RNA–Protein interactions for RNA: ENST00000554158.1

ACTN1-212, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 571 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-212ENST00000554158 MYO5AQ9Y4I1 1855 aaKnown RBP10.02□□□□□ -0.8
ACTN1-212ENST00000554158 STK25O00506 426 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 GLRX3O76003 335 aaKnown RBP10.02□□□□□ -0.81
ACTN1-212ENST00000554158 ASNSP08243 561 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 UQCRFS1P1P0C7P4 283 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 CHRM1P11229 460 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-212ENST00000554158 SYN1P17600 705 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 MNX1P50219 401 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-212ENST00000554158 TFCP2Q12800 502 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 G3BP1Q13283 466 aaKnown RBP eCLIP10.02□□□□□ -0.814e-8■■□□□ 11.5
ACTN1-212ENST00000554158 ATF7IPQ6VMQ6 1270 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 TDHQ8IZJ6 230 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 SPATA5Q8NB90 893 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 GPRC5AQ8NFJ5 357 aa10.02□□□□□ -0.81
ACTN1-212ENST00000554158 GTF3C2Q8WUA4 911 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-212ENST00000554158 DHX36Q9H2U1 1008 aaKnown RBP10.02□□□□□ -0.81
ACTN1-212ENST00000554158 NOB1Q9ULX3 412 aaKnown RBP10.02□□□□□ -0.81
ACTN1-212ENST00000554158 COL2A1P02458 1487 aaPredicted RBP10.02□□□□□ -0.81
ACTN1-212ENST00000554158 ZNF316A6NFI3 1004 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 C19orf81C9J6K1 198 aa10.01□□□□□ -0.81
ACTN1-212ENST00000554158 SOX1O00570 391 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 GTPBP6O43824 516 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 HLA-DOAP06340 250 aa10.01□□□□□ -0.81
ACTN1-212ENST00000554158 CT47B1P0C2W7 299 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 PRKAR2AP13861 404 aaKnown RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 MAPK4P31152 587 aa10.01□□□□□ -0.81
ACTN1-212ENST00000554158 RGS2P41220 211 aa10.01□□□□□ -0.81
ACTN1-212ENST00000554158 OS9Q13438 667 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 MTMR2Q13614 643 aa10.01□□□□□ -0.81
ACTN1-212ENST00000554158 LBHD1Q9BQE6 289 aaPredicted RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 PRKAG2Q9UGJ0 569 aa10.01□□□□□ -0.81
ACTN1-212ENST00000554158 ZNF521Q96K83 1311 aa10.01□□□□□ -0.81
ACTN1-212ENST00000554158 RANBP2P49792 3224 aaKnown RBP10.01□□□□□ -0.81
ACTN1-212ENST00000554158 USP17L10C9JJH3 530 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 SLURP2P0DP57 97 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 MAGEA10P43363 369 aaPredicted RBP10□□□□□ -0.81
ACTN1-212ENST00000554158 BACE1P56817 501 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 RHBDL3P58872 404 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 CCNA1P78396 465 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 SLFN5Q08AF3 891 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 TTC39AQ5SRH9 613 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 WDR78Q5VTH9 848 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 NAA16Q6N069 864 aaPredicted RBP10□□□□□ -0.81
ACTN1-212ENST00000554158 TRIB2Q92519 343 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 NSUN4Q96CB9 384 aaKnown RBP10□□□□□ -0.81
ACTN1-212ENST00000554158 FEZ1Q99689 392 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 GDF15Q99988 308 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 PAGR1Q9BTK6 254 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 GINM1Q9NU53 330 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 HMG20BQ9P0W2 317 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 MORF4L1Q9UBU8 362 aa10□□□□□ -0.81
ACTN1-212ENST00000554158 SIPA1L1O43166 1804 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 IPO8O15397 1037 aaKnown RBP9.99□□□□□ -0.81
ACTN1-212ENST00000554158 XRCC5P13010 732 aaKnown RBP9.99□□□□□ -0.81
ACTN1-212ENST00000554158 HERVK_113P62684 666 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 LRIT3Q3SXY7 679 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 SH3D19Q5HYK7 790 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 CCDC158Q5M9N0 1113 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 TBC1D9Q6ZT07 1266 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 FOXP4Q8IVH2 680 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-212ENST00000554158 SH3RF3Q8TEJ3 882 aaPredicted RBP9.99□□□□□ -0.81
ACTN1-212ENST00000554158 TGFBRAP1Q8WUH2 860 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 MEIS3Q99687 375 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 WDR18Q9BV38 432 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 AATFQ9NY61 560 aaKnown RBP eCLIP9.99□□□□□ -0.81
ACTN1-212ENST00000554158 GJD2Q9UKL4 321 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 OGDHLQ9ULD0 1010 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 STXBP5LQ9Y2K9 1186 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 IVNS1ABPQ9Y6Y0 642 aa9.99□□□□□ -0.81
ACTN1-212ENST00000554158 ARID4AP29374 1257 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-212ENST00000554158 CNGA1P29973 690 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 HOXA7P31268 230 aaPredicted RBP9.98□□□□□ -0.81
ACTN1-212ENST00000554158 ERVK-9P63128 1117 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 ERVK-24P63145 666 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 TRIM32Q13049 653 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 MFSD14CQ5VZR4 134 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 USP17L2Q6R6M4 530 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 Q7L0L9 218 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 PLEKHH3Q7Z736 793 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 MAPKAPK5Q8IW41 473 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 P2RX7Q99572 595 aaKnown RBP9.98□□□□□ -0.81
ACTN1-212ENST00000554158 APBA2Q99767 749 aa9.98□□□□□ -0.81
ACTN1-212ENST00000554158 ZNFX1Q9P2E3 1918 aaKnown RBP9.97□□□□□ -0.81
ACTN1-212ENST00000554158 CUL9Q8IWT3 2517 aa9.97□□□□□ -0.81
ACTN1-212ENST00000554158 GDF11O95390 407 aa9.97□□□□□ -0.81
ACTN1-212ENST00000554158 GNAI2P04899 355 aa9.97□□□□□ -0.81
ACTN1-212ENST00000554158 USP5P45974 858 aa9.97□□□□□ -0.81
ACTN1-212ENST00000554158 MDM2Q00987 491 aaPredicted RBP9.97□□□□□ -0.81
ACTN1-212ENST00000554158 PI16Q6UXB8 463 aa9.97□□□□□ -0.81
ACTN1-212ENST00000554158 GPR142Q7Z601 462 aa9.97□□□□□ -0.81
ACTN1-212ENST00000554158 MSCO60682 206 aa9.96□□□□□ -0.82
ACTN1-212ENST00000554158 PRR29P0C7W0 189 aa9.96□□□□□ -0.82
ACTN1-212ENST00000554158 MCAMP43121 646 aa9.96□□□□□ -0.82
ACTN1-212ENST00000554158 USP14P54578 494 aa9.96□□□□□ -0.82
ACTN1-212ENST00000554158 ATP2B2Q01814 1243 aa9.96□□□□□ -0.82
ACTN1-212ENST00000554158 CACNB2Q08289 660 aaPredicted RBP9.96□□□□□ -0.82
ACTN1-212ENST00000554158 ZYXQ15942 572 aaKnown RBP9.96□□□□□ -0.82
ACTN1-212ENST00000554158 CERS3Q8IU89 383 aa9.96□□□□□ -0.82
ACTN1-212ENST00000554158 ARHGAP45Q92619 1136 aa9.96□□□□□ -0.82
ACTN1-212ENST00000554158 EDC3Q96F86 508 aaKnown RBP9.96□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms