST00000555323 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.03■□□□□ -0
SYNE2-219ENST00000555323 SPDYE5A6NIY4 337 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 E7EWF7 191 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 PRDM1O75626 825 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 AKR1B1P15121 316 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 PTPRAP18433 802 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 GUCY1A2P33402 732 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 PPATQ06203 517 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 TMEM179Q6ZVK1 233 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 ERO1BQ86YB8 467 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 STK11IPQ8N1F8 1099 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 NEDD1Q8NHV4 660 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 TBC1D2Q9BYX2 928 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 KRT23Q9C075 422 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 CNNM2Q9H8M5 875 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 CABP5Q9NP86 173 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 TCP11L1Q9NUJ3 509 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 ZBTB21Q9ULJ3 1066 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 ABT1Q9ULW3 272 aaKnown RBP15.02■□□□□ -0
SYNE2-219ENST00000555323 TAF6LQ9Y6J9 622 aa15.02■□□□□ -0
SYNE2-219ENST00000555323 IGKV6D-41A0A0C4DH26 115 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 GDF11O95390 407 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 GH2P01242 217 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 ZKSCAN1P17029 563 aaPredicted RBP15.01□□□□□ -0.01
SYNE2-219ENST00000555323 NOVP48745 357 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 TFAP4Q01664 338 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 DEFB115Q30KQ5 88 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 STOX1Q6ZVD7 989 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 RASEFQ8IZ41 740 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 CCDC102AQ96A19 550 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 IL17RAQ96F46 866 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 WDR18Q9BV38 432 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 BACH2Q9BYV9 841 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 PICK1Q9NRD5 415 aa15.01□□□□□ -0.01
SYNE2-219ENST00000555323 USP17L5A8MUK1 530 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 SHROOM1Q2M3G4 852 aaPredicted RBP15□□□□□ -0.01
SYNE2-219ENST00000555323 SIAH1Q8IUQ4 282 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 NCOA7Q8NI08 942 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 NKX2-3Q8TAU0 364 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 ESR2Q92731 530 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 KANSL2Q9H9L4 492 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 ELP3Q9H9T3 547 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 ZSWIM5Q9P217 1185 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 AFG3L2Q9Y4W6 797 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 LAMB1P07942 1786 aa15□□□□□ -0.01
SYNE2-219ENST00000555323 PLIN4Q96Q06 1357 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 NEDD4P46934 1319 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 TSPY2A6NKD2 308 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 FAM155AB1AL88 458 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-219ENST00000555323 RANBP6O60518 1105 aaKnown RBP14.99□□□□□ -0.01
SYNE2-219ENST00000555323 TSPY3P0CV98 308 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 TSPY8P0CW00 308 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 ZBTB48P10074 688 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-219ENST00000555323 MCCP23508 829 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 ZNF157P51786 506 aaPredicted RBP14.99□□□□□ -0.01
SYNE2-219ENST00000555323 TRDNQ13061 729 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 PPIL2Q13356 520 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 KRT32Q14532 448 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 SEPT2Q15019 361 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 FAM47AQ5JRC9 791 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 SPRYD7Q5W111 196 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 OPTNQ96CV9 577 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 IL17RBQ9NRM6 502 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 SNX14Q9Y5W7 946 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 ZHX2Q9Y6X8 837 aa14.99□□□□□ -0.01
SYNE2-219ENST00000555323 B4E1Z4 1266 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 MPHOSPH10O00566 681 aaKnown RBP14.98□□□□□ -0.01
SYNE2-219ENST00000555323 CXCL11O14625 94 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 KDM4AO75164 1064 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 SLC10A3P09131 477 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 GJA5P36382 358 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 ANAPC15P60006 121 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 PPP4R3BQ5MIZ7 849 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 RASAL3Q86YV0 1011 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 ZNF280CQ8ND82 737 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 MKL1Q969V6 931 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 WNK4Q96J92 1243 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 TTC14Q96N46 770 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 NEK1Q96PY6 1258 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 MTA3Q9BTC8 594 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 AS3MTQ9HBK9 375 aa14.98□□□□□ -0.01
SYNE2-219ENST00000555323 MTMR4Q9NYA4 1195 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms