RNA–Protein interactions for RNA: ENST00000550587.5

DEPDC4-209, Transcript of DEP domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene DEPDC4, Length 1,165 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-209ENST00000550587 CWC25Q9NXE8 425 aaPredicted RBP7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 LRRFIP2Q9Y608 721 aaKnown RBP7.62□□□□□ -1.19
DEPDC4-209ENST00000550587 CDC14CA4D256 554 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 LILRA1O75019 489 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 AOC2O75106 756 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 HUNKP57058 714 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 NBPF20Q3BBV1 942 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 RNF217Q8TC41 542 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 GLIS2Q9BZE0 524 aaPredicted RBP7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 ZC3H12CQ9C0D7 883 aaKnown RBP7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 PGAP2Q9UHJ9 254 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 SNED1Q8TER0 1413 aa7.61□□□□□ -1.19
DEPDC4-209ENST00000550587 ADH1AP07327 375 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 ITGA6P23229 1130 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 GSK3AP49840 483 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 CASP7P55210 303 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 NUCB1Q02818 461 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 FMR1Q06787 632 aaKnown RBP eCLIP7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 FOXD4L5Q5VV16 416 aaPredicted RBP7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 KRT26Q7Z3Y9 468 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 USP48Q86UV5 1035 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 KDF1Q8NAX2 398 aaPredicted RBP7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 PNMA1Q8ND90 353 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 KAZALD1Q96I82 304 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 ANKIB1Q9P2G1 1089 aa7.6□□□□□ -1.19
DEPDC4-209ENST00000550587 PNMA6EA0A0J9YXQ4 647 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 ESPNB1AK53 854 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 PSMD14O00487 310 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 SRGAP3O43295 1099 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 PCCAP05165 728 aaPredicted RBP7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 ZNF157P51786 506 aaPredicted RBP7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 RPS8P62241 208 aaKnown RBP7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 KCNMA1Q12791 1236 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 DGKZQ13574 1117 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 SF3B3Q15393 1217 aaKnown RBP7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 RGMBQ6NW40 437 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 UBE3BQ7Z3V4 1068 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 ZBTB38Q8NAP3 1195 aaPredicted RBP7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 FAM89AQ96GI7 184 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 SUCLG2Q96I99 432 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 TRIM34Q9BYJ4 488 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 DBNDD1Q9H9R9 158 aa7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 GBA2Q9HCG7 927 aaPredicted RBP7.59□□□□□ -1.19
DEPDC4-209ENST00000550587 ANKRD36CQ5JPF3 1778 aa7.59□□□□□ -1.2
DEPDC4-209ENST00000550587 COL4A5P29400 1685 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 IRS4O14654 1257 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 ECE2O60344 883 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 PTGIRP43119 386 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 FOXO4P98177 505 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 RABL6Q3YEC7 729 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 CCDC152Q4G0S7 254 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 TBC1D10BQ4KMP7 808 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 HSP90AB4PQ58FF6 505 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 ANKRD45Q5TZF3 282 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 ZNF385CQ66K41 422 aaPredicted RBP7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 SV2AQ7L0J3 742 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 CHD1LQ86WJ1 897 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 WHAMMQ8TF30 809 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 PLA2G12BQ9BX93 195 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 MCOLN1Q9GZU1 580 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 BICC1Q9H694 974 aaKnown RBP7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 CYLDQ9NQC7 956 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 GGA1Q9UJY5 639 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 NOP58Q9Y2X3 529 aaKnown RBP7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 LTBP1Q14766 1721 aa7.58□□□□□ -1.2
DEPDC4-209ENST00000550587 YDJCA8MPS7 323 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 RAB11FIP3O75154 756 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 NF2P35240 595 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 HIRAP54198 1017 aaPredicted RBP7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 KIF4BQ2VIQ3 1234 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 EPHA10Q5JZY3 1008 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 OGFOD1Q8N543 542 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 TRPM4Q8TD43 1214 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 JARID2Q92833 1246 aaPredicted RBP7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 SAGE1Q9NXZ1 904 aa7.57□□□□□ -1.2
DEPDC4-209ENST00000550587 PDE8AO60658 829 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 SURF6O75683 361 aaKnown RBP7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 UFL1O94874 794 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 CSF1RP07333 972 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 VIL1P09327 827 aaKnown RBP7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 FKBP1BP68106 108 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 GPSM2P81274 684 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 LMBR1LQ6UX01 489 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 ANKRD18AQ8IVF6 992 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 KCTD17Q8N5Z5 321 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 AGBL3Q8NEM8 1001 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 TBC1D16Q8TBP0 767 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 CELF1Q92879 486 aaKnown RBP7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 CDC5LQ99459 802 aaKnown RBP7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 LRRCC1Q9C099 1032 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 COPRSQ9NQ92 184 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 PODXL2Q9NZ53 605 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 POLLQ9UGP5 575 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 THSD7BQ9C0I4 1608 aa7.56□□□□□ -1.2
DEPDC4-209ENST00000550587 TRPA1O75762 1119 aa7.55□□□□□ -1.2
DEPDC4-209ENST00000550587 ATP2B4P23634 1241 aa7.55□□□□□ -1.2
DEPDC4-209ENST00000550587 RFX5P48382 616 aaPredicted RBP7.55□□□□□ -1.2
DEPDC4-209ENST00000550587 RGS3P49796 1198 aa7.55□□□□□ -1.2
DEPDC4-209ENST00000550587 MMP14P50281 582 aa7.55□□□□□ -1.2
DEPDC4-209ENST00000550587 KIF23Q02241 960 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 80.4 ms