RNA–Protein interactions for RNA: ENST00000554453.5

ABCD4-221, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-221ENST00000554453 ANKRD13CQ8N6S4 541 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 ASCC2Q9H1I8 757 aaPredicted RBP13.49□□□□□ -0.25
ABCD4-221ENST00000554453 EHD4Q9H223 541 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 BOLA2Q9H3K6 86 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
ABCD4-221ENST00000554453 FOCADQ5VW36 1801 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 TCRBV5S4A2TA0A5A2 114 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 GOLIM4O00461 696 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 GDF11O95390 407 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 FLT3LGP49771 235 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 PLCD1P51178 756 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 IRF5Q13568 498 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 MTFR1Q15390 333 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 PXYLP1Q8TE99 480 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 P2RX7Q99572 595 aaKnown RBP13.48□□□□□ -0.25
ABCD4-221ENST00000554453 DCTPP1Q9H773 170 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 ZBTB21Q9ULJ3 1066 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 TNRC18O15417 2968 aaPredicted RBP13.48□□□□□ -0.25
ABCD4-221ENST00000554453 SIPA1L1O43166 1804 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 CEP290O15078 2479 aa13.48□□□□□ -0.25
ABCD4-221ENST00000554453 HTTP42858 3142 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 ZNF532Q9HCE3 1301 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 MYCP01106 439 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 UBXN2AP68543 259 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 MTMR2Q13614 643 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 SHROOM1Q2M3G4 852 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 CERKLQ49MI3 558 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 USP17L2Q6R6M4 530 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 SLAIN1Q8ND83 568 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 COA7Q96BR5 231 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 EDC3Q96F86 508 aaKnown RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 DNAJC2Q99543 621 aaKnown RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 HAUS7Q99871 368 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 CRNKL1Q9BZJ0 848 aaKnown RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 LRRCC1Q9C099 1032 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 PAG1Q9NWQ8 432 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 BIN2Q9UBW5 565 aaPredicted RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 ATAD5Q96QE3 1844 aa13.47□□□□□ -0.25
ABCD4-221ENST00000554453 RBBP6Q7Z6E9 1792 aaKnown RBP13.47□□□□□ -0.25
ABCD4-221ENST00000554453 MAST2Q6P0Q8 1798 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 TNPO2O14787 897 aaKnown RBP13.46□□□□□ -0.25
ABCD4-221ENST00000554453 ADCY3O60266 1144 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 GH2P01242 217 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 POLR3DP05423 398 aaPredicted RBP13.46□□□□□ -0.25
ABCD4-221ENST00000554453 GJB1P08034 283 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 GABPAQ06546 454 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 NKX2-3Q8TAU0 364 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 BCL11AQ9H165 835 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 CABP5Q9NP86 173 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 EMILIN3Q9NT22 766 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 MORF4L1Q9UBU8 362 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 GJD2Q9UKL4 321 aa13.46□□□□□ -0.25
ABCD4-221ENST00000554453 CCL5P13501 91 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 CAPN2P17655 700 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 SHMT1P34896 483 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 ADD2P35612 726 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 GJA8P48165 433 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 IRX3P78415 501 aaPredicted RBP13.45□□□□□ -0.26
ABCD4-221ENST00000554453 UBE3CQ15386 1083 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 ABCB5Q2M3G0 1257 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 RNF208Q9H0X6 261 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 DCP1AQ9NPI6 582 aaPredicted RBP13.45□□□□□ -0.26
ABCD4-221ENST00000554453 MCM9Q9NXL9 1143 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 RBPJLQ9UBG7 517 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 TAOK2Q9UL54 1235 aa13.45□□□□□ -0.26
ABCD4-221ENST00000554453 HERVK_113P62684 666 aa13.44□□□□□ -0.26
ABCD4-221ENST00000554453 Q3C1V9 767 aa13.44□□□□□ -0.26
ABCD4-221ENST00000554453 GTF3C2Q8WUA4 911 aaPredicted RBP13.44□□□□□ -0.26
ABCD4-221ENST00000554453 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.44□□□□□ -0.269e-7■■■□□ 18.5
ABCD4-221ENST00000554453 SMARCA5O60264 1052 aaPredicted RBP13.43□□□□□ -0.26
ABCD4-221ENST00000554453 SLC34A2O95436 690 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 GUCY1A2P33402 732 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 USP14P54578 494 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 SLFNL1Q499Z3 407 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 LCORLQ8N3X6 602 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 GPRC5AQ8NFJ5 357 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 SDR42E1Q8WUS8 393 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 KIAA1683Q9H0B3 1180 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 UNC93B1Q9H1C4 597 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 ARMT1Q9H993 441 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 TXNRD2Q9NNW7 524 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 ATP8A2Q9NTI2 1148 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 CENPFP49454 3210 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 LOC285556D6RIA3 1793 aa13.43□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L15C9J2P7 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L13C9JLJ4 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L11C9JVI0 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L18D6R9N7 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L22D6RA61 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L17D6RBQ6 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L19D6RCP7 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L20D6RJB6 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 PRKAB2O43741 272 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 SGPL1O95470 568 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 ELNP15502 786 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 USP17L24Q0WX57 530 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 RAB3GAP1Q15042 981 aa13.42□□□□□ -0.26
ABCD4-221ENST00000554453 ZSCAN25Q6NSZ9 544 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms