RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 GCLCP48506 637 aaPredicted RBP21.19■□□□□ 0.98
CHMP1A-205ENST00000548650 BACE1P56817 501 aa21.19■□□□□ 0.98
CHMP1A-205ENST00000548650 MAP3K12Q12852 859 aa21.19■□□□□ 0.98
CHMP1A-205ENST00000548650 IRF5Q13568 498 aa21.19■□□□□ 0.98
CHMP1A-205ENST00000548650 GINM1Q9NU53 330 aa21.19■□□□□ 0.98
CHMP1A-205ENST00000548650 ZBTB40Q9NUA8 1239 aa21.19■□□□□ 0.98
CHMP1A-205ENST00000548650 MYH7P12883 1935 aa21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 ADCY3O60266 1144 aa21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 GJB1P08034 283 aa21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 ELNP15502 786 aa21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 GJA8P48165 433 aa21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 UBXN2AP68543 259 aa21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 RPAP2Q8IXW5 612 aaPredicted RBP21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 GCC1Q96CN9 775 aa21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 RIOK1Q9BRS2 568 aaKnown RBP21.18■□□□□ 0.98
CHMP1A-205ENST00000548650 USP5P45974 858 aa21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 NKX2-3Q8TAU0 364 aa21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 PXYLP1Q8TE99 480 aa21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 KIF1BPQ96EK5 621 aa21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 RNF208Q9H0X6 261 aa21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 UNC93B1Q9H1C4 597 aa21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 EHD4Q9H223 541 aa21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 BIN2Q9UBW5 565 aaPredicted RBP21.17■□□□□ 0.98
CHMP1A-205ENST00000548650 APBB1O00213 710 aa21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 HMMRO75330 724 aa21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 INHAP05111 366 aa21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 UBE2Q1Q7Z7E8 422 aa21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 CLASRPQ8N2M8 674 aaKnown RBP21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 COA7Q96BR5 231 aa21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 TMOD4Q9NZQ9 345 aa21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 MORF4L1Q9UBU8 362 aa21.16■□□□□ 0.98
CHMP1A-205ENST00000548650 PDE6AP16499 860 aa21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 HOXA7P31268 230 aaPredicted RBP21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 TTF1Q15361 905 aaPredicted RBP21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 TATDN1Q6P1N9 297 aa21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 PPIL4Q8WUA2 492 aaKnown RBP eCLIP21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 SERPINB13Q9UIV8 391 aa21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 RCAN3Q9UKA8 241 aa21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 MYH8P13535 1937 aa21.15■□□□□ 0.98
CHMP1A-205ENST00000548650 C19orf81C9J6K1 198 aa21.14■□□□□ 0.97
CHMP1A-205ENST00000548650 USP17L10C9JJH3 530 aa21.14■□□□□ 0.97
CHMP1A-205ENST00000548650 GH2P01242 217 aa21.14■□□□□ 0.97
CHMP1A-205ENST00000548650 IRX3P78415 501 aaPredicted RBP21.14■□□□□ 0.97
CHMP1A-205ENST00000548650 U2AF1L4Q8WU68 220 aaKnown RBP21.14■□□□□ 0.97
CHMP1A-205ENST00000548650 HERVK_113P62684 666 aa21.13■□□□□ 0.97
CHMP1A-205ENST00000548650 BAZ2AQ9UIF9 1905 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 MAGEB6P1A0A0J9YX57 407 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 TCRBV5S4A2TA0A5A2 114 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 GOLIM4O00461 696 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 IFIT2P09913 472 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 HABP4Q5JVS0 413 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 SLC9C2Q5TAH2 1124 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 DNAJC2Q99543 621 aaKnown RBP21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 TXNRD2Q9NNW7 524 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 EMILIN3Q9NT22 766 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 TAOK2Q9UL54 1235 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 ALPK3Q96L96 1907 aa21.12■□□□□ 0.97
CHMP1A-205ENST00000548650 ZNF532Q9HCE3 1301 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 PEX10O60683 326 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 RAB11FIP3O75154 756 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 SHMT1P34896 483 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 C20orf194Q5TEA3 1177 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 TTC6Q86TZ1 520 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 EDC3Q96F86 508 aaKnown RBP21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 C12orf42Q96LP6 360 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 P2RX7Q99572 595 aaKnown RBP21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 PAK6Q9NQU5 681 aaPredicted RBP21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 GJD2Q9UKL4 321 aa21.11■□□□□ 0.97
CHMP1A-205ENST00000548650 FARP2O94887 1054 aaPredicted RBP21.1■□□□□ 0.97
CHMP1A-205ENST00000548650 SGPL1O95470 568 aa21.1■□□□□ 0.97
CHMP1A-205ENST00000548650 PLCD1P51178 756 aa21.1■□□□□ 0.97
CHMP1A-205ENST00000548650 USP17L2Q6R6M4 530 aa21.1■□□□□ 0.97
CHMP1A-205ENST00000548650 TRIOBPQ9H2D6 2365 aa21.1■□□□□ 0.97
CHMP1A-205ENST00000548650 H0YGN5 161 aa21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 EVX2Q03828 476 aa21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 GABPAQ06546 454 aa21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 POTEEQ6S8J3 1075 aa21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 LCORLQ8N3X6 602 aa21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 FEZ1Q99689 392 aa21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 CRNKL1Q9BZJ0 848 aaKnown RBP21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 CHMP4BQ9H444 224 aaKnown RBP21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 A0A0G2JMZ2 1700 aa21.09■□□□□ 0.97
CHMP1A-205ENST00000548650 HMGCRP04035 888 aa21.08■□□□□ 0.97
CHMP1A-205ENST00000548650 ABCB5Q2M3G0 1257 aa21.08■□□□□ 0.97
CHMP1A-205ENST00000548650 CERKLQ49MI3 558 aaPredicted RBP21.08■□□□□ 0.97
CHMP1A-205ENST00000548650 DEFB118Q96PH6 123 aa21.08■□□□□ 0.97
CHMP1A-205ENST00000548650 RBPJLQ9UBG7 517 aa21.08■□□□□ 0.97
CHMP1A-205ENST00000548650 PDE3AQ14432 1141 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 RAB3GAP1Q15042 981 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 ZYXQ15942 572 aaKnown RBP21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 GPRC5AQ8NFJ5 357 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 GTF3C2Q8WUA4 911 aaPredicted RBP21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 SDR42E1Q8WUS8 393 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 KIAA1683Q9H0B3 1180 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 CRISPLD2Q9H0B8 497 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 BCL11AQ9H165 835 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 PAG1Q9NWQ8 432 aa21.07■□□□□ 0.96
CHMP1A-205ENST00000548650 RLFQ13129 1914 aa21.06■□□□□ 0.96
CHMP1A-205ENST00000548650 ATP5JP18859 108 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms