RNA–Protein interactions for RNA: ENST00000548946.1

UBE2N-202, Transcript of ubiquitin conjugating enzyme E2 N, humanhuman

TSL 3

Gene UBE2N, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2N-202ENST00000548946 SPACA3Q8IXA5 215 aa7.9□□□□□ -1.14
UBE2N-202ENST00000548946 RC3H2Q9HBD1 1191 aaKnown RBP7.9□□□□□ -1.14
UBE2N-202ENST00000548946 GFRA2O00451 464 aa7.89□□□□□ -1.15
UBE2N-202ENST00000548946 PDE4BQ07343 736 aa7.89□□□□□ -1.15
UBE2N-202ENST00000548946 NKG7Q16617 165 aa7.89□□□□□ -1.15
UBE2N-202ENST00000548946 NKPD1Q17RQ9 610 aa7.89□□□□□ -1.15
UBE2N-202ENST00000548946 CCDC27Q2M243 656 aa7.89□□□□□ -1.15
UBE2N-202ENST00000548946 SFRP5Q5T4F7 317 aa7.89□□□□□ -1.15
UBE2N-202ENST00000548946 ATG4DQ86TL0 474 aaPredicted RBP7.89□□□□□ -1.15
UBE2N-202ENST00000548946 MRS2Q9HD23 443 aa7.89□□□□□ -1.15
UBE2N-202ENST00000548946 USP31Q70CQ4 1352 aa7.88□□□□□ -1.15
UBE2N-202ENST00000548946 FAM155AB1AL88 458 aaPredicted RBP7.88□□□□□ -1.15
UBE2N-202ENST00000548946 SORBS3O60504 671 aa7.88□□□□□ -1.15
UBE2N-202ENST00000548946 CST3P01034 146 aaPredicted RBP7.88□□□□□ -1.15
UBE2N-202ENST00000548946 RNASE1P07998 156 aaKnown RBP7.88□□□□□ -1.15
UBE2N-202ENST00000548946 TFE3P19532 575 aaPredicted RBP7.88□□□□□ -1.15
UBE2N-202ENST00000548946 IKZF1Q13422 519 aa7.88□□□□□ -1.15
UBE2N-202ENST00000548946 LETMD1Q6P1Q0 360 aa7.88□□□□□ -1.15
UBE2N-202ENST00000548946 SLC23A3Q6PIS1 610 aa7.88□□□□□ -1.15
UBE2N-202ENST00000548946 FBXO33Q7Z6M2 555 aa7.88□□□□□ -1.15
UBE2N-202ENST00000548946 MBNL3Q9NUK0 354 aaKnown RBP7.88□□□□□ -1.15
UBE2N-202ENST00000548946 PAPLNO95428 1278 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 PGRP06401 933 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 CYP7A1P22680 504 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 RPL6Q02878 288 aaKnown RBP7.87□□□□□ -1.15
UBE2N-202ENST00000548946 PRAMEF13Q5VWM6 474 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 C22orf34Q6ZV56 151 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 JARID2Q92833 1246 aaPredicted RBP7.87□□□□□ -1.15
UBE2N-202ENST00000548946 CRELD1Q96HD1 420 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 FAM161BQ96MY7 647 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 ADAMTS6Q9UKP5 1117 aa7.87□□□□□ -1.15
UBE2N-202ENST00000548946 SCRIBQ14160 1630 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 CTSHP09668 335 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 ZNF865P0CJ78 1059 aaPredicted RBP7.86□□□□□ -1.15
UBE2N-202ENST00000548946 ZP2Q05996 745 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 SLC6A19Q695T7 634 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 CCDC84Q86UT8 332 aaPredicted RBP7.86□□□□□ -1.15
UBE2N-202ENST00000548946 MFSD4AQ8N468 514 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 XAGE3Q8WTP9 111 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 COX4I2Q96KJ9 171 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 GZF1Q9H116 711 aaPredicted RBP7.86□□□□□ -1.15
UBE2N-202ENST00000548946 TLR6Q9Y2C9 796 aa7.86□□□□□ -1.15
UBE2N-202ENST00000548946 PITPNM2Q9BZ72 1349 aa7.85□□□□□ -1.15
UBE2N-202ENST00000548946 CENPBP07199 599 aaPredicted RBP7.85□□□□□ -1.15
UBE2N-202ENST00000548946 YBX3P16989 372 aaKnown RBP eCLIP7.85□□□□□ -1.15
UBE2N-202ENST00000548946 RELL1Q8IUW5 271 aa7.85□□□□□ -1.15
UBE2N-202ENST00000548946 MRPL41Q8IXM3 137 aaKnown RBP7.85□□□□□ -1.15
UBE2N-202ENST00000548946 LRRN4CLQ8ND94 238 aa7.85□□□□□ -1.15
UBE2N-202ENST00000548946 PHC3Q8NDX5 983 aa7.85□□□□□ -1.15
UBE2N-202ENST00000548946 RIN3Q8TB24 985 aa7.85□□□□□ -1.15
UBE2N-202ENST00000548946 VTI1BQ9UEU0 232 aa7.85□□□□□ -1.15
UBE2N-202ENST00000548946 BPNT1O95861 308 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 CDKAL1Q5VV42 579 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 OGFOD2Q6N063 350 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 HSPA12BQ96MM6 686 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 KRTAP9-9Q9BYP9 154 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 KRTAP9-4Q9BYQ2 154 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 LMCD1Q9NZU5 365 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 TJP2Q9UDY2 1190 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 ADAM30Q9UKF2 790 aa7.84□□□□□ -1.15
UBE2N-202ENST00000548946 PRR33A8MZF0 331 aa7.83□□□□□ -1.16
UBE2N-202ENST00000548946 KIR3DL1P43629 444 aa7.83□□□□□ -1.16
UBE2N-202ENST00000548946 LMNB2Q03252 620 aa7.83□□□□□ -1.16
UBE2N-202ENST00000548946 PWP1Q13610 501 aa7.83□□□□□ -1.16
UBE2N-202ENST00000548946 MCATQ8IVS2 390 aaKnown RBP7.83□□□□□ -1.16
UBE2N-202ENST00000548946 TMEM87BQ96K49 555 aa7.83□□□□□ -1.16
UBE2N-202ENST00000548946 WRNQ14191 1432 aaPredicted RBP eCLIP7.83□□□□□ -1.16
UBE2N-202ENST00000548946 CNTNAP4Q9C0A0 1308 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 CBX7O95931 251 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 ETV3P41162 512 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 CAMK2GQ13555 558 aaPredicted RBP7.82□□□□□ -1.16
UBE2N-202ENST00000548946 CDH24Q86UP0 819 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 FAM168AQ92567 244 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 RSRP1Q9BUV0 290 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 PRDM7Q9NQW5 492 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 SEMA3GQ9NS98 782 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 CAPN6Q9Y6Q1 641 aa7.82□□□□□ -1.16
UBE2N-202ENST00000548946 H3BS24 57 aa7.81□□□□□ -1.16
UBE2N-202ENST00000548946 TAGLNQ01995 201 aaKnown RBP7.81□□□□□ -1.16
UBE2N-202ENST00000548946 BNC2Q6ZN30 1099 aaPredicted RBP7.81□□□□□ -1.16
UBE2N-202ENST00000548946 THAP5Q7Z6K1 395 aa7.81□□□□□ -1.16
UBE2N-202ENST00000548946 POU5F2Q8N7G0 328 aa7.81□□□□□ -1.16
UBE2N-202ENST00000548946 DPH2Q9BQC3 489 aaPredicted RBP7.81□□□□□ -1.16
UBE2N-202ENST00000548946 CECR2Q9BXF3 1484 aa7.81□□□□□ -1.16
UBE2N-202ENST00000548946 EIF4G1Q04637 1599 aaKnown RBP7.8□□□□□ -1.16
UBE2N-202ENST00000548946 MROH2BQ7Z745 1585 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 CARMIL2Q6F5E8 1435 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 CILPO75339 1184 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 PF4P02776 101 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 PLCG1P19174 1290 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 GBP2P32456 591 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-202ENST00000548946 FLAD1Q8NFF5 587 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 GATAD2BQ8WXI9 593 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 ACSF2Q96CM8 615 aaPredicted RBP7.8□□□□□ -1.16
UBE2N-202ENST00000548946 TMEM74Q96NL1 305 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 BCL11AQ9H165 835 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 ATP13A1Q9HD20 1204 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 ST14Q9Y5Y6 855 aa7.8□□□□□ -1.16
UBE2N-202ENST00000548946 F6X3S4 739 aa7.79□□□□□ -1.16
UBE2N-202ENST00000548946 TMEM40Q8WWA1 233 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms