RNA–Protein interactions for RNA: ENST00000550446.5

LETMD1-224, Transcript of LETM1 domain containing 1, humanhuman

TSL 3

Gene LETMD1, Length 562 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-224ENST00000550446 PANK1Q8TE04 598 aa23.13■■□□□ 1.29
LETMD1-224ENST00000550446 P2RX7Q99572 595 aaKnown RBP23.13■■□□□ 1.29
LETMD1-224ENST00000550446 CEP290O15078 2479 aa23.13■■□□□ 1.29
LETMD1-224ENST00000550446 USP5P45974 858 aa23.12■■□□□ 1.29
LETMD1-224ENST00000550446 FXR1P51114 621 aaKnown RBP eCLIP23.12■■□□□ 1.29
LETMD1-224ENST00000550446 ANTXR1Q9H6X2 564 aa23.12■■□□□ 1.29
LETMD1-224ENST00000550446 C19orf81C9J6K1 198 aa23.11■■□□□ 1.29
LETMD1-224ENST00000550446 USP17L10C9JJH3 530 aa23.11■■□□□ 1.29
LETMD1-224ENST00000550446 PEX10O60683 326 aa23.11■■□□□ 1.29
LETMD1-224ENST00000550446 DIEXFQ68CQ4 756 aaKnown RBP23.11■■□□□ 1.29
LETMD1-224ENST00000550446 CHRDL2Q6WN34 429 aa23.11■■□□□ 1.29
LETMD1-224ENST00000550446 AACSQ86V21 672 aa23.11■■□□□ 1.29
LETMD1-224ENST00000550446 GJD2Q9UKL4 321 aa23.11■■□□□ 1.29
LETMD1-224ENST00000550446 ZBTB21Q9ULJ3 1066 aa23.11■■□□□ 1.29
LETMD1-224ENST00000550446 PTPRFP10586 1907 aa23.1■■□□□ 1.29
LETMD1-224ENST00000550446 HOXA7P31268 230 aaPredicted RBP23.1■■□□□ 1.29
LETMD1-224ENST00000550446 MAP3K12Q12852 859 aa23.1■■□□□ 1.29
LETMD1-224ENST00000550446 ERC1Q8IUD2 1116 aa23.1■■□□□ 1.29
LETMD1-224ENST00000550446 GINM1Q9NU53 330 aa23.1■■□□□ 1.29
LETMD1-224ENST00000550446 MGAMO43451 1857 aa23.09■■□□□ 1.29
LETMD1-224ENST00000550446 GPRC5AQ8NFJ5 357 aa23.09■■□□□ 1.29
LETMD1-224ENST00000550446 IL1RAPL2Q9NP60 686 aa23.09■■□□□ 1.29
LETMD1-224ENST00000550446 PAK6Q9NQU5 681 aaPredicted RBP23.09■■□□□ 1.29
LETMD1-224ENST00000550446 MORF4L1Q9UBU8 362 aa23.09■■□□□ 1.29
LETMD1-224ENST00000550446 NR2E3Q9Y5X4 410 aa23.09■■□□□ 1.29
LETMD1-224ENST00000550446 GH2P01242 217 aa23.08■■□□□ 1.29
LETMD1-224ENST00000550446 HERVK_113P62684 666 aa23.08■■□□□ 1.29
LETMD1-224ENST00000550446 BCL11AQ9H165 835 aa23.08■■□□□ 1.29
LETMD1-224ENST00000550446 APBB1O00213 710 aa23.07■■□□□ 1.28
LETMD1-224ENST00000550446 CERS3Q8IU89 383 aa23.07■■□□□ 1.28
LETMD1-224ENST00000550446 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.07■■□□□ 1.28
LETMD1-224ENST00000550446 TXNRD2Q9NNW7 524 aa23.07■■□□□ 1.28
LETMD1-224ENST00000550446 EMILIN3Q9NT22 766 aa23.07■■□□□ 1.28
LETMD1-224ENST00000550446 HMGCRP04035 888 aa23.06■■□□□ 1.28
LETMD1-224ENST00000550446 CYP2B6P20813 491 aa23.06■■□□□ 1.28
LETMD1-224ENST00000550446 TRIM32Q13049 653 aa23.06■■□□□ 1.28
LETMD1-224ENST00000550446 HSP90AB4PQ58FF6 505 aa23.06■■□□□ 1.28
LETMD1-224ENST00000550446 USP17L2Q6R6M4 530 aa23.06■■□□□ 1.28
LETMD1-224ENST00000550446 PAWRQ96IZ0 340 aaKnown RBP23.06■■□□□ 1.28
LETMD1-224ENST00000550446 CRISPLD2Q9H0B8 497 aa23.06■■□□□ 1.28
LETMD1-224ENST00000550446 RBM27Q9P2N5 1060 aaKnown RBP23.06■■□□□ 1.28
LETMD1-224ENST00000550446 RBPJLQ9UBG7 517 aa23.06■■□□□ 1.28
LETMD1-224ENST00000550446 EVI5O60447 810 aa23.05■■□□□ 1.28
LETMD1-224ENST00000550446 CAPN2P17655 700 aa23.05■■□□□ 1.28
LETMD1-224ENST00000550446 ZYXQ15942 572 aaKnown RBP23.05■■□□□ 1.28
LETMD1-224ENST00000550446 Q3C1V9 767 aa23.05■■□□□ 1.28
LETMD1-224ENST00000550446 TATDN1Q6P1N9 297 aa23.05■■□□□ 1.28
LETMD1-224ENST00000550446 TTC6Q86TZ1 520 aa23.05■■□□□ 1.28
LETMD1-224ENST00000550446 CCAR1Q8IX12 1150 aaKnown RBP23.05■■□□□ 1.28
LETMD1-224ENST00000550446 RHPN1Q8TCX5 695 aa23.05■■□□□ 1.28
LETMD1-224ENST00000550446 HMX1Q9NP08 348 aaPredicted RBP23.05■■□□□ 1.28
LETMD1-224ENST00000550446 SERPINB13Q9UIV8 391 aa23.05■■□□□ 1.28
LETMD1-224ENST00000550446 DOCK3Q8IZD9 2030 aa23.04■■□□□ 1.28
LETMD1-224ENST00000550446 RAB3GAP1Q15042 981 aa23.04■■□□□ 1.28
LETMD1-224ENST00000550446 CERKLQ49MI3 558 aaPredicted RBP23.04■■□□□ 1.28
LETMD1-224ENST00000550446 FEZ1Q99689 392 aa23.04■■□□□ 1.28
LETMD1-224ENST00000550446 PAGR1Q9BTK6 254 aa23.04■■□□□ 1.28
LETMD1-224ENST00000550446 ZBED9Q6R2W3 1325 aa23.04■■□□□ 1.28
LETMD1-224ENST00000550446 RPTORQ8N122 1335 aa23.04■■□□□ 1.28
LETMD1-224ENST00000550446 NUDT12Q9BQG2 462 aa23.03■■□□□ 1.28
LETMD1-224ENST00000550446 RANBP2P49792 3224 aaKnown RBP23.03■■□□□ 1.28
LETMD1-224ENST00000550446 LOC285556D6RIA3 1793 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 MAGEB6P1A0A0J9YX57 407 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 POLR3DP05423 398 aaPredicted RBP23.02■■□□□ 1.28
LETMD1-224ENST00000550446 MS4A1P11836 297 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 PLCD1P51178 756 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 ERVK-9P63128 1117 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 ERVK-24P63145 666 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 TTF1Q15361 905 aaPredicted RBP23.02■■□□□ 1.28
LETMD1-224ENST00000550446 ABCB5Q2M3G0 1257 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 SLC9C2Q5TAH2 1124 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 TMED8Q6PL24 325 aaPredicted RBP23.02■■□□□ 1.28
LETMD1-224ENST00000550446 NECAB2Q7Z6G3 386 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 CLASRPQ8N2M8 674 aaKnown RBP23.02■■□□□ 1.28
LETMD1-224ENST00000550446 DIS3LQ8TF46 1054 aaKnown RBP23.02■■□□□ 1.28
LETMD1-224ENST00000550446 TRIB2Q92519 343 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 EHD4Q9H223 541 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 ATAD5Q96QE3 1844 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 TRIOBPQ9H2D6 2365 aa23.02■■□□□ 1.28
LETMD1-224ENST00000550446 SIPA1L1O43166 1804 aa23.01■■□□□ 1.27
LETMD1-224ENST00000550446 MAPK4P31152 587 aa23.01■■□□□ 1.27
LETMD1-224ENST00000550446 PDE3AQ14432 1141 aa23.01■■□□□ 1.27
LETMD1-224ENST00000550446 POTEEQ6S8J3 1075 aa23.01■■□□□ 1.27
LETMD1-224ENST00000550446 RIOK1Q9BRS2 568 aaKnown RBP23.01■■□□□ 1.27
LETMD1-224ENST00000550446 PORCNQ9H237 461 aa23.01■■□□□ 1.27
LETMD1-224ENST00000550446 CABP5Q9NP86 173 aa23.01■■□□□ 1.27
LETMD1-224ENST00000550446 MYO5AQ9Y4I1 1855 aaKnown RBP23■■□□□ 1.27
LETMD1-224ENST00000550446 MAST2Q6P0Q8 1798 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L15C9J2P7 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L13C9JLJ4 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L11C9JVI0 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L18D6R9N7 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L22D6RA61 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L17D6RBQ6 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L19D6RCP7 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L20D6RJB6 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 IFIT2P09913 472 aaKnown RBP23■■□□□ 1.27
LETMD1-224ENST00000550446 USP17L24Q0WX57 530 aa23■■□□□ 1.27
LETMD1-224ENST00000550446 RPAP2Q8IXW5 612 aaPredicted RBP23■■□□□ 1.27
LETMD1-224ENST00000550446 ACER1Q8TDN7 264 aa23■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms