RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 ATP2B3Q16720 1220 aa17.21■□□□□ 0.35
PRPF39-204ENST00000553605 SLC39A5Q6ZMH5 540 aa17.21■□□□□ 0.35
PRPF39-204ENST00000553605 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
PRPF39-204ENST00000553605 CWC22Q9HCG8 908 aaKnown RBP17.21■□□□□ 0.35
PRPF39-204ENST00000553605 FLRT1Q9NZU1 646 aa17.21■□□□□ 0.35
PRPF39-204ENST00000553605 ABCF2Q9UG63 623 aa17.21■□□□□ 0.35
PRPF39-204ENST00000553605 FRMPD3Q5JV73 1810 aa17.2■□□□□ 0.34
PRPF39-204ENST00000553605 RFX5P48382 616 aaPredicted RBP17.2■□□□□ 0.34
PRPF39-204ENST00000553605 RHBDL3P58872 404 aa17.2■□□□□ 0.34
PRPF39-204ENST00000553605 MAP3K12Q12852 859 aa17.2■□□□□ 0.34
PRPF39-204ENST00000553605 ATG9AQ7Z3C6 839 aa17.2■□□□□ 0.34
PRPF39-204ENST00000553605 MROH7-TTC4A0A0A0MT08 1334 aa17.2■□□□□ 0.34
PRPF39-204ENST00000553605 GPR75-ASB3A0A0A6YYF3 556 aa17.19■□□□□ 0.34
PRPF39-204ENST00000553605 C19orf81C9J6K1 198 aa17.19■□□□□ 0.34
PRPF39-204ENST00000553605 HOXD11P31277 338 aaPredicted RBP17.19■□□□□ 0.34
PRPF39-204ENST00000553605 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
PRPF39-204ENST00000553605 GJC2Q5T442 439 aaPredicted RBP17.19■□□□□ 0.34
PRPF39-204ENST00000553605 SPTY2D1Q68D10 685 aaPredicted RBP17.19■□□□□ 0.34
PRPF39-204ENST00000553605 GTF3C2Q8WUA4 911 aaPredicted RBP17.19■□□□□ 0.34
PRPF39-204ENST00000553605 ATXN2LQ8WWM7 1075 aaKnown RBP17.19■□□□□ 0.34
PRPF39-204ENST00000553605 ZBTB22O15209 634 aa17.18■□□□□ 0.34
PRPF39-204ENST00000553605 GLRX3O76003 335 aaKnown RBP17.18■□□□□ 0.34
PRPF39-204ENST00000553605 ATP2B2Q01814 1243 aa17.18■□□□□ 0.34
PRPF39-204ENST00000553605 POTEEQ6S8J3 1075 aa17.18■□□□□ 0.34
PRPF39-204ENST00000553605 WDR63Q8IWG1 891 aa17.18■□□□□ 0.34
PRPF39-204ENST00000553605 ARRDC4Q8NCT1 418 aa17.18■□□□□ 0.34
PRPF39-204ENST00000553605 RNPC3Q96LT9 517 aaKnown RBP17.18■□□□□ 0.34
PRPF39-204ENST00000553605 CEP126Q9P2H0 1117 aa17.18■□□□□ 0.34
PRPF39-204ENST00000553605 HERC5Q9UII4 1024 aaKnown RBP17.18■□□□□ 0.34
PRPF39-204ENST00000553605 ATAD5Q96QE3 1844 aa17.18■□□□□ 0.34
PRPF39-204ENST00000553605 TRIM43BA6NCK2 446 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 ASNSP08243 561 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 CCDC102BQ68D86 513 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 SH3RF1Q7Z6J0 888 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 TRIM43Q96BQ3 446 aaPredicted RBP17.17■□□□□ 0.34
PRPF39-204ENST00000553605 ASB2Q96Q27 587 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 PDLIM7Q9NR12 457 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 NDUFB9Q9Y6M9 179 aa17.17■□□□□ 0.34
PRPF39-204ENST00000553605 USP17L10C9JJH3 530 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 KBTBD13C9JR72 458 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 MAP4K4O95819 1239 aaPredicted RBP17.16■□□□□ 0.34
PRPF39-204ENST00000553605 CYP2C19P33261 490 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 MECOMQ03112 1051 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 SNX17Q15036 470 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 ADAMTS19Q8TE59 1207 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 PPM1EQ8WY54 764 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 USP44Q9H0E7 712 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 SIL1Q9H173 461 aa17.16■□□□□ 0.34
PRPF39-204ENST00000553605 RLFQ13129 1914 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 SLC15A5A6NIM6 579 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 PTPREP23469 700 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 DNAJB2P25686 324 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 CCNA1P78396 465 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 RASGRF1Q13972 1273 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 WDR78Q5VTH9 848 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 ERICH6Q7L0X2 663 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 TRPV1Q8NER1 839 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 ZNF576Q9H609 170 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 PI4KBQ9UBF8 816 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 FBXO3Q9UK99 471 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 RABGAP1Q9Y3P9 1069 aa17.15■□□□□ 0.34
PRPF39-204ENST00000553605 SALL2Q9Y467 1007 aaPredicted RBP17.15■□□□□ 0.34
PRPF39-204ENST00000553605 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-204ENST00000553605 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-204ENST00000553605 CIAO1O76071 339 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 HOXC6P09630 235 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 ADORA1P30542 326 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 EPHB4P54760 987 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 JAG1P78504 1218 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 NPLOC4Q8TAT6 608 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 ZNF384Q8TF68 577 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 UHRF1Q96T88 793 aaPredicted RBP17.14■□□□□ 0.33
PRPF39-204ENST00000553605 THEGQ9P2T0 379 aa17.14■□□□□ 0.33
PRPF39-204ENST00000553605 PDS5AQ29RF7 1337 aaKnown RBP17.14■□□□□ 0.33
PRPF39-204ENST00000553605 CNMDO75829 334 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 MYCNP04198 464 aaPredicted RBP17.13■□□□□ 0.33
PRPF39-204ENST00000553605 LDHCP07864 332 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 CYBAP13498 195 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 ITGB8P26012 769 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 C1orf53Q5VUE5 145 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 ANO1Q5XXA6 986 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 EMILIN3Q9NT22 766 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 TACC3Q9Y6A5 838 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 IVNS1ABPQ9Y6Y0 642 aa17.13■□□□□ 0.33
PRPF39-204ENST00000553605 ADCYAP1R1P41586 468 aa17.12■□□□□ 0.33
PRPF39-204ENST00000553605 GSTO1P78417 241 aa17.12■□□□□ 0.33
PRPF39-204ENST00000553605 MRPS5P82675 430 aaKnown RBP17.12■□□□□ 0.33
PRPF39-204ENST00000553605 TLE2Q04725 743 aa17.12■□□□□ 0.33
PRPF39-204ENST00000553605 FERMT2Q96AC1 680 aa17.12■□□□□ 0.33
PRPF39-204ENST00000553605 GAS2L1Q99501 681 aaPredicted RBP17.12■□□□□ 0.33
PRPF39-204ENST00000553605 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
PRPF39-204ENST00000553605 IGHA2P01877 340 aa17.11■□□□□ 0.33
PRPF39-204ENST00000553605 GRB14Q14449 540 aa17.11■□□□□ 0.33
PRPF39-204ENST00000553605 USP17L2Q6R6M4 530 aa17.11■□□□□ 0.33
PRPF39-204ENST00000553605 TEX11Q8IYF3 940 aa17.11■□□□□ 0.33
PRPF39-204ENST00000553605 TIFAQ96CG3 184 aa17.11■□□□□ 0.33
PRPF39-204ENST00000553605 GINM1Q9NU53 330 aa17.11■□□□□ 0.33
PRPF39-204ENST00000553605 USP17L15C9J2P7 530 aa17.1■□□□□ 0.33
PRPF39-204ENST00000553605 USP17L13C9JLJ4 530 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms