RNA–Protein interactions for RNA: ENST00000553937.1

SDR39U1-207, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 3

Gene SDR39U1, Length 217 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-207ENST00000553937 SH3D19Q5HYK7 790 aa11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 METTL16Q86W50 562 aaKnown RBP11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 FOXP4Q8IVH2 680 aaPredicted RBP11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 CLASRPQ8N2M8 674 aaKnown RBP11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 ANKRD13CQ8N6S4 541 aa11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 KIF1BPQ96EK5 621 aa11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 PNMA3Q9UL41 463 aa11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 GABRQQ9UN88 632 aa11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 CEP290O15078 2479 aa11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 FRMPD3Q5JV73 1810 aa11.02□□□□□ -0.65
SDR39U1-207ENST00000553937 ALPK3Q96L96 1907 aa11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 TNPO2O14787 897 aaKnown RBP11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 SLC34A2O95436 690 aa11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 USP5P45974 858 aa11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 TTF1Q15361 905 aaPredicted RBP11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 CERS3Q8IU89 383 aa11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 DNAJC2Q99543 621 aaKnown RBP11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 RIOK1Q9BRS2 568 aaKnown RBP11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 WDR18Q9BV38 432 aa11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 ZBTB21Q9ULJ3 1066 aa11.01□□□□□ -0.65
SDR39U1-207ENST00000553937 GOLIM4O00461 696 aa11□□□□□ -0.65
SDR39U1-207ENST00000553937 IFIT2P09913 472 aaKnown RBP11□□□□□ -0.65
SDR39U1-207ENST00000553937 PDE6AP16499 860 aa11□□□□□ -0.65
SDR39U1-207ENST00000553937 BACE1P56817 501 aa11□□□□□ -0.65
SDR39U1-207ENST00000553937 PABPC4Q13310 644 aaKnown RBP eCLIP11□□□□□ -0.65
SDR39U1-207ENST00000553937 FAM110CQ1W6H9 321 aa11□□□□□ -0.65
SDR39U1-207ENST00000553937 TMED8Q6PL24 325 aaPredicted RBP11□□□□□ -0.65
SDR39U1-207ENST00000553937 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11□□□□□ -0.65
SDR39U1-207ENST00000553937 SHISA4Q96DD7 197 aa11□□□□□ -0.65
SDR39U1-207ENST00000553937 ASCC2Q9H1I8 757 aaPredicted RBP11□□□□□ -0.65
SDR39U1-207ENST00000553937 CHMP4BQ9H444 224 aaKnown RBP11□□□□□ -0.65
SDR39U1-207ENST00000553937 RLFQ13129 1914 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 A0A0G2JMZ2 1700 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 MAGEB6P1A0A0J9YX57 407 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 SMARCA5O60264 1052 aaPredicted RBP10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 RAB11FIP3O75154 756 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 CCL5P13501 91 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 ELNP15502 786 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 GCLCP48506 637 aaPredicted RBP10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 FLT3LGP49771 235 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 SLC9C2Q5TAH2 1124 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 SLAIN1Q8ND83 568 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 EDC3Q96F86 508 aaKnown RBP10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 EHD4Q9H223 541 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 GINM1Q9NU53 330 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 TMOD4Q9NZQ9 345 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 BIN2Q9UBW5 565 aaPredicted RBP10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 SERPINB13Q9UIV8 391 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 COL11A1P12107 1806 aaPredicted RBP10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 ZNF532Q9HCE3 1301 aa10.99□□□□□ -0.65
SDR39U1-207ENST00000553937 TCRBV5S4A2TA0A5A2 114 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 C19orf81C9J6K1 198 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 USP17L10C9JJH3 530 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 ADCY3O60266 1144 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 GH2P01242 217 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 UBXN2AP68543 259 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 IRX3P78415 501 aaPredicted RBP10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 TATDN1Q6P1N9 297 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 TTC6Q86TZ1 520 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 COA7Q96BR5 231 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 TAOK2Q9UL54 1235 aa10.98□□□□□ -0.65
SDR39U1-207ENST00000553937 INHAP05111 366 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 GJB1P08034 283 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 HOXA7P31268 230 aaPredicted RBP10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 PLCD1P51178 756 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 EVX2Q03828 476 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 IRF5Q13568 498 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 LCORLQ8N3X6 602 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 PXYLP1Q8TE99 480 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 SDR42E1Q8WUS8 393 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 P2RX7Q99572 595 aaKnown RBP10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 CRNKL1Q9BZJ0 848 aaKnown RBP10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 RNF208Q9H0X6 261 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 UNC93B1Q9H1C4 597 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 BOLA2Q9H3K6 86 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 PAG1Q9NWQ8 432 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 MORF4L1Q9UBU8 362 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 GREB1LQ9C091 1923 aaPredicted RBP10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 MYH4Q9Y623 1939 aa10.97□□□□□ -0.65
SDR39U1-207ENST00000553937 ZNFX1Q9P2E3 1918 aaKnown RBP10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 PEX10O60683 326 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 POLR3DP05423 398 aaPredicted RBP10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 ATP5JP18859 108 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 SHMT1P34896 483 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 GJA8P48165 433 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 HERVK_113P62684 666 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 RAB3GAP1Q15042 981 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 ZYXQ15942 572 aaKnown RBP10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 ABCB5Q2M3G0 1257 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 SLFNL1Q499Z3 407 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 CERKLQ49MI3 558 aaPredicted RBP10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 USP17L2Q6R6M4 530 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 NKX2-3Q8TAU0 364 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 FEZ1Q99689 392 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 LRRCC1Q9C099 1032 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 ARMT1Q9H993 441 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 EMILIN3Q9NT22 766 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 MCM9Q9NXL9 1143 aa10.96□□□□□ -0.65
SDR39U1-207ENST00000553937 CHGBP05060 677 aa10.95□□□□□ -0.66
SDR39U1-207ENST00000553937 ADD2P35612 726 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms