RNA–Protein interactions for RNA: ENST00000551567.1

TROAP-216, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 3

Gene TROAP, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-216ENST00000551567 WDR18Q9BV38 432 aa28.06■■■□□ 2.08
TROAP-216ENST00000551567 BIN2Q9UBW5 565 aaPredicted RBP28.06■■■□□ 2.08
TROAP-216ENST00000551567 ZBTB21Q9ULJ3 1066 aa28.06■■■□□ 2.08
TROAP-216ENST00000551567 GOLIM4O00461 696 aa28.05■■■□□ 2.08
TROAP-216ENST00000551567 TNPO2O14787 897 aaKnown RBP28.05■■■□□ 2.08
TROAP-216ENST00000551567 PABPC4Q13310 644 aaKnown RBP eCLIP28.05■■■□□ 2.081e-9■□□□□ 11
TROAP-216ENST00000551567 ASCC2Q9H1I8 757 aaPredicted RBP28.05■■■□□ 2.08
TROAP-216ENST00000551567 RAB11FIP3O75154 756 aa28.04■■■□□ 2.08
TROAP-216ENST00000551567 PDE6AP16499 860 aa28.04■■■□□ 2.08
TROAP-216ENST00000551567 BACE1P56817 501 aa28.04■■■□□ 2.08
TROAP-216ENST00000551567 FAM110CQ1W6H9 321 aa28.04■■■□□ 2.08
TROAP-216ENST00000551567 TMED8Q6PL24 325 aaPredicted RBP28.04■■■□□ 2.08
TROAP-216ENST00000551567 RIOK1Q9BRS2 568 aaKnown RBP28.04■■■□□ 2.08
TROAP-216ENST00000551567 DOCK3Q8IZD9 2030 aa28.04■■■□□ 2.08
TROAP-216ENST00000551567 MAGEB6P1A0A0J9YX57 407 aa28.03■■■□□ 2.08
TROAP-216ENST00000551567 FLT3LGP49771 235 aa28.03■■■□□ 2.08
TROAP-216ENST00000551567 SLC9C2Q5TAH2 1124 aa28.03■■■□□ 2.08
TROAP-216ENST00000551567 PPIL4Q8WUA2 492 aaKnown RBP eCLIP28.03■■■□□ 2.08
TROAP-216ENST00000551567 TMOD4Q9NZQ9 345 aa28.03■■■□□ 2.08
TROAP-216ENST00000551567 SLAIN1Q8ND83 568 aa28.02■■■□□ 2.08
TROAP-216ENST00000551567 EDC3Q96F86 508 aaKnown RBP28.02■■■□□ 2.08
TROAP-216ENST00000551567 GINM1Q9NU53 330 aa28.02■■■□□ 2.08
TROAP-216ENST00000551567 ZNF532Q9HCE3 1301 aa28.01■■■□□ 2.07
TROAP-216ENST00000551567 SLC34A2O95436 690 aa28.01■■■□□ 2.07
TROAP-216ENST00000551567 CCL5P13501 91 aa28.01■■■□□ 2.07
TROAP-216ENST00000551567 GCLCP48506 637 aaPredicted RBP28.01■■■□□ 2.07
TROAP-216ENST00000551567 PDE3AQ14432 1141 aa28.01■■■□□ 2.07
TROAP-216ENST00000551567 SERPINB13Q9UIV8 391 aa28.01■■■□□ 2.07
TROAP-216ENST00000551567 USP17L10C9JJH3 530 aa28■■■□□ 2.07
TROAP-216ENST00000551567 ADCY3O60266 1144 aa28■■■□□ 2.07
TROAP-216ENST00000551567 GH2P01242 217 aa28■■■□□ 2.07
TROAP-216ENST00000551567 ELNP15502 786 aa28■■■□□ 2.07
TROAP-216ENST00000551567 UBXN2AP68543 259 aa28■■■□□ 2.07
TROAP-216ENST00000551567 IRX3P78415 501 aaPredicted RBP28■■■□□ 2.07
TROAP-216ENST00000551567 COA7Q96BR5 231 aa28■■■□□ 2.07
TROAP-216ENST00000551567 EHD4Q9H223 541 aa28■■■□□ 2.07
TROAP-216ENST00000551567 TAOK2Q9UL54 1235 aa28■■■□□ 2.07
TROAP-216ENST00000551567 MYH7P12883 1935 aa27.99■■■□□ 2.07
TROAP-216ENST00000551567 TTC6Q86TZ1 520 aa27.99■■■□□ 2.07
TROAP-216ENST00000551567 SHISA4Q96DD7 197 aa27.99■■■□□ 2.07
TROAP-216ENST00000551567 CRNKL1Q9BZJ0 848 aaKnown RBP27.99■■■□□ 2.07
TROAP-216ENST00000551567 C19orf81C9J6K1 198 aa27.98■■■□□ 2.07
TROAP-216ENST00000551567 TATDN1Q6P1N9 297 aa27.98■■■□□ 2.07
TROAP-216ENST00000551567 RNF208Q9H0X6 261 aa27.98■■■□□ 2.07
TROAP-216ENST00000551567 BOLA2Q9H3K6 86 aa27.98■■■□□ 2.07
TROAP-216ENST00000551567 PAG1Q9NWQ8 432 aa27.98■■■□□ 2.07
TROAP-216ENST00000551567 TCRBV5S4A2TA0A5A2 114 aa27.97■■■□□ 2.07
TROAP-216ENST00000551567 PLCD1P51178 756 aa27.97■■■□□ 2.07
TROAP-216ENST00000551567 POLR3DP05423 398 aaPredicted RBP27.96■■■□□ 2.07
TROAP-216ENST00000551567 HOXA7P31268 230 aaPredicted RBP27.96■■■□□ 2.07
TROAP-216ENST00000551567 LCORLQ8N3X6 602 aa27.96■■■□□ 2.07
TROAP-216ENST00000551567 P2RX7Q99572 595 aaKnown RBP27.96■■■□□ 2.07
TROAP-216ENST00000551567 UNC93B1Q9H1C4 597 aa27.96■■■□□ 2.07
TROAP-216ENST00000551567 SMARCA5O60264 1052 aaPredicted RBP27.95■■■□□ 2.06
TROAP-216ENST00000551567 INHAP05111 366 aa27.95■■■□□ 2.06
TROAP-216ENST00000551567 ATP5JP18859 108 aa27.95■■■□□ 2.06
TROAP-216ENST00000551567 IRF5Q13568 498 aa27.95■■■□□ 2.06
TROAP-216ENST00000551567 RAB3GAP1Q15042 981 aa27.95■■■□□ 2.06
TROAP-216ENST00000551567 ZYXQ15942 572 aaKnown RBP27.95■■■□□ 2.06
TROAP-216ENST00000551567 CERKLQ49MI3 558 aaPredicted RBP27.95■■■□□ 2.06
TROAP-216ENST00000551567 SDR42E1Q8WUS8 393 aa27.95■■■□□ 2.06
TROAP-216ENST00000551567 LRRCC1Q9C099 1032 aa27.95■■■□□ 2.06
TROAP-216ENST00000551567 PLXNB2O15031 1838 aa27.95■■■□□ 2.06
TROAP-216ENST00000551567 MYH8P13535 1937 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 PEX10O60683 326 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 GJB1P08034 283 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 SHMT1P34896 483 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 HERVK_113P62684 666 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 EVX2Q03828 476 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 ABCB5Q2M3G0 1257 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 SLFNL1Q499Z3 407 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 USP17L2Q6R6M4 530 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 NKX2-3Q8TAU0 364 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 PXYLP1Q8TE99 480 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 FEZ1Q99689 392 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 EMILIN3Q9NT22 766 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 MCM9Q9NXL9 1143 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 MORF4L1Q9UBU8 362 aa27.94■■■□□ 2.06
TROAP-216ENST00000551567 BAZ2AQ9UIF9 1905 aaKnown RBP27.94■■■□□ 2.06
TROAP-216ENST00000551567 GJA8P48165 433 aa27.93■■■□□ 2.06
TROAP-216ENST00000551567 ARMT1Q9H993 441 aa27.93■■■□□ 2.06
TROAP-216ENST00000551567 HAUS7Q99871 368 aa27.92■■■□□ 2.06
TROAP-216ENST00000551567 TXNRD2Q9NNW7 524 aa27.92■■■□□ 2.06
TROAP-216ENST00000551567 DCP1AQ9NPI6 582 aaPredicted RBP27.92■■■□□ 2.06
TROAP-216ENST00000551567 MBD4O95243 580 aa27.91■■■□□ 2.06
TROAP-216ENST00000551567 ADD2P35612 726 aa27.91■■■□□ 2.06
TROAP-216ENST00000551567 U2AF1L4Q8WU68 220 aaKnown RBP27.91■■■□□ 2.06
TROAP-216ENST00000551567 DDX24Q9GZR7 859 aaKnown RBP eCLIP27.91■■■□□ 2.06
TROAP-216ENST00000551567 CABP5Q9NP86 173 aa27.91■■■□□ 2.06
TROAP-216ENST00000551567 CHGBP05060 677 aa27.9■■■□□ 2.06
TROAP-216ENST00000551567 CYP2D6P10635 497 aa27.9■■■□□ 2.06
TROAP-216ENST00000551567 GABPAQ06546 454 aa27.9■■■□□ 2.06
TROAP-216ENST00000551567 ACER1Q8TDN7 264 aa27.9■■■□□ 2.06
TROAP-216ENST00000551567 CEP290O15078 2479 aa27.89■■■□□ 2.06
TROAP-216ENST00000551567 GPRC5AQ8NFJ5 357 aa27.89■■■□□ 2.06
TROAP-216ENST00000551567 PAGR1Q9BTK6 254 aa27.89■■■□□ 2.06
TROAP-216ENST00000551567 PRKAB2O43741 272 aa27.88■■■□□ 2.05
TROAP-216ENST00000551567 GCC1Q96CN9 775 aa27.88■■■□□ 2.05
TROAP-216ENST00000551567 C12orf42Q96LP6 360 aa27.88■■■□□ 2.05
TROAP-216ENST00000551567 RBPJLQ9UBG7 517 aa27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 95.6 ms