RNA–Protein interactions for RNA: ENST00000553154.5

CALCOCO1-222, Transcript of calcium binding and coiled-coil domain 1, humanhuman

TSL 2

Gene CALCOCO1, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO1-222ENST00000553154 IFNL1Q8IU54 200 aa12.15□□□□□ -0.46
CALCOCO1-222ENST00000553154 SLC44A5Q8NCS7 719 aa12.15□□□□□ -0.46
CALCOCO1-222ENST00000553154 RNF186Q9NXI6 227 aa12.15□□□□□ -0.46
CALCOCO1-222ENST00000553154 ZBTB21Q9ULJ3 1066 aa12.15□□□□□ -0.46
CALCOCO1-222ENST00000553154 ZMYM6O95789 1325 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 GREB1LQ9C091 1923 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 A0A0G2JLL6 359 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 CA12O43570 354 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 INHBEP58166 350 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 SREBF2Q12772 1141 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 C16orf86Q6ZW13 317 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 PRRT2Q7Z6L0 340 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 DYNLL2Q96FJ2 89 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 WDR18Q9BV38 432 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 GINM1Q9NU53 330 aa12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 ARPP21Q9UBL0 812 aaPredicted RBP12.14□□□□□ -0.47
CALCOCO1-222ENST00000553154 ADGRA2Q96PE1 1338 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 LOC285556D6RIA3 1793 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 TRIM6-TRIM34B2RNG4 842 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 PATL2C9JE40 543 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 CXCL11O14625 94 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 GTF2A2P52657 109 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 ALX1Q15699 326 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 MCMDC2Q4G0Z9 681 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 NOM1Q5C9Z4 860 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 GPAT2Q6NUI2 795 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 IFNL3Q8IZI9 196 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 FAM43AQ8N2R8 423 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 CRACR2BQ8N4Y2 399 aaPredicted RBP12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 RILPL2Q969X0 211 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 CCDC136Q96JN2 1154 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 ZCCHC17Q9NP64 241 aaKnown RBP12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 TACC3Q9Y6A5 838 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 ATAD5Q96QE3 1844 aa12.13□□□□□ -0.47
CALCOCO1-222ENST00000553154 CCDC171Q6TFL3 1326 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 PTPRFP10586 1907 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 BAZ2AQ9UIF9 1905 aaKnown RBP12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 CCL15-CCL14A0A0B4J2E2 113 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 GDF11O95390 407 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 POLR3DP05423 398 aaPredicted RBP12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 NEFLP07196 543 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 ASNSP08243 561 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 CETPP11597 493 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 SNAPC2Q13487 334 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 CCL15Q16663 113 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 BMP2KLQ5H9B9 411 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 SH3D19Q5HYK7 790 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 TBC1D2Q9BYX2 928 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 R3HDMLQ9H3Y0 253 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 PICK1Q9NRD5 415 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 SWAP70Q9UH65 585 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 ZHX2Q9Y6X8 837 aa12.12□□□□□ -0.47
CALCOCO1-222ENST00000553154 PLIN4Q96Q06 1357 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 USP17L5A8MUK1 530 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 BTBD19C9JJ37 291 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 GH2P01242 217 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 FGRP09769 529 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 HSPD1P10809 573 aaKnown RBP12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 RASA1P20936 1047 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 CHMLP26374 656 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 CDK8P49336 464 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 ANKRD23Q86SG2 305 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 SIAH1Q8IUQ4 282 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 NBPF3Q9H094 633 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 PPP4R2Q9NY27 417 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 ANAPC4Q9UJX5 808 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 RAD50Q92878 1312 aa12.11□□□□□ -0.47
CALCOCO1-222ENST00000553154 IGKV6D-41A0A0C4DH26 115 aa12.1□□□□□ -0.47
CALCOCO1-222ENST00000553154 HIP1O00291 1037 aa12.1□□□□□ -0.47
CALCOCO1-222ENST00000553154 AKR1B1P15121 316 aa12.1□□□□□ -0.47
CALCOCO1-222ENST00000553154 ZNF280CQ8ND82 737 aa12.1□□□□□ -0.47
CALCOCO1-222ENST00000553154 C12orf42Q96LP6 360 aa12.1□□□□□ -0.47
CALCOCO1-222ENST00000553154 TSKSQ9UJT2 592 aa12.1□□□□□ -0.47
CALCOCO1-222ENST00000553154 TRPA1O75762 1119 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 ALDH1A1P00352 501 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 FGAP02671 866 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 TDO2P48775 406 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 PPARAQ07869 468 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 SPP2Q13103 211 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 CRHR2Q13324 411 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 DGKZQ13574 1117 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 ABCB5Q2M3G0 1257 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 CERKLQ49MI3 558 aaPredicted RBP12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 CWC27Q6UX04 472 aaKnown RBP12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 DDRGK1Q96HY6 314 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 CCDC17Q96LX7 622 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 DIAPH3Q9NSV4 1193 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 SLC45A1Q9Y2W3 748 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 AK9Q5TCS8 1911 aa12.09□□□□□ -0.47
CALCOCO1-222ENST00000553154 A0A1W2PRG0 241 aa12.08□□□□□ -0.48
CALCOCO1-222ENST00000553154 TRIM75PA6NK02 468 aa12.08□□□□□ -0.48
CALCOCO1-222ENST00000553154 SGSM2O43147 1006 aa12.08□□□□□ -0.48
CALCOCO1-222ENST00000553154 BACE1P56817 501 aa12.08□□□□□ -0.48
CALCOCO1-222ENST00000553154 CAP1Q01518 475 aa12.08□□□□□ -0.48
CALCOCO1-222ENST00000553154 MTMR2Q13614 643 aa12.08□□□□□ -0.48
CALCOCO1-222ENST00000553154 SEPT2Q15019 361 aa12.08□□□□□ -0.48
CALCOCO1-222ENST00000553154 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms