RNA–Protein interactions for RNA: ENST00000551245.5

TROAP-215, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 2,771 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-215ENST00000551245 CCDC196A0A1B0GTZ2 297 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 PRDM1O75626 825 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 IFNAR1P17181 557 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 TERF1P54274 439 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 USP48Q86UV5 1035 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 GPT2Q8TD30 523 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 CNPY2Q9Y2B0 182 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 ZBTB7AO95365 584 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 POLR3DP05423 398 aaPredicted RBP13.56□□□□□ -0.24
TROAP-215ENST00000551245 CALM1P0DP23 149 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 CALM2P0DP24 149 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 CALM3P0DP25 149 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 DNM1Q05193 864 aaKnown RBP13.56□□□□□ -0.24
TROAP-215ENST00000551245 APOBEC3HQ6NTF7 200 aaKnown RBP13.56□□□□□ -0.24
TROAP-215ENST00000551245 C16orf86Q6ZW13 317 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 RAB11FIP4Q86YS3 637 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 PDLIM2Q96JY6 352 aa13.56□□□□□ -0.24
TROAP-215ENST00000551245 MYH6P13533 1939 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 DDAH1O94760 285 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 PLCD1P51178 756 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 RTN1Q16799 776 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 IFIT1BQ5T764 474 aaKnown RBP13.55□□□□□ -0.24
TROAP-215ENST00000551245 FANCBQ8NB91 859 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.55□□□□□ -0.24
TROAP-215ENST00000551245 PIM2Q9P1W9 311 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 MYH8P13535 1937 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 ELP1O95163 1332 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 PPIP5K2O43314 1243 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 WDHD1O75717 1129 aaPredicted RBP13.55□□□□□ -0.24
TROAP-215ENST00000551245 FMNL1O95466 1100 aaPredicted RBP13.55□□□□□ -0.24
TROAP-215ENST00000551245 CRKP46108 304 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 ATL3Q6DD88 541 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 FBXO18Q8NFZ0 1043 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 SGIP1Q9BQI5 828 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 SERPINA10Q9UK55 444 aa13.55□□□□□ -0.24
TROAP-215ENST00000551245 F8W031 263 aaPredicted RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 ZNF500O60304 480 aaPredicted RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 RXRAP19793 462 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 KRT85P78386 507 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 CATIPQ7Z7H3 387 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 FERMT3Q86UX7 667 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 DGKHQ86XP1 1220 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 DYNLL2Q96FJ2 89 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 MYL10Q9BUA6 226 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 USP40Q9NVE5 1235 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 SAP30BPQ9UHR5 308 aaKnown RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 YDJCA8MPS7 323 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 NPM3O75607 178 aaKnown RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 IARSP41252 1262 aaKnown RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 TROAPQ12815 778 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 CDC42EP5Q6NZY7 148 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 C8orf76Q96K31 380 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 TAOK2Q9UL54 1235 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 TSPY2A6NKD2 308 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 RASA1P20936 1047 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 SCNN1DP51172 638 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 FOXD4L6Q3SYB3 417 aaPredicted RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 FAM47AQ5JRC9 791 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 RCSD1Q6JBY9 416 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 FOXD4L3Q6VB84 417 aaPredicted RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 NBPF11Q86T75 865 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 MAP3K14Q99558 947 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 MKNK2Q9HBH9 465 aa13.54□□□□□ -0.24
TROAP-215ENST00000551245 RBM28Q9NW13 759 aaKnown RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 ATF5Q9Y2D1 282 aaPredicted RBP13.54□□□□□ -0.24
TROAP-215ENST00000551245 MYO3BQ8WXR4 1341 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 COL4A5P29400 1685 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 CDK8P49336 464 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 TFAP4Q01664 338 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 SSRP1Q08945 709 aaKnown RBP13.53□□□□□ -0.24
TROAP-215ENST00000551245 TTC6Q86TZ1 520 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 WASF1Q92558 559 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 UPF1Q92900 1129 aaKnown RBP eCLIP13.53□□□□□ -0.24
TROAP-215ENST00000551245 SCAND2PQ9GZW5 306 aaPredicted RBP13.53□□□□□ -0.24
TROAP-215ENST00000551245 FAM13BQ9NYF5 915 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 CD2APQ9Y5K6 639 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 UBE2HP62256 183 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 GABPAQ06546 454 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 LRSAM1Q6UWE0 723 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 CCDC144CPQ8IYA2 1237 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 ZNF444Q8N0Y2 327 aaPredicted RBP13.53□□□□□ -0.24
TROAP-215ENST00000551245 CRACR2BQ8N4Y2 399 aaPredicted RBP13.53□□□□□ -0.24
TROAP-215ENST00000551245 GDPD2Q9HCC8 539 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 IL17RBQ9NRM6 502 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 TMEM63CQ9P1W3 806 aa13.53□□□□□ -0.24
TROAP-215ENST00000551245 SYCE3A1L190 88 aa13.52□□□□□ -0.24
TROAP-215ENST00000551245 ALG1Q9BT22 464 aa13.52□□□□□ -0.24
TROAP-215ENST00000551245 DDX4Q9NQI0 724 aaKnown RBP13.52□□□□□ -0.24
TROAP-215ENST00000551245 SIPA1L1O43166 1804 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 PLIN4Q96Q06 1357 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 GREB1LQ9C091 1923 aaPredicted RBP13.52□□□□□ -0.25
TROAP-215ENST00000551245 VIL1P09327 827 aaKnown RBP13.52□□□□□ -0.25
TROAP-215ENST00000551245 NOVP48745 357 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 R3HDM1Q15032 1099 aaKnown RBP13.52□□□□□ -0.25
TROAP-215ENST00000551245 DALRD3Q5D0E6 543 aaKnown RBP13.52□□□□□ -0.25
TROAP-215ENST00000551245 KIAA0825Q8IV33 1275 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 NEDD1Q8NHV4 660 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 PHKBQ93100 1093 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 IDI2Q9BXS1 227 aa13.52□□□□□ -0.25
TROAP-215ENST00000551245 OSBPL5Q9H0X9 879 aaPredicted RBP13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms