RNA–Protein interactions for RNA: ENST00000553733.1

CLMN-202, Transcript of calmin, humanhuman

TSL 4

Gene CLMN, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLMN-202ENST00000553733 HLA-DOAP06340 250 aa22.16■■□□□ 1.14
CLMN-202ENST00000553733 ASNSP08243 561 aa22.16■■□□□ 1.14
CLMN-202ENST00000553733 IFIT2P09913 472 aaKnown RBP22.16■■□□□ 1.14
CLMN-202ENST00000553733 MTFR1Q15390 333 aa22.16■■□□□ 1.14
CLMN-202ENST00000553733 NBPF11Q86T75 865 aa22.16■■□□□ 1.14
CLMN-202ENST00000553733 FOXP4Q8IVH2 680 aaPredicted RBP22.16■■□□□ 1.14
CLMN-202ENST00000553733 WDR18Q9BV38 432 aa22.16■■□□□ 1.14
CLMN-202ENST00000553733 BCL11AQ9H165 835 aa22.16■■□□□ 1.14
CLMN-202ENST00000553733 A0A0G2JMZ2 1700 aa22.16■■□□□ 1.14
CLMN-202ENST00000553733 ZNF532Q9HCE3 1301 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 USP5P45974 858 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 TTF1Q15361 905 aaPredicted RBP22.15■■□□□ 1.14
CLMN-202ENST00000553733 FAM110CQ1W6H9 321 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 SLFNL1Q499Z3 407 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 TMED8Q6PL24 325 aaPredicted RBP22.15■■□□□ 1.14
CLMN-202ENST00000553733 CERS3Q8IU89 383 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 SHISA4Q96DD7 197 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 EHD4Q9H223 541 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 AS3MTQ9HBK9 375 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 PNMA3Q9UL41 463 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 FRMPD3Q5JV73 1810 aa22.15■■□□□ 1.14
CLMN-202ENST00000553733 GREB1LQ9C091 1923 aaPredicted RBP22.14■■□□□ 1.14
CLMN-202ENST00000553733 CHGBP05060 677 aa22.14■■□□□ 1.13
CLMN-202ENST00000553733 GRK4P32298 578 aa22.14■■□□□ 1.13
CLMN-202ENST00000553733 BACE1P56817 501 aa22.14■■□□□ 1.13
CLMN-202ENST00000553733 SLC9C2Q5TAH2 1124 aa22.14■■□□□ 1.13
CLMN-202ENST00000553733 TATDN1Q6P1N9 297 aa22.14■■□□□ 1.13
CLMN-202ENST00000553733 RAET1EQ8TD07 263 aa22.14■■□□□ 1.13
CLMN-202ENST00000553733 TRIM34Q9BYJ4 488 aa22.14■■□□□ 1.13
CLMN-202ENST00000553733 ASCC2Q9H1I8 757 aaPredicted RBP22.14■■□□□ 1.13
CLMN-202ENST00000553733 CEP290O15078 2479 aa22.13■■□□□ 1.13
CLMN-202ENST00000553733 HOXD10P28358 340 aa22.13■■□□□ 1.13
CLMN-202ENST00000553733 PLCD1P51178 756 aa22.13■■□□□ 1.13
CLMN-202ENST00000553733 LCORLQ8N3X6 602 aa22.13■■□□□ 1.13
CLMN-202ENST00000553733 TMEM106CQ9BVX2 250 aa22.13■■□□□ 1.13
CLMN-202ENST00000553733 CHMP4BQ9H444 224 aaKnown RBP22.13■■□□□ 1.13
CLMN-202ENST00000553733 MAGEB6P1A0A0J9YX57 407 aa22.12■■□□□ 1.13
CLMN-202ENST00000553733 SMARCA5O60264 1052 aaPredicted RBP22.12■■□□□ 1.13
CLMN-202ENST00000553733 GH2P01242 217 aa22.12■■□□□ 1.13
CLMN-202ENST00000553733 BOLA2Q9H3K6 86 aa22.12■■□□□ 1.13
CLMN-202ENST00000553733 PAG1Q9NWQ8 432 aa22.12■■□□□ 1.13
CLMN-202ENST00000553733 SERPINB13Q9UIV8 391 aa22.12■■□□□ 1.13
CLMN-202ENST00000553733 TNPO2O14787 897 aaKnown RBP22.11■■□□□ 1.13
CLMN-202ENST00000553733 PEX10O60683 326 aa22.11■■□□□ 1.13
CLMN-202ENST00000553733 ATP5JP18859 108 aa22.11■■□□□ 1.13
CLMN-202ENST00000553733 SHMT1P34896 483 aa22.11■■□□□ 1.13
CLMN-202ENST00000553733 FLT3LGP49771 235 aa22.11■■□□□ 1.13
CLMN-202ENST00000553733 SDR42E1Q8WUS8 393 aa22.11■■□□□ 1.13
CLMN-202ENST00000553733 GINM1Q9NU53 330 aa22.11■■□□□ 1.13
CLMN-202ENST00000553733 COL11A1P12107 1806 aaPredicted RBP22.1■■□□□ 1.13
CLMN-202ENST00000553733 ADD2P35612 726 aa22.1■■□□□ 1.13
CLMN-202ENST00000553733 GABPAQ06546 454 aa22.1■■□□□ 1.13
CLMN-202ENST00000553733 HAUS7Q99871 368 aa22.1■■□□□ 1.13
CLMN-202ENST00000553733 USP17L10C9JJH3 530 aa22.09■■□□□ 1.13
CLMN-202ENST00000553733 ELNP15502 786 aa22.09■■□□□ 1.13
CLMN-202ENST00000553733 POTEEQ6S8J3 1075 aa22.09■■□□□ 1.13
CLMN-202ENST00000553733 SLAIN1Q8ND83 568 aa22.09■■□□□ 1.13
CLMN-202ENST00000553733 LRRCC1Q9C099 1032 aa22.09■■□□□ 1.13
CLMN-202ENST00000553733 TXNRD2Q9NNW7 524 aa22.09■■□□□ 1.13
CLMN-202ENST00000553733 EMILIN3Q9NT22 766 aa22.09■■□□□ 1.13
CLMN-202ENST00000553733 SLC34A2O95436 690 aa22.08■■□□□ 1.13
CLMN-202ENST00000553733 CYP2D6P10635 497 aa22.08■■□□□ 1.13
CLMN-202ENST00000553733 HOXA7P31268 230 aaPredicted RBP22.08■■□□□ 1.13
CLMN-202ENST00000553733 GUCY1A2P33402 732 aa22.08■■□□□ 1.13
CLMN-202ENST00000553733 GCLCP48506 637 aaPredicted RBP22.08■■□□□ 1.13
CLMN-202ENST00000553733 PABPC4Q13310 644 aaKnown RBP eCLIP22.08■■□□□ 1.13
CLMN-202ENST00000553733 IRF5Q13568 498 aa22.08■■□□□ 1.13
CLMN-202ENST00000553733 CRNKL1Q9BZJ0 848 aaKnown RBP22.08■■□□□ 1.13
CLMN-202ENST00000553733 ARMT1Q9H993 441 aa22.08■■□□□ 1.13
CLMN-202ENST00000553733 DCP1AQ9NPI6 582 aaPredicted RBP22.08■■□□□ 1.13
CLMN-202ENST00000553733 TMOD4Q9NZQ9 345 aa22.08■■□□□ 1.13
CLMN-202ENST00000553733 MORF4L1Q9UBU8 362 aa22.08■■□□□ 1.13
CLMN-202ENST00000553733 C19orf81C9J6K1 198 aa22.07■■□□□ 1.12
CLMN-202ENST00000553733 ADCY3O60266 1144 aa22.07■■□□□ 1.12
CLMN-202ENST00000553733 CCL5P13501 91 aa22.07■■□□□ 1.12
CLMN-202ENST00000553733 TTC6Q86TZ1 520 aa22.07■■□□□ 1.12
CLMN-202ENST00000553733 SMIM22K7EJ46 135 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 PRKAB2O43741 272 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 MBD4O95243 580 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 HERVK_113P62684 666 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 IRX3P78415 501 aaPredicted RBP22.06■■□□□ 1.12
CLMN-202ENST00000553733 SLC44A5Q8NCS7 719 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 C12orf42Q96LP6 360 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 P2RX7Q99572 595 aaKnown RBP22.06■■□□□ 1.12
CLMN-202ENST00000553733 UNC93B1Q9H1C4 597 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 MCM9Q9NXL9 1143 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 MYH4Q9Y623 1939 aa22.06■■□□□ 1.12
CLMN-202ENST00000553733 INHAP05111 366 aa22.05■■□□□ 1.12
CLMN-202ENST00000553733 ZYXQ15942 572 aaKnown RBP22.05■■□□□ 1.12
CLMN-202ENST00000553733 ABCB5Q2M3G0 1257 aa22.05■■□□□ 1.12
CLMN-202ENST00000553733 CERKLQ49MI3 558 aaPredicted RBP22.05■■□□□ 1.12
CLMN-202ENST00000553733 ACER1Q8TDN7 264 aa22.05■■□□□ 1.12
CLMN-202ENST00000553733 PXYLP1Q8TE99 480 aa22.05■■□□□ 1.12
CLMN-202ENST00000553733 ZNF236Q9UL36 1845 aa22.04■■□□□ 1.12
CLMN-202ENST00000553733 POLR3DP05423 398 aaPredicted RBP22.04■■□□□ 1.12
CLMN-202ENST00000553733 GJA8P48165 433 aa22.04■■□□□ 1.12
CLMN-202ENST00000553733 RAB3GAP1Q15042 981 aa22.04■■□□□ 1.12
CLMN-202ENST00000553733 TSHZ3Q63HK5 1081 aa22.04■■□□□ 1.12
CLMN-202ENST00000553733 USP17L2Q6R6M4 530 aa22.04■■□□□ 1.12
CLMN-202ENST00000553733 COA7Q96BR5 231 aa22.04■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms