RNA–Protein interactions for RNA: ENST00000552208.1

LSM6P2-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM6P2, Length 177 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6P2-201ENST00000552208 KCNMA1Q12791 1236 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 CCDC181Q5TID7 509 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 C12orf40Q86WS4 652 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 JAMLQ86YT9 394 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 SLFN12Q8IYM2 578 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 MFSD3Q96ES6 412 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 IER2Q9BTL4 223 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 FAM126AQ9BYI3 521 aaPredicted RBP5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 WNT10AQ9GZT5 417 aa5.67□□□□□ -1.5
LSM6P2-201ENST00000552208 KRTAP9-6A0A140TA67 174 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 LOC100289279A0A1B0GTE1 492 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 A0A1W2PQU0 124 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 PGRP06401 933 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 VSIG8P0DPA2 414 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 EPXP11678 715 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 NTF4P34130 210 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 GMPRP36959 345 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 STAT3P40763 770 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 ERVK-24P63145 666 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 CBX2Q14781 532 aaPredicted RBP5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 SETDB1Q15047 1291 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 C21orf62-AS1Q17RA5 79 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 FAM117BQ6P1L5 589 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 SLCO4C1Q6ZQN7 724 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 MCATQ8IVS2 390 aaKnown RBP5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 NIM1KQ8IY84 436 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 GPR161Q8N6U8 529 aaKnown RBP5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 PRPF38AQ8NAV1 312 aaKnown RBP5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 KLHL23Q8NBE8 558 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 GALNT11Q8NCW6 608 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 SLC16A10Q8TF71 515 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 ELMO3Q96BJ8 720 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 EXOC2Q96KP1 924 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 WDR18Q9BV38 432 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 CARD10Q9BWT7 1032 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 JPH1Q9HDC5 661 aaPredicted RBP5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 MBIPQ9NS73 344 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 CHPF2Q9P2E5 772 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 NSFL1CQ9UNZ2 370 aaKnown RBP5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 HIF3AQ9Y2N7 669 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 ATP8A1Q9Y2Q0 1164 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 SUGT1Q9Y2Z0 365 aa5.66□□□□□ -1.5
LSM6P2-201ENST00000552208 H3BM21 787 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 RGS13O14921 159 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 ADAM11O75078 769 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 ALAS2P22557 587 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 POLR2BP30876 1174 aaKnown RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 CDKN1CP49918 316 aaPredicted RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 ZNF143P52747 638 aaPredicted RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 PMS1P54277 932 aaKnown RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 PABPC4Q13310 644 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 GNPTABQ3T906 1256 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 ZBTB37Q5TC79 503 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 PPFIBP1Q86W92 1011 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 MRPL41Q8IXM3 137 aaKnown RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 DHX37Q8IY37 1157 aaKnown RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 TMEM192Q8IY95 271 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 GOLGA6L1Q8N7Z2 621 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 ZNF513Q8N8E2 541 aaPredicted RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 ARHGEF4Q9NR80 690 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 TJP2Q9UDY2 1190 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 KLHL3Q9UH77 587 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 GDF2Q9UK05 429 aaPredicted RBP5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 FAN1Q9Y2M0 1017 aa5.65□□□□□ -1.5
LSM6P2-201ENST00000552208 PRAMEF27A3QJZ7 478 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 PLD2O14939 933 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 FANCGO15287 622 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 AOC2O75106 756 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 UBOX5O94941 541 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 S100BP04271 92 aaPredicted RBP5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 L1CAMP32004 1257 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 GSK3AP49840 483 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 COL9A3Q14050 684 aaPredicted RBP5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 PDE3AQ14432 1141 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 BBS9Q3SYG4 887 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 FNDC3BQ53EP0 1204 aaKnown RBP5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 MSL1Q68DK7 614 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 C1orf229Q6ZS94 237 aaPredicted RBP5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 RNF180Q86T96 592 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 TMEM87BQ96K49 555 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 KIF2CQ99661 725 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 DHRS4Q9BTZ2 278 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 CAAP1Q9H8G2 361 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 NCOA5Q9HCD5 579 aaKnown RBP5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 PRDM6Q9NQX0 595 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 SLC52A1Q9NWF4 448 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 SUCOQ9UBS9 1254 aaKnown RBP5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 CSADQ9Y600 493 aa5.64□□□□□ -1.51
LSM6P2-201ENST00000552208 FAM86C2PA6NEL3 165 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 GSG1L2A8MUP6 293 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 DDX3YO15523 660 aaKnown RBP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 LILRB5O75023 590 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 SLFN14P0C7P3 912 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 MYCLP1P12525 358 aaPredicted RBP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 RAG1P15918 1043 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 YARSP54577 528 aaKnown RBP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 HNRNPUQ00839 825 aaKnown RBP eCLIP5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 PPM1JQ5JR12 505 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 FAM209AQ5JX71 171 aa5.63□□□□□ -1.51
LSM6P2-201ENST00000552208 SLC6A19Q695T7 634 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms