RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 M0R2C6 588 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 GH2P01242 217 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 POLR3DP05423 398 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-229ENST00000549883 HMGCS2P54868 508 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 GABPAQ06546 454 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 TATDN1Q6P1N9 297 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 TMED8Q6PL24 325 aaPredicted RBP11.81□□□□□ -0.52
HDAC7-229ENST00000549883 C17orf99Q6UX52 265 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 ZNF280CQ8ND82 737 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 GPATCH3Q96I76 525 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 SEC62Q99442 399 aaKnown RBP11.81□□□□□ -0.52
HDAC7-229ENST00000549883 TRIM34Q9BYJ4 488 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 LNPKQ9C0E8 428 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 ZCCHC17Q9NP64 241 aaKnown RBP11.81□□□□□ -0.52
HDAC7-229ENST00000549883 TTC41PQ6P2S7 1318 aa11.81□□□□□ -0.52
HDAC7-229ENST00000549883 RNF113AO15541 343 aaKnown RBP11.8□□□□□ -0.52
HDAC7-229ENST00000549883 PEX10O60683 326 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 GUCY1A2P33402 732 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 MTMR2Q13614 643 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 FASTKD5Q7L8L6 764 aaKnown RBP11.8□□□□□ -0.52
HDAC7-229ENST00000549883 TTC6Q86TZ1 520 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 CERS3Q8IU89 383 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 SMC5Q8IY18 1101 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 GCC1Q96CN9 775 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 ERO1AQ96HE7 468 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 STRBPQ96SI9 672 aaKnown RBP11.8□□□□□ -0.52
HDAC7-229ENST00000549883 EHD4Q9H223 541 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 SLC4A4Q9Y6R1 1079 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 HTTP42858 3142 aa11.8□□□□□ -0.52
HDAC7-229ENST00000549883 USP17L12C9JPN9 530 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 USP17L21D6R901 530 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 GLRX3O76003 335 aaKnown RBP11.79□□□□□ -0.52
HDAC7-229ENST00000549883 ASNSP08243 561 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 BCRP11274 1271 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 PDE1AP54750 535 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 SOX10P56693 466 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 LACTBP83111 547 aaPredicted RBP11.79□□□□□ -0.52
HDAC7-229ENST00000549883 FBXO46Q6PJ61 603 aaPredicted RBP11.79□□□□□ -0.52
HDAC7-229ENST00000549883 CLEC10AQ8IUN9 316 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 ACER1Q8TDN7 264 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 APPBP2Q92624 585 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 WDR18Q9BV38 432 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 EFCC1Q9HA90 598 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 AGTPBP1Q9UPW5 1226 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 PTPN22Q9Y2R2 807 aa11.79□□□□□ -0.52
HDAC7-229ENST00000549883 GSG1L2A8MUP6 293 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 BACE1P56817 501 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 SEPT2Q15019 361 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 RAB3GAP1Q15042 981 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 ZYXQ15942 572 aaKnown RBP11.78□□□□□ -0.52
HDAC7-229ENST00000549883 ABCB5Q2M3G0 1257 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 CERKLQ49MI3 558 aaPredicted RBP11.78□□□□□ -0.52
HDAC7-229ENST00000549883 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 C12orf60Q5U649 245 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 ZSCAN25Q6NSZ9 544 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 CTR9Q6PD62 1173 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 STK11IPQ8N1F8 1099 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 TRIM47Q96LD4 638 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 PARK7Q99497 189 aaKnown RBP11.78□□□□□ -0.52
HDAC7-229ENST00000549883 RWDD1Q9H446 243 aaPredicted RBP11.78□□□□□ -0.52
HDAC7-229ENST00000549883 EPB41L4AQ9HCS5 686 aaPredicted RBP11.78□□□□□ -0.52
HDAC7-229ENST00000549883 EMILIN3Q9NT22 766 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 PTCH2Q9Y6C5 1203 aa11.78□□□□□ -0.52
HDAC7-229ENST00000549883 ERC2O15083 957 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 GPAA1O43292 621 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 AKR1B1P15121 316 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 PKN2Q16513 984 aaKnown RBP11.77□□□□□ -0.53
HDAC7-229ENST00000549883 POTEEQ6S8J3 1075 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 CCDC129Q6ZRS4 1044 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 FSD1Q9BTV5 496 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 ASCC2Q9H1I8 757 aaPredicted RBP11.77□□□□□ -0.53
HDAC7-229ENST00000549883 AS3MTQ9HBK9 375 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 ATP8A2Q9NTI2 1148 aa11.77□□□□□ -0.53
HDAC7-229ENST00000549883 CENPFP49454 3210 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 A0A1W2PRG0 241 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 USP17L10C9JJH3 530 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 FOXP2O15409 715 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 PSMC4P43686 418 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 CDK8P49336 464 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 NUCB1Q02818 461 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 AAMPQ13685 434 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 KIAA1755Q5JYT7 1200 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 ZMYM1Q5SVZ6 1142 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 CHD1LQ86WJ1 897 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 SIAH1Q8IUQ4 282 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 PLEKHM2Q8IWE5 1019 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 PROCA1Q8NCQ7 364 aaPredicted RBP11.76□□□□□ -0.53
HDAC7-229ENST00000549883 SLC45A1Q9Y2W3 748 aa11.76□□□□□ -0.53
HDAC7-229ENST00000549883 GREB1LQ9C091 1923 aaPredicted RBP11.76□□□□□ -0.53
HDAC7-229ENST00000549883 KIAA0100Q14667 2235 aaKnown RBP11.75□□□□□ -0.53
HDAC7-229ENST00000549883 MPHOSPH10O00566 681 aaKnown RBP11.75□□□□□ -0.53
HDAC7-229ENST00000549883 OSBPP22059 807 aa11.75□□□□□ -0.53
HDAC7-229ENST00000549883 C16orf86Q6ZW13 317 aa11.75□□□□□ -0.53
HDAC7-229ENST00000549883 ANKRD13CQ8N6S4 541 aa11.75□□□□□ -0.53
HDAC7-229ENST00000549883 SMCR8Q8TEV9 937 aaPredicted RBP11.75□□□□□ -0.53
HDAC7-229ENST00000549883 P2RX7Q99572 595 aaKnown RBP11.75□□□□□ -0.53
HDAC7-229ENST00000549883 TBC1D2Q9BYX2 928 aa11.75□□□□□ -0.53
HDAC7-229ENST00000549883 GINM1Q9NU53 330 aa11.75□□□□□ -0.53
HDAC7-229ENST00000549883 ZBTB47Q9UFB7 747 aaPredicted RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms