RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 CRACR2BQ8N4Y2 399 aaPredicted RBP14.87□□□□□ -0.03
SHMT2-205ENST00000553474 FANCBQ8NB91 859 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 AIFM3Q96NN9 605 aa14.87□□□□□ -0.03
SHMT2-205ENST00000553474 RXRAP19793 462 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 SHC4Q6S5L8 630 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 ZNF654Q8IZM8 581 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 CCDC150Q8NCX0 1101 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 NKX2-3Q8TAU0 364 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 RBM28Q9NW13 759 aaKnown RBP14.86□□□□□ -0.03
SHMT2-205ENST00000553474 FAM13BQ9NYF5 915 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 MROH7-TTC4A0A0A0MT08 1334 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 MAST2Q6P0Q8 1798 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 DUOX1Q9NRD9 1551 aa14.86□□□□□ -0.03
SHMT2-205ENST00000553474 KIF2AO00139 706 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-205ENST00000553474 PRKAB2O43741 272 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 MARCKSP29966 332 aaPredicted RBP14.85□□□□□ -0.03
SHMT2-205ENST00000553474 LRMPQ12912 555 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 SYCP1Q15431 976 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 CCDC144BQ3MJ40 725 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 KANK3Q6NY19 840 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 NBPF11Q86T75 865 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 CCDC144CPQ8IYA2 1237 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 CCDC34Q96HJ3 373 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 RIOK1Q9BRS2 568 aaKnown RBP14.85□□□□□ -0.03
SHMT2-205ENST00000553474 TOMM22Q9NS69 142 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 RAI14Q9P0K7 980 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 CCDC88AQ3V6T2 1871 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 KIAA1551Q9HCM1 1747 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 MYH2Q9UKX2 1941 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 SNAP23O00161 211 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 NPHP1O15259 732 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 CBFA2T2O43439 604 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 BMP15O95972 392 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 TUBB4AP04350 444 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 NFIXQ14938 502 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 SEC23AQ15436 765 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 IQCA1Q86XH1 822 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 DIS3L2Q8IYB7 885 aaKnown RBP14.85□□□□□ -0.03
SHMT2-205ENST00000553474 SETDB2Q96T68 719 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 ANKRD2Q9GZV1 360 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 TACC3Q9Y6A5 838 aa14.85□□□□□ -0.03
SHMT2-205ENST00000553474 CTIFO43310 598 aaKnown RBP14.84□□□□□ -0.03
SHMT2-205ENST00000553474 PTPREP23469 700 aa14.84□□□□□ -0.03
SHMT2-205ENST00000553474 RRP12Q5JTH9 1297 aaKnown RBP14.84□□□□□ -0.03
SHMT2-205ENST00000553474 KRBA2Q6ZNG9 492 aa14.84□□□□□ -0.03
SHMT2-205ENST00000553474 ABCF2Q9UG63 623 aa14.84□□□□□ -0.03
SHMT2-205ENST00000553474 KCNH3Q9ULD8 1083 aa14.84□□□□□ -0.03
SHMT2-205ENST00000553474 MINPP1Q9UNW1 487 aa14.84□□□□□ -0.03
SHMT2-205ENST00000553474 LAMB1P07942 1786 aa14.84□□□□□ -0.03
SHMT2-205ENST00000553474 TNKSO95271 1327 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 SKILP12757 684 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 AKAP17AQ02040 695 aaKnown RBP14.83□□□□□ -0.03
SHMT2-205ENST00000553474 NCAPHQ15003 741 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 ERFEQ4G0M1 354 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 CT47A1Q5JQC4 288 aaPredicted RBP14.83□□□□□ -0.03
SHMT2-205ENST00000553474 OLFM4Q6UX06 510 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 FBXO33Q7Z6M2 555 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 NLGN1Q8N2Q7 840 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 TRIML1Q8N9V2 468 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 MIGA1Q8NAN2 632 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 MYL10Q9BUA6 226 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 DACH1Q9UI36 760 aa14.83□□□□□ -0.03
SHMT2-205ENST00000553474 ATF5Q9Y2D1 282 aaPredicted RBP14.83□□□□□ -0.03
SHMT2-205ENST00000553474 DDAH1O94760 285 aa14.83□□□□□ -0.04
SHMT2-205ENST00000553474 MMP10P09238 476 aa14.83□□□□□ -0.04
SHMT2-205ENST00000553474 MYL5Q02045 173 aa14.83□□□□□ -0.04
SHMT2-205ENST00000553474 CATIPQ7Z7H3 387 aa14.83□□□□□ -0.04
SHMT2-205ENST00000553474 NBPF5PQ86XG9 351 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-205ENST00000553474 CNNM3Q8NE01 707 aa14.83□□□□□ -0.04
SHMT2-205ENST00000553474 FAM84BQ96KN1 310 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-205ENST00000553474 ZSCAN10Q96SZ4 725 aaPredicted RBP14.83□□□□□ -0.04
SHMT2-205ENST00000553474 INCENPQ9NQS7 918 aa14.83□□□□□ -0.04
SHMT2-205ENST00000553474 BAZ2AQ9UIF9 1905 aaKnown RBP14.82□□□□□ -0.04
SHMT2-205ENST00000553474 COL1A1P02452 1464 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-205ENST00000553474 BTBD18B2RXH4 712 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 PRPF3O43395 683 aaKnown RBP14.82□□□□□ -0.04
SHMT2-205ENST00000553474 ORC4O43929 436 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 TNNT1P13805 278 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 GTF2E1P29083 439 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-205ENST00000553474 GYG1P46976 350 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 CCZ1BP86790 482 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 CCZ1P86791 482 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-205ENST00000553474 DDR1Q08345 913 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 TPD52L1Q16890 204 aaPredicted RBP14.82□□□□□ -0.04
SHMT2-205ENST00000553474 NT5DC1Q5TFE4 455 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 NLRP3Q96P20 1036 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 ATP8A2Q9NTI2 1148 aa14.82□□□□□ -0.04
SHMT2-205ENST00000553474 SRPRBQ9Y5M8 271 aaKnown RBP14.82□□□□□ -0.04
SHMT2-205ENST00000553474 NRXN2Q9P2S2 1712 aa14.81□□□□□ -0.04
SHMT2-205ENST00000553474 IFIT1BQ5T764 474 aaKnown RBP14.81□□□□□ -0.04
SHMT2-205ENST00000553474 FILIP1Q7Z7B0 1213 aa14.81□□□□□ -0.04
SHMT2-205ENST00000553474 ADGRA1Q86SQ6 560 aa14.81□□□□□ -0.04
SHMT2-205ENST00000553474 CCDC24Q8N4L8 307 aa14.81□□□□□ -0.04
SHMT2-205ENST00000553474 SLC16A10Q8TF71 515 aa14.81□□□□□ -0.04
SHMT2-205ENST00000553474 ERCC4Q92889 916 aaPredicted RBP14.81□□□□□ -0.04
SHMT2-205ENST00000553474 TNRC6CQ9HCJ0 1690 aaKnown RBP14.81□□□□□ -0.04
SHMT2-205ENST00000553474 MINDY4BA8MYZ0 360 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 RIOK3O14730 519 aaKnown RBP14.8□□□□□ -0.04
SHMT2-205ENST00000553474 CCP110O43303 1012 aa14.8□□□□□ -0.04
SHMT2-205ENST00000553474 SFPQP23246 707 aaKnown RBP eCLIP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms