RNA–Protein interactions for RNA: ENST00000553099.5

RAB3IP-218, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,674 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-218ENST00000553099 FSIP1Q8NA03 581 aa10.52□□□□□ -0.72
RAB3IP-218ENST00000553099 LINC00301Q8NCQ3 95 aa10.52□□□□□ -0.72
RAB3IP-218ENST00000553099 SLC44A5Q8NCS7 719 aa10.52□□□□□ -0.72
RAB3IP-218ENST00000553099 GOLPH3LQ9H4A5 285 aa10.52□□□□□ -0.72
RAB3IP-218ENST00000553099 CLSTN2Q9H4D0 955 aa10.52□□□□□ -0.72
RAB3IP-218ENST00000553099 POLR3EQ9NVU0 708 aa10.52□□□□□ -0.72
RAB3IP-218ENST00000553099 ZBTB22O15209 634 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 SPTLC2O15270 562 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 PLEKHA8P1O95397 391 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 RCAN1P53805 252 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 TFAP4Q01664 338 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 SAFBQ15424 915 aaKnown RBP eCLIP10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 ANO1Q5XXA6 986 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 POTEAQ6S8J7 498 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 NBPF11Q86T75 865 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 KCNG4Q8TDN1 519 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 FUCA2Q9BTY2 467 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 MKRN1Q9UHC7 482 aaKnown RBP10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 MTMR7Q9Y216 660 aa10.52□□□□□ -0.73
RAB3IP-218ENST00000553099 BTBD18B2RXH4 712 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 MARCKSP29966 332 aaPredicted RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 PLCD1P51178 756 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 PPP4CP60510 307 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 C2CD5Q86YS7 1000 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 SLF2Q8IX21 1173 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 DIS3L2Q8IYB7 885 aaKnown RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 CTCFLQ8NI51 663 aaPredicted RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 PIBF1Q8WXW3 757 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 PPP1R9BQ96SB3 815 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 COA1Q9GZY4 146 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 A0A1B0GVL5 298 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 KINO60870 393 aaKnown RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 YEATS4O95619 227 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 MMP1P03956 469 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 TSPY3P0CV98 308 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 TSPY8P0CW00 308 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 TYRO3Q06418 890 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 TROAPQ12815 778 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 PICALMQ13492 652 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 MRPS27Q92552 414 aaKnown RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 MXD3Q9BW11 206 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 RGS17Q9UGC6 210 aaPredicted RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 USP25Q9UHP3 1055 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 GPR75-ASB3A0A0A6YYF3 556 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 IGSF3O75054 1194 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 CALM1P0DP23 149 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 CALM2P0DP24 149 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 CALM3P0DP25 149 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 PLCG2P16885 1265 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 FAM160A1Q05DH4 1040 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 PPP2R5BQ15173 497 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 RNF26Q9BY78 433 aaPredicted RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 KAT14Q9H8E8 782 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 DBNDD1Q9H9R9 158 aa10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 RBM28Q9NW13 759 aaKnown RBP10.51□□□□□ -0.73
RAB3IP-218ENST00000553099 FLT1P17948 1338 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 RGPD3A6NKT7 1758 aaPredicted RBP10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 RGPD4Q7Z3J3 1758 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 USP17L3A6NCW0 530 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 USP17L4A6NCW7 530 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 H0YIN7 160 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 DDAH1O94760 285 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 SCNN1DP51172 638 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 SLC15A2Q16348 729 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 ADALQ6DHV7 355 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 SASS6Q6UVJ0 657 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 USP17L1Q7RTZ2 530 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 NOSTRINQ8IVI9 506 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 ZNF444Q8N0Y2 327 aaPredicted RBP10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 VPS54Q9P1Q0 977 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 STX8Q9UNK0 236 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 TTF2Q9UNY4 1162 aaKnown RBP10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 V9GY48 417 aaPredicted RBP10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 MYH8P13535 1937 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 SLX4Q8IY92 1834 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 ADAMTSL1Q8N6G6 1762 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 XBP1P17861 261 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 ATP2B1P20020 1258 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 U2AF2P26368 475 aaKnown RBP eCLIP10.5□□□□□ -0.732e-6■■□□□ 12.9
RAB3IP-218ENST00000553099 CHRNA5P30532 468 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 NR5A1Q13285 461 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 CERS3Q8IU89 383 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 STK32BQ9NY57 414 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 DAGLAQ9Y4D2 1042 aa10.5□□□□□ -0.73
RAB3IP-218ENST00000553099 FAM205AQ6ZU69 1335 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 SNW1Q13573 536 aaKnown RBP10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 ANO6Q4KMQ2 910 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 FAM43AQ8N2R8 423 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 CERS5Q8N5B7 392 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 ERCC4Q92889 916 aaPredicted RBP10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 MRVI1Q9Y6F6 885 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 FOCADQ5VW36 1801 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 NDUFA8P51970 172 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 RHBDL3P58872 404 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 RCSD1Q6JBY9 416 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 TMTC3Q6ZXV5 915 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 PNMA1Q8ND90 353 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 RGS22Q8NE09 1264 aa10.49□□□□□ -0.73
RAB3IP-218ENST00000553099 OXER1Q8TDS5 423 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms