RNA–Protein interactions for RNA: ENST00000549274.1

SMARCD1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 611 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-206ENST00000549274 TMEM179Q6ZVK1 233 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 SH3BP5LQ7L8J4 393 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 IL17RAQ96F46 866 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 SYNPO2Q9UMS6 1093 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 CSADQ9Y600 493 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 DOCK1Q14185 1865 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 PLIN4Q96Q06 1357 aa11.53□□□□□ -0.56
SMARCD1-206ENST00000549274 ATAD5Q96QE3 1844 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 RANBP6O60518 1105 aaKnown RBP11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 TSPY3P0CV98 308 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 TSPY8P0CW00 308 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 TTLL12Q14166 644 aaPredicted RBP11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 ANKRD1Q15327 319 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 MAP3K11Q16584 847 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 NOL9Q5SY16 702 aaKnown RBP11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 BLOC1S2Q6QNY1 142 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 PAXIP1Q6ZW49 1069 aaPredicted RBP11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 ZFPM1Q8IX07 1006 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 HOMEZQ8IX15 550 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 ANKRD13AQ8IZ07 590 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 TMTC2Q8N394 836 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 TMEM87BQ96K49 555 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 NEK1Q96PY6 1258 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 UBAC1Q9BSL1 405 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 SH2D4AQ9H788 454 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 PICK1Q9NRD5 415 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 ZNF112Q9UJU3 913 aa11.52□□□□□ -0.57
SMARCD1-206ENST00000549274 CYP2D6P10635 497 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 CAP2P40123 477 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 MAP3K9P80192 1104 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 CTDSPL2Q05D32 466 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 ABCB5Q2M3G0 1257 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 RRP12Q5JTH9 1297 aaKnown RBP11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 CHMP4CQ96CF2 233 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 KLRG1Q96E93 195 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 TTC14Q96N46 770 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 WRNIP1Q96S55 665 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 AS3MTQ9HBK9 375 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 TCP11L1Q9NUJ3 509 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 SNX14Q9Y5W7 946 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 CYP46A1Q9Y6A2 500 aa11.51□□□□□ -0.57
SMARCD1-206ENST00000549274 CYP2D7A0A087X1C5 515 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 ST18O60284 1047 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 CELF2O95319 508 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 SEC24BO95487 1268 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 ITGBL1O95965 494 aaPredicted RBP11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 POTEIP0CG38 1075 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 POTEJP0CG39 1038 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 RASA1P20936 1047 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 SHMT1P34896 483 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 FGD1P98174 961 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 RABEP1Q15276 862 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 SLC4A8Q2Y0W8 1093 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 DHX32Q7L7V1 743 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 TBC1D10CQ8IV04 446 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 SCYL3Q8IZE3 742 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 NEDD1Q8NHV4 660 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 JAKMIP1Q96N16 626 aaKnown RBP11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 KANSL2Q9H9L4 492 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 ARHGEF10LQ9HCE6 1279 aa11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 GBA2Q9HCG7 927 aaPredicted RBP11.5□□□□□ -0.57
SMARCD1-206ENST00000549274 GREB1LQ9C091 1923 aaPredicted RBP11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 B4E1Z4 1266 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 MPHOSPH10O00566 681 aaKnown RBP11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 CASTP20810 708 aaKnown RBP11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 MCM2P49736 904 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 TFAP4Q01664 338 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 RUFY3Q7L099 469 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 MIGA2Q7L4E1 593 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.49□□□□□ -0.572e-8■■■■■ 51
SMARCD1-206ENST00000549274 DYNLL2Q96FJ2 89 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 ZNF408Q9H9D4 720 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 ZSWIM6Q9HCJ5 1215 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 ANGEL1Q9UNK9 670 aaKnown RBP11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 PASKQ96RG2 1323 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 SSC5DA1L4H1 1573 aa11.49□□□□□ -0.57
SMARCD1-206ENST00000549274 MYH4Q9Y623 1939 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 USP17L5A8MUK1 530 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 PHF20L1A8MW92 1017 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 KDM4AO75164 1064 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 USP2O75604 605 aaPredicted RBP11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 TTLL1O95922 423 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 RPS6KB1P23443 525 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 SYNE3Q6ZMZ3 975 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 DGKHQ86XP1 1220 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 MB21D2Q8IYB1 491 aaPredicted RBP11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 FBXL16Q8N461 479 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 HHIPL1Q96JK4 782 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 NBPF3Q9H094 633 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 DNAJC18Q9H819 358 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 ZSWIM5Q9P217 1185 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 ZBTB21Q9ULJ3 1066 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 NEDD4P46934 1319 aa11.48□□□□□ -0.57
SMARCD1-206ENST00000549274 OTOFQ9HC10 1997 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 TMEM88BA6NKF7 163 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 IFIT3O14879 490 aaKnown RBP11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 PRC1O43663 620 aa11.47□□□□□ -0.57
SMARCD1-206ENST00000549274 GH2P01242 217 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms