RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 CBFA2T2O43439 604 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 PTPREP23469 700 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 AFMP43652 599 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 EARS2Q5JPH6 523 aaKnown RBP17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 IFIT1BQ5T764 474 aaKnown RBP17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 ENAHQ8N8S7 591 aaPredicted RBP17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 SMARCE1Q969G3 411 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 DHX58Q96C10 678 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 SHISA4Q96DD7 197 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 TMX1Q9H3N1 280 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 GNL3LQ9NVN8 582 aaKnown RBP17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 HOOK1Q9UJC3 728 aaKnown RBP17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 KLRK1P26718 216 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 TMTC2Q8N394 836 aa17.97■□□□□ 0.47
ARHGEF40-203ENST00000554514 FAM237AA0A1B0GTK4 181 aa17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 NOM1Q5C9Z4 860 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 KLHL10Q6JEL2 608 aa17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 NFE2L3Q9Y4A8 694 aa17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 TAF1P21675 1872 aa17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 BAZ2BQ9UIF8 2168 aaKnown RBP17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 NMT2O60551 498 aa17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 MDM2Q00987 491 aaPredicted RBP17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 CAVIN4Q5BKX8 364 aa17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 ZSCAN10Q96SZ4 725 aaPredicted RBP17.96■□□□□ 0.47
ARHGEF40-203ENST00000554514 LRRN4CLQ8ND94 238 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 CELF1Q92879 486 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 EPSTI1Q96J88 318 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 TFCP2L1Q9NZI6 479 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 DNAI1Q9UI46 699 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 ARAP2Q8WZ64 1704 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 DOCK2Q92608 1830 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 KDM4FA0A1W2PPD8 638 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 IGSF3O75054 1194 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 SEC23AQ15436 765 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 FAM47AQ5JRC9 791 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 VSTM4Q8IW00 320 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 COL14A1Q05707 1796 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 SLU7O95391 586 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 CATIPQ7Z7H3 387 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 RIOK1Q9BRS2 568 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 INTS13Q9NVM9 706 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 CGNQ9P2M7 1197 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 ZNF652Q9Y2D9 606 aa17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 MYH14Q7Z406 1995 aaKnown RBP17.95■□□□□ 0.46
ARHGEF40-203ENST00000554514 COL1A1P02452 1464 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 USP17L12C9JPN9 530 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 USP17L21D6R901 530 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 WNT7AO00755 349 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 STX17P56962 302 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 ZNF174Q15697 407 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 RGS22Q8NE09 1264 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 STAMQ92783 540 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 SAMSN1Q9NSI8 373 aaKnown RBP17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 AATFQ9NY61 560 aaKnown RBP eCLIP17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 ADKP55263 362 aaKnown RBP17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 SMAP1Q8IYB5 467 aaPredicted RBP17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 SRPRBQ9Y5M8 271 aaKnown RBP17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 SPATA31A1Q5TZJ5 1347 aa17.94■□□□□ 0.46
ARHGEF40-203ENST00000554514 RTL9Q8NET4 1388 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 TRIM75PA6NK02 468 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 COBLO75128 1261 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 XBP1P17861 261 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 MINPP1Q9UNW1 487 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 CEP131Q9UPN4 1083 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 BAZ2AQ9UIF9 1905 aaKnown RBP17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 MYH2Q9UKX2 1941 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 PSDA5PKW4 1024 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 KRT2P35908 639 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 SYCP1Q15431 976 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 PKN1Q16512 942 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 IQCA1Q86XH1 822 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 ZNF384Q8TF68 577 aa17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 FAM84BQ96KN1 310 aaPredicted RBP17.93■□□□□ 0.46
ARHGEF40-203ENST00000554514 A0A087X0B3 334 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 SMYD4Q8IYR2 804 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 ERO1AQ96HE7 468 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 RNF26Q9BY78 433 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 TIAM2Q8IVF5 1701 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 KIF2AO00139 706 aaPredicted RBP17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 ACTN4O43707 911 aaKnown RBP17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 CYP2D6P10635 497 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 KMT5BQ4FZB7 885 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 MTMR7Q9Y216 660 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 ERCC6LQ2NKX8 1250 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 CTR9Q6PD62 1173 aa17.92■□□□□ 0.46
ARHGEF40-203ENST00000554514 CICQ96RK0 1608 aaPredicted RBP17.91■□□□□ 0.46
ARHGEF40-203ENST00000554514 LINC00116Q8NCU8 138 aa17.91■□□□□ 0.46
ARHGEF40-203ENST00000554514 SYMPKQ92797 1274 aaKnown RBP17.91■□□□□ 0.46
ARHGEF40-203ENST00000554514 NID2Q14112 1375 aa17.91■□□□□ 0.46
ARHGEF40-203ENST00000554514 VWA3AA6NCI4 1184 aa17.91■□□□□ 0.46
ARHGEF40-203ENST00000554514 FBXO38Q6PIJ6 1188 aa17.91■□□□□ 0.46
ARHGEF40-203ENST00000554514 ZNF804BA4D1E1 1349 aa17.91■□□□□ 0.46
ARHGEF40-203ENST00000554514 PHLPP1O60346 1717 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 UBE4AQ14139 1066 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 MORC3Q14149 939 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 MED15Q96RN5 788 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 KCND1Q9NSA2 647 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 BCORQ6W2J9 1755 aa17.9■□□□□ 0.46
ARHGEF40-203ENST00000554514 MECOMQ03112 1051 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms