RNA–Protein interactions for RNA: ENST00000553719.5

PSEN1-208, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-208ENST00000553719 PRKG1Q13976 671 aa21.37■■□□□ 1.01
PSEN1-208ENST00000553719 COL9A3Q14050 684 aaPredicted RBP21.37■■□□□ 1.01
PSEN1-208ENST00000553719 SHROOM1Q2M3G4 852 aaPredicted RBP21.37■■□□□ 1.01
PSEN1-208ENST00000553719 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.37■■□□□ 1.01
PSEN1-208ENST00000553719 ANGEL1Q9UNK9 670 aaKnown RBP21.37■■□□□ 1.01
PSEN1-208ENST00000553719 PHIPQ8WWQ0 1821 aa21.36■■□□□ 1.01
PSEN1-208ENST00000553719 UNCXA6NJT0 531 aa21.36■■□□□ 1.01
PSEN1-208ENST00000553719 CTNND1O60716 968 aaKnown RBP21.36■■□□□ 1.01
PSEN1-208ENST00000553719 MCCP23508 829 aa21.36■■□□□ 1.01
PSEN1-208ENST00000553719 IREB2P48200 963 aaKnown RBP21.36■■□□□ 1.01
PSEN1-208ENST00000553719 RBM25P49756 843 aaKnown RBP21.36■■□□□ 1.01
PSEN1-208ENST00000553719 ANAPC15P60006 121 aa21.36■■□□□ 1.01
PSEN1-208ENST00000553719 ADCK5Q3MIX3 580 aa21.36■■□□□ 1.01
PSEN1-208ENST00000553719 CERKLQ49MI3 558 aaPredicted RBP21.36■■□□□ 1.01
PSEN1-208ENST00000553719 CCDC17Q96LX7 622 aa21.36■■□□□ 1.01
PSEN1-208ENST00000553719 MKNK2Q9HBH9 465 aa21.36■■□□□ 1.01
PSEN1-208ENST00000553719 IGKV6D-41A0A0C4DH26 115 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 GDF11O95390 407 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 ZKSCAN1P17029 563 aaPredicted RBP21.35■■□□□ 1.01
PSEN1-208ENST00000553719 GUCY1A2P33402 732 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 MAP3K9P80192 1104 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 VGLL4Q14135 290 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 ARMC9Q7Z3E5 817 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 MB21D2Q8IYB1 491 aaPredicted RBP21.35■■□□□ 1.01
PSEN1-208ENST00000553719 CNNM2Q9H8M5 875 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 GINM1Q9NU53 330 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 ZBTB21Q9ULJ3 1066 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 SNCAIPQ9Y6H5 919 aa21.35■■□□□ 1.01
PSEN1-208ENST00000553719 KRT32Q14532 448 aa21.34■■□□□ 1.01
PSEN1-208ENST00000553719 ANKRD13AQ8IZ07 590 aa21.34■■□□□ 1.01
PSEN1-208ENST00000553719 SCYL3Q8IZE3 742 aa21.34■■□□□ 1.01
PSEN1-208ENST00000553719 C2orf69Q8N8R5 385 aa21.34■■□□□ 1.01
PSEN1-208ENST00000553719 NEDD1Q8NHV4 660 aa21.34■■□□□ 1.01
PSEN1-208ENST00000553719 ZKSCAN4Q969J2 545 aaPredicted RBP21.34■■□□□ 1.01
PSEN1-208ENST00000553719 C22orf23Q9BZE7 217 aa21.34■■□□□ 1.01
PSEN1-208ENST00000553719 KRT23Q9C075 422 aa21.34■■□□□ 1.01
PSEN1-208ENST00000553719 B4E1Z4 1266 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 UBE2Q2LH0YL09 131 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 ABCB5Q2M3G0 1257 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 FAM47AQ5JRC9 791 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 SAPCD2Q86UD0 394 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 NCOA7Q8NI08 942 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 ESR2Q92731 530 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 CLMNQ96JQ2 1002 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 TBC1D32Q96NH3 1257 aa21.33■■□□□ 1.01
PSEN1-208ENST00000553719 TMEM88BA6NKF7 163 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 KDM4AO75164 1064 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 GH2P01242 217 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 NOVP48745 357 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 ANTXR2P58335 489 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 TFAP4Q01664 338 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 TTLL12Q14166 644 aaPredicted RBP21.32■■□□□ 1
PSEN1-208ENST00000553719 TMEM179Q6ZVK1 233 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 ZNF444Q8N0Y2 327 aaPredicted RBP21.32■■□□□ 1
PSEN1-208ENST00000553719 KIF2CQ99661 725 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 TCP11L1Q9NUJ3 509 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.32■■□□□ 1
PSEN1-208ENST00000553719 TLL2Q9Y6L7 1015 aa21.32■■□□□ 1
PSEN1-208ENST00000553719 RANBP6O60518 1105 aaKnown RBP21.31■■□□□ 1
PSEN1-208ENST00000553719 ASNSP08243 561 aa21.31■■□□□ 1
PSEN1-208ENST00000553719 RRP12Q5JTH9 1297 aaKnown RBP21.31■■□□□ 1
PSEN1-208ENST00000553719 CYB5R4Q7L1T6 521 aa21.31■■□□□ 1
PSEN1-208ENST00000553719 NEK1Q96PY6 1258 aa21.31■■□□□ 1
PSEN1-208ENST00000553719 TM6SF1Q9BZW5 370 aa21.31■■□□□ 1
PSEN1-208ENST00000553719 IL17RBQ9NRM6 502 aa21.31■■□□□ 1
PSEN1-208ENST00000553719 TOMM22Q9NS69 142 aa21.31■■□□□ 1
PSEN1-208ENST00000553719 ZSWIM5Q9P217 1185 aa21.31■■□□□ 1
PSEN1-208ENST00000553719 TSPY3P0CV98 308 aa21.3■■□□□ 1
PSEN1-208ENST00000553719 TSPY8P0CW00 308 aa21.3■■□□□ 1
PSEN1-208ENST00000553719 PTPRAP18433 802 aa21.3■■□□□ 1
PSEN1-208ENST00000553719 APLP1P51693 650 aa21.3■■□□□ 1
PSEN1-208ENST00000553719 TRDNQ13061 729 aa21.3■■□□□ 1
PSEN1-208ENST00000553719 SEPT2Q15019 361 aa21.3■■□□□ 1
PSEN1-208ENST00000553719 RALYLQ86SE5 291 aaKnown RBP21.3■■□□□ 1
PSEN1-208ENST00000553719 UPF2Q9HAU5 1272 aaKnown RBP21.3■■□□□ 1
PSEN1-208ENST00000553719 SPDYE5A6NIY4 337 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 TSPY2A6NKD2 308 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 HUNKP57058 714 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 CLEC10AQ8IUN9 316 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 SIAH1Q8IUQ4 282 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 JAKMIP1Q96N16 626 aaKnown RBP21.29■■□□□ 1
PSEN1-208ENST00000553719 ZSWIM6Q9HCJ5 1215 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 CSADQ9Y600 493 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 WDR19Q8NEZ3 1342 aa21.29■■□□□ 1
PSEN1-208ENST00000553719 PTPRFP10586 1907 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 MPHOSPH10O00566 681 aaKnown RBP21.28■■□□□ 1
PSEN1-208ENST00000553719 NMT2O60551 498 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 EXOSC10Q01780 885 aaKnown RBP21.28■■□□□ 1
PSEN1-208ENST00000553719 RCSD1Q6JBY9 416 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 CCDC84Q86UT8 332 aaPredicted RBP21.28■■□□□ 1
PSEN1-208ENST00000553719 CEP95Q96GE4 821 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 HHIPL1Q96JK4 782 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 MTA3Q9BTC8 594 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 ELP3Q9H9T3 547 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 CABP5Q9NP86 173 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 CREBZFQ9NS37 354 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 MTMR4Q9NYA4 1195 aa21.28■■□□□ 1
PSEN1-208ENST00000553719 HMGB1P09429 215 aaKnown RBP21.27■■□□□ 1
PSEN1-208ENST00000553719 SEC23AQ15436 765 aa21.27■■□□□ 1
PSEN1-208ENST00000553719 CNKSR2Q8WXI2 1034 aa21.27■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms