RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 ENTPD3O75355 529 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 HERVK_113P62684 666 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 TLE2Q04725 743 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 BEND3Q5T5X7 828 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 ANO1Q5XXA6 986 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 GPRC5AQ8NFJ5 357 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 MYH2Q9UKX2 1941 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 TRANK1O15050 2925 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 USP34Q70CQ2 3546 aa12.93□□□□□ -0.34
SLC48A1-209ENST00000552003 F6X3S4 739 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 GPR37L1O60883 481 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 FGFR2P21802 821 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 CYP2C19P33261 490 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 JAG1P78504 1218 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 CAVIN4Q5BKX8 364 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 C16orf59Q7L2K0 433 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 PLEKHH3Q7Z736 793 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 NPLOC4Q8TAT6 608 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 GBF1Q92538 1859 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 TSR2Q969E8 191 aaKnown RBP12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 FERMT2Q96AC1 680 aa12.92□□□□□ -0.34
SLC48A1-209ENST00000552003 BRWD1Q9NSI6 2320 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 SMCHD1A6NHR9 2005 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 UTYO14607 1347 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 MROH5Q6ZUA9 1318 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 CNMDO75829 334 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 IGFBP4P22692 258 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 CNGA1P29973 690 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 MAPK4P31152 587 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 HOXA7P31268 230 aaPredicted RBP12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 ADCYAP1R1P41586 468 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 ERVK-9P63128 1117 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 ERVK-24P63145 666 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 MAP2K5Q13163 448 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 C1orf53Q5VUE5 145 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 ZSCAN29Q8IWY8 852 aaPredicted RBP12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 EDC3Q96F86 508 aaKnown RBP12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 STK31Q9BXU1 1019 aa12.91□□□□□ -0.34
SLC48A1-209ENST00000552003 KIAA0355O15063 1070 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 PDE8BO95263 885 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 CYBAP13498 195 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 PABPC4Q13310 644 aaKnown RBP eCLIP12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 FKBP5Q13451 457 aaPredicted RBP12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 SHROOM1Q2M3G4 852 aaPredicted RBP12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 RASIP1Q5U651 963 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 IL27Q8NEV9 243 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 SUCLG2Q96I99 432 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 CD320Q9NPF0 282 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 CFAP54Q96N23 3096 aa12.9□□□□□ -0.34
SLC48A1-209ENST00000552003 GRM8O00222 908 aa12.89□□□□□ -0.35
SLC48A1-209ENST00000552003 TBC1D12O60347 775 aa12.89□□□□□ -0.35
SLC48A1-209ENST00000552003 PICALMQ13492 652 aa12.89□□□□□ -0.35
SLC48A1-209ENST00000552003 MTMR2Q13614 643 aa12.89□□□□□ -0.35
SLC48A1-209ENST00000552003 MFSD14CQ5VZR4 134 aa12.89□□□□□ -0.35
SLC48A1-209ENST00000552003 KLHDC4Q8TBB5 520 aa12.89□□□□□ -0.35
SLC48A1-209ENST00000552003 WDR66Q8TBY9 1149 aa12.89□□□□□ -0.35
SLC48A1-209ENST00000552003 GAKO14976 1311 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 APAF1O14727 1248 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 TLL1O43897 1013 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 MSCO60682 206 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 CLTBP09497 229 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 IRX3P78415 501 aaPredicted RBP12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 FPGSQ05932 587 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 METTL24Q5JXM2 366 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 PAGR1Q9BTK6 254 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 OSBPL5Q9H0X9 879 aaPredicted RBP12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 TACC3Q9Y6A5 838 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 SIPA1L1O43166 1804 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 LRRC37A2A6NM11 1700 aa12.88□□□□□ -0.35
SLC48A1-209ENST00000552003 ZDBF2Q9HCK1 2354 aa12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 HOXC6P09630 235 aa12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 CAP2P40123 477 aa12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 LRRC41Q15345 812 aa12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 TWISTNBQ3B726 338 aaPredicted RBP12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 ARRDC4Q8NCT1 418 aa12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 YBX2Q9Y2T7 364 aaKnown RBP12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 KIF16BQ96L93 1317 aa12.87□□□□□ -0.35
SLC48A1-209ENST00000552003 USP17L5A8MUK1 530 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 KBTBD13C9JR72 458 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 SMIM22K7EJ46 135 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 LDHBP07195 334 aaKnown RBP12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 RAG1P15918 1043 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 PTPREP23469 700 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 BACE1P56817 501 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 RHBDL3P58872 404 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 NHLH1Q02575 133 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 FAAP100Q0VG06 881 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 TMEM240Q5SV17 173 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 PRAMEF19Q5SWL8 479 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 WDR18Q9BV38 432 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 CHMP4AQ9BY43 222 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 CACNA1FO60840 1977 aa12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 MYBBP1AQ9BQG0 1328 aaKnown RBP12.86□□□□□ -0.35
SLC48A1-209ENST00000552003 ZNF318Q5VUA4 2279 aa12.85□□□□□ -0.35
SLC48A1-209ENST00000552003 ERC2O15083 957 aa12.85□□□□□ -0.35
SLC48A1-209ENST00000552003 ATP2B2Q01814 1243 aa12.85□□□□□ -0.35
SLC48A1-209ENST00000552003 CCDC129Q6ZRS4 1044 aa12.85□□□□□ -0.35
SLC48A1-209ENST00000552003 ANKRD44Q8N8A2 993 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms