RNA–Protein interactions for RNA: ENST00000553486.5

ABCD4-218, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 1 (best)

Gene ABCD4, Length 1,842 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-218ENST00000553486 C15orf52Q6ZUT6 534 aaKnown RBP17.82■□□□□ 0.44
ABCD4-218ENST00000553486 BRAPQ7Z569 592 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 TXNRD3Q86VQ6 643 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 WDR66Q8TBY9 1149 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 BICD2Q8TD16 824 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 ZNF384Q8TF68 577 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 ESR2Q92731 530 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 CRNKL1Q9BZJ0 848 aaKnown RBP17.82■□□□□ 0.44
ABCD4-218ENST00000553486 NUP62CLQ9H1M0 184 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 SENP2Q9HC62 589 aa17.82■□□□□ 0.44
ABCD4-218ENST00000553486 NID2Q14112 1375 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 CAPN15O75808 1086 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 RAD17O75943 681 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 LIG1P18858 919 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 CDC27P30260 824 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 TNIP1Q15025 636 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 ZNF804AQ7Z570 1209 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 RNF214Q8ND24 703 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 PGBD1Q96JS3 809 aa17.81■□□□□ 0.44
ABCD4-218ENST00000553486 MYH2Q9UKX2 1941 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 TRAF5O00463 557 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 RCAN1P53805 252 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 UBAC1Q9BSL1 405 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 ALG1Q9BT22 464 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 ATP8A2Q9NTI2 1148 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 WBP1LQ9NX94 342 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 LRRC37AA6NMS7 1700 aa17.8■□□□□ 0.44
ABCD4-218ENST00000553486 YDJCA8MPS7 323 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 RXRAP19793 462 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 ATP2B4P23634 1241 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 PRDX5P30044 214 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 CEBPZQ03701 1054 aaKnown RBP17.79■□□□□ 0.44
ABCD4-218ENST00000553486 DZIP1Q86YF9 867 aaKnown RBP17.79■□□□□ 0.44
ABCD4-218ENST00000553486 TDRD7Q8NHU6 1098 aaKnown RBP17.79■□□□□ 0.44
ABCD4-218ENST00000553486 USP28Q96RU2 1077 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 STK36Q9NRP7 1315 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 CCDC196A0A1B0GTZ2 297 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 SSRP1Q08945 709 aaKnown RBP17.79■□□□□ 0.44
ABCD4-218ENST00000553486 NTRK3Q16288 839 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 MAP3K11Q16584 847 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 CST9Q5W186 159 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 OTUD7BQ6GQQ9 843 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 STK11IPQ8N1F8 1099 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 WASF1Q92558 559 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 FUCA2Q9BTY2 467 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 PRDM10Q9NQV6 1147 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 AATFQ9NY61 560 aaKnown RBP eCLIP17.79■□□□□ 0.44
ABCD4-218ENST00000553486 DACT1Q9NYF0 836 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 RTEL1Q9NZ71 1219 aa17.79■□□□□ 0.44
ABCD4-218ENST00000553486 ECM29Q5VYK3 1845 aa17.78■□□□□ 0.44
ABCD4-218ENST00000553486 LDHBP07195 334 aaKnown RBP17.78■□□□□ 0.44
ABCD4-218ENST00000553486 CCDC192P0DO97 292 aa17.78■□□□□ 0.44
ABCD4-218ENST00000553486 CTCFP49711 727 aaPredicted RBP17.78■□□□□ 0.44
ABCD4-218ENST00000553486 GSTO1P78417 241 aa17.78■□□□□ 0.44
ABCD4-218ENST00000553486 CTR9Q6PD62 1173 aa17.78■□□□□ 0.44
ABCD4-218ENST00000553486 CCDC144CPQ8IYA2 1237 aa17.78■□□□□ 0.44
ABCD4-218ENST00000553486 ZKSCAN3Q9BRR0 538 aa17.78■□□□□ 0.44
ABCD4-218ENST00000553486 FAM217BQ9NTX9 383 aaPredicted RBP17.78■□□□□ 0.44
ABCD4-218ENST00000553486 LAMB1P07942 1786 aa17.78■□□□□ 0.44
ABCD4-218ENST00000553486 SLC3A2P08195 630 aaKnown RBP17.77■□□□□ 0.44
ABCD4-218ENST00000553486 FGRP09769 529 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 GPSM2P81274 684 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 TRIM29Q14134 588 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 RTN1Q16799 776 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 PDLIM2Q96JY6 352 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 MYL10Q9BUA6 226 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 TNMDQ9H2S6 317 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 CLSTN2Q9H4D0 955 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 PGAP2Q9UHJ9 254 aa17.77■□□□□ 0.44
ABCD4-218ENST00000553486 FMNL1O95466 1100 aaPredicted RBP17.77■□□□□ 0.43
ABCD4-218ENST00000553486 IFNAR1P17181 557 aa17.77■□□□□ 0.43
ABCD4-218ENST00000553486 KIF23Q02241 960 aaPredicted RBP17.77■□□□□ 0.43
ABCD4-218ENST00000553486 PPP2R5BQ15173 497 aa17.77■□□□□ 0.43
ABCD4-218ENST00000553486 ZC3H15Q8WU90 426 aaKnown RBP17.77■□□□□ 0.43
ABCD4-218ENST00000553486 PHKBQ93100 1093 aa17.77■□□□□ 0.43
ABCD4-218ENST00000553486 RTN4Q9NQC3 1192 aaKnown RBP17.77■□□□□ 0.43
ABCD4-218ENST00000553486 POLLQ9UGP5 575 aa17.77■□□□□ 0.43
ABCD4-218ENST00000553486 GGA1Q9UJY5 639 aa17.77■□□□□ 0.43
ABCD4-218ENST00000553486 USP17L12C9JPN9 530 aa17.76■□□□□ 0.43
ABCD4-218ENST00000553486 USP17L21D6R901 530 aa17.76■□□□□ 0.43
ABCD4-218ENST00000553486 HIRAP54198 1017 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-218ENST00000553486 MAP2K1Q02750 393 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-218ENST00000553486 SBK1Q52WX2 424 aa17.76■□□□□ 0.43
ABCD4-218ENST00000553486 MYSM1Q5VVJ2 828 aa17.76■□□□□ 0.43
ABCD4-218ENST00000553486 TRIM22Q8IYM9 498 aa17.76■□□□□ 0.43
ABCD4-218ENST00000553486 ZNF654Q8IZM8 581 aa17.76■□□□□ 0.43
ABCD4-218ENST00000553486 DCP1AQ9NPI6 582 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-218ENST00000553486 ARPP21Q9UBL0 812 aaPredicted RBP17.76■□□□□ 0.43
ABCD4-218ENST00000553486 CNOT7Q9UIV1 285 aaKnown RBP17.76■□□□□ 0.43
ABCD4-218ENST00000553486 TNKSO95271 1327 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 C6orf229H3BNL8 230 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 NR1I2O75469 434 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 UFL1O94874 794 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 YEATS4O95619 227 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 LDHCP07864 332 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 SEC23AQ15436 765 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 KRT40Q6A162 431 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 IQCA1Q86XH1 822 aa17.75■□□□□ 0.43
ABCD4-218ENST00000553486 CCAR1Q8IX12 1150 aaKnown RBP17.75■□□□□ 0.43
ABCD4-218ENST00000553486 TRPM4Q8TD43 1214 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms