RNA–Protein interactions for RNA: ENST00000553428.2

PCNX1-204, Transcript of pecanex 1, humanhuman

TSL 5

Gene PCNX1, Length 550 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-204ENST00000553428 AGTPBP1Q9UPW5 1226 aa9.95□□□□□ -0.82
PCNX1-204ENST00000553428 SLC4A4Q9Y6R1 1079 aa9.95□□□□□ -0.82
PCNX1-204ENST00000553428 AK9Q5TCS8 1911 aa9.95□□□□□ -0.82
PCNX1-204ENST00000553428 TRIM75PA6NK02 468 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 USP17L10C9JJH3 530 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 PRKAB2O43741 272 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 SHMT1P34896 483 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 BACE1P56817 501 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 PABPC4Q13310 644 aaKnown RBP eCLIP9.94□□□□□ -0.82
PCNX1-204ENST00000553428 SLFNL1Q499Z3 407 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 CERKLQ49MI3 558 aaPredicted RBP9.94□□□□□ -0.82
PCNX1-204ENST00000553428 SBK1Q52WX2 424 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 ZMYM1Q5SVZ6 1142 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 C12orf60Q5U649 245 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 GPAT2Q6NUI2 795 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 GADL1Q6ZQY3 521 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 ABHD8Q96I13 439 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 CCDC17Q96LX7 622 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 PNMA3Q9UL41 463 aa9.94□□□□□ -0.82
PCNX1-204ENST00000553428 MYO5AQ9Y4I1 1855 aaKnown RBP9.93□□□□□ -0.82
PCNX1-204ENST00000553428 FOCADQ5VW36 1801 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 ADGRA2Q96PE1 1338 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 USP17L12C9JPN9 530 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 USP17L21D6R901 530 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 GPAA1O43292 621 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 GDF11O95390 407 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 GNRH1P01148 92 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 GH2P01242 217 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 CHGBP05060 677 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 KIF22Q14807 665 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 ABCB5Q2M3G0 1257 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 SLC4A8Q2Y0W8 1093 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 B4GALNT3Q6L9W6 998 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 CTR9Q6PD62 1173 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 C17orf99Q6UX52 265 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 PLEKHM2Q8IWE5 1019 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 TMOD4Q9NZQ9 345 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 DOCK1Q14185 1865 aa9.93□□□□□ -0.82
PCNX1-204ENST00000553428 GSG1L2A8MUP6 293 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 PATL2C9JE40 543 aaKnown RBP9.92□□□□□ -0.82
PCNX1-204ENST00000553428 USP14P54578 494 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 HMGCS2P54868 508 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 FBXO46Q6PJ61 603 aaPredicted RBP9.92□□□□□ -0.82
PCNX1-204ENST00000553428 USP17L2Q6R6M4 530 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 C16orf86Q6ZW13 317 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 CCDC84Q86UT8 332 aaPredicted RBP9.92□□□□□ -0.82
PCNX1-204ENST00000553428 C12orf42Q96LP6 360 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 NACAP1Q9BZK3 213 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 EFCC1Q9HA90 598 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 ZNF287Q9HBT7 754 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 HELLSQ9NRZ9 838 aa9.92□□□□□ -0.82
PCNX1-204ENST00000553428 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.92□□□□□ -0.82
PCNX1-204ENST00000553428 SIPA1L1O43166 1804 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 DDX60LQ5H9U9 1706 aaKnown RBP9.91□□□□□ -0.82
PCNX1-204ENST00000553428 M0R2C6 588 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 CYP2D6P10635 497 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 OSBPP22059 807 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 HOXA7P31268 230 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-204ENST00000553428 GCLCP48506 637 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-204ENST00000553428 CDK8P49336 464 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 PRMT2P55345 433 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 IRX6P78412 446 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-204ENST00000553428 JAG1P78504 1218 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 LACTBP83111 547 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-204ENST00000553428 MTMR2Q13614 643 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 TMEM179Q6ZVK1 233 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 OTOP1Q7RTM1 612 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 CD99L2Q8TCZ2 262 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 SMCR8Q8TEV9 937 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-204ENST00000553428 GTF3C2Q8WUA4 911 aaPredicted RBP9.91□□□□□ -0.82
PCNX1-204ENST00000553428 KIAA1683Q9H0B3 1180 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 TRIM17Q9Y577 477 aa9.91□□□□□ -0.82
PCNX1-204ENST00000553428 ROBO3Q96MS0 1386 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 CDK5RAP2Q96SN8 1893 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 TRIM6-TRIM34B2RNG4 842 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 HIP1O00291 1037 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 APPP05067 770 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 BCRP11274 1271 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 HOXD10P28358 340 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 GUCY1A2P33402 732 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 TDO2P48775 406 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 IRX3P78415 501 aaPredicted RBP9.9□□□□□ -0.82
PCNX1-204ENST00000553428 RAB3GAP1Q15042 981 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 IFNL3Q8IZI9 196 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 DYNLL2Q96FJ2 89 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 FEZ1Q99689 392 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 SH2D4AQ9H788 454 aa9.9□□□□□ -0.82
PCNX1-204ENST00000553428 CASP8AP2Q9UKL3 1982 aa9.9□□□□□ -0.83
PCNX1-204ENST00000553428 MPHOSPH10O00566 681 aaKnown RBP9.89□□□□□ -0.83
PCNX1-204ENST00000553428 SLC3A2P08195 630 aaKnown RBP9.89□□□□□ -0.83
PCNX1-204ENST00000553428 CYP2C8P10632 490 aa9.89□□□□□ -0.83
PCNX1-204ENST00000553428 MFAP1P55081 439 aaKnown RBP9.89□□□□□ -0.83
PCNX1-204ENST00000553428 FCGRTP55899 365 aa9.89□□□□□ -0.83
PCNX1-204ENST00000553428 SEPT2Q15019 361 aa9.89□□□□□ -0.83
PCNX1-204ENST00000553428 FAM110CQ1W6H9 321 aa9.89□□□□□ -0.83
PCNX1-204ENST00000553428 SHROOM1Q2M3G4 852 aaPredicted RBP9.89□□□□□ -0.83
PCNX1-204ENST00000553428 MCMDC2Q4G0Z9 681 aa9.89□□□□□ -0.83
PCNX1-204ENST00000553428 TREML2Q5T2D2 321 aa9.89□□□□□ -0.83
PCNX1-204ENST00000553428 SLC44A5Q8NCS7 719 aa9.89□□□□□ -0.83
PCNX1-204ENST00000553428 RILPL2Q969X0 211 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms