RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 ZNF646O15015 1829 aaPredicted RBP10.09□□□□□ -0.79
PSEN1-209ENST00000553855 RGS3P49796 1198 aa10.08□□□□□ -0.8
PSEN1-209ENST00000553855 MAGEB6Q8N7X4 407 aa10.08□□□□□ -0.8
PSEN1-209ENST00000553855 IDI2Q9BXS1 227 aa10.08□□□□□ -0.8
PSEN1-209ENST00000553855 ZNF341Q9BYN7 854 aa10.08□□□□□ -0.8
PSEN1-209ENST00000553855 TBC1D2Q9BYX2 928 aa10.08□□□□□ -0.8
PSEN1-209ENST00000553855 AATFQ9NY61 560 aaKnown RBP eCLIP10.08□□□□□ -0.8
PSEN1-209ENST00000553855 PAPPA2Q9BXP8 1791 aa10.08□□□□□ -0.8
PSEN1-209ENST00000553855 AOX1Q06278 1338 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 RPAP1Q9BWH6 1393 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-209ENST00000553855 CA12O43570 354 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 AOC2O75106 756 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 SLC10A3P09131 477 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 HSPA1AP0DMV8 641 aaKnown RBP10.07□□□□□ -0.8
PSEN1-209ENST00000553855 HSPA1BP0DMV9 641 aaKnown RBP10.07□□□□□ -0.8
PSEN1-209ENST00000553855 USP5P45974 858 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 SREBF2Q12772 1141 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 MAP3K11Q16584 847 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 PPP4R3BQ5MIZ7 849 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 SLC9C2Q5TAH2 1124 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 COL13A1Q5TAT6 717 aaPredicted RBP10.07□□□□□ -0.8
PSEN1-209ENST00000553855 MOB2Q70IA6 237 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 TNS4Q8IZW8 715 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 ZNF687Q8N1G0 1237 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 CCDC82Q8N4S0 544 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 CSRNP1Q96S65 589 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 HAUS7Q99871 368 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 TTC41PQ6P2S7 1318 aa10.07□□□□□ -0.8
PSEN1-209ENST00000553855 MAGEB6P1A0A0J9YX57 407 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 SPDYE5A6NIY4 337 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 RAD21O60216 631 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 USP2O75604 605 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-209ENST00000553855 GLRX3O76003 335 aaKnown RBP10.06□□□□□ -0.8
PSEN1-209ENST00000553855 HLA-DOAP06340 250 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 NEFLP07196 543 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 CENPBP07199 599 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-209ENST00000553855 MX1P20591 662 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 PPP4CP60510 307 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 IRX6P78412 446 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-209ENST00000553855 KIF23Q02241 960 aaPredicted RBP10.06□□□□□ -0.8
PSEN1-209ENST00000553855 NFIAQ12857 509 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 LDLRAD1Q5T700 205 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 RASAL3Q86YV0 1011 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 AMOTL1Q8IY63 956 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 TEPSINQ96N21 525 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 WRNIP1Q96S55 665 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 DHX36Q9H2U1 1008 aaKnown RBP10.06□□□□□ -0.8
PSEN1-209ENST00000553855 ANTXR1Q9H6X2 564 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 NDUFB9Q9Y6M9 179 aa10.06□□□□□ -0.8
PSEN1-209ENST00000553855 ECM29Q5VYK3 1845 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 WDHD1O75717 1129 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-209ENST00000553855 ZBTB48P10074 688 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-209ENST00000553855 PDE6AP16499 860 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 CTCFP49711 727 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-209ENST00000553855 INHBEP58166 350 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 RHBDL3P58872 404 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 OTUD7BQ6GQQ9 843 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 B4GALNT3Q6L9W6 998 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 MIGA2Q7L4E1 593 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 CRACR2BQ8N4Y2 399 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-209ENST00000553855 MIGA1Q8NAN2 632 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 BANK1Q8NDB2 785 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 SH3RF3Q8TEJ3 882 aaPredicted RBP10.05□□□□□ -0.8
PSEN1-209ENST00000553855 TGFBRAP1Q8WUH2 860 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 POM121Q96HA1 1249 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 CRNKL1Q9BZJ0 848 aaKnown RBP10.05□□□□□ -0.8
PSEN1-209ENST00000553855 WBP1LQ9NX94 342 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 FAM198AQ9UFP1 575 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 ZNF532Q9HCE3 1301 aa10.05□□□□□ -0.8
PSEN1-209ENST00000553855 POLR2AP24928 1970 aaKnown RBP10.05□□□□□ -0.8
PSEN1-209ENST00000553855 MANSC4A6NHS7 340 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-209ENST00000553855 ZFYP08048 801 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-209ENST00000553855 RFC5P40937 340 aa10.04□□□□□ -0.8
PSEN1-209ENST00000553855 SPRYD7Q5W111 196 aa10.04□□□□□ -0.8
PSEN1-209ENST00000553855 MAPKAPK5Q8IW41 473 aa10.04□□□□□ -0.8
PSEN1-209ENST00000553855 OSBPL5Q9H0X9 879 aaPredicted RBP10.04□□□□□ -0.8
PSEN1-209ENST00000553855 ELP3Q9H9T3 547 aa10.04□□□□□ -0.8
PSEN1-209ENST00000553855 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.04□□□□□ -0.8
PSEN1-209ENST00000553855 PICK1Q9NRD5 415 aa10.04□□□□□ -0.8
PSEN1-209ENST00000553855 FZD1Q9UP38 647 aa10.04□□□□□ -0.8
PSEN1-209ENST00000553855 PCNTO95613 3336 aa10.04□□□□□ -0.8
PSEN1-209ENST00000553855 FAM155AB1AL88 458 aaPredicted RBP10.03□□□□□ -0.8
PSEN1-209ENST00000553855 ALDH1A1P00352 501 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 DYNLL1P63167 89 aaKnown RBP10.03□□□□□ -0.8
PSEN1-209ENST00000553855 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 TTC6Q86TZ1 520 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 ERO1BQ86YB8 467 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.03□□□□□ -0.8
PSEN1-209ENST00000553855 ZNF384Q8TF68 577 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 OPTNQ96CV9 577 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 WNK4Q96J92 1243 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 FSD1Q9BTV5 496 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 LNPKQ9C0E8 428 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 DDX4Q9NQI0 724 aaKnown RBP10.03□□□□□ -0.8
PSEN1-209ENST00000553855 PI4KBQ9UBF8 816 aa10.03□□□□□ -0.8
PSEN1-209ENST00000553855 HERC5Q9UII4 1024 aaKnown RBP10.03□□□□□ -0.8
PSEN1-209ENST00000553855 SSC5DA1L4H1 1573 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 MYH2Q9UKX2 1941 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 RCCD1A6NED2 376 aa10.02□□□□□ -0.81
PSEN1-209ENST00000553855 DDTLA6NHG4 134 aaPredicted RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms