RNA–Protein interactions for RNA: ENST00000548421.2

BRF1-213, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-213ENST00000548421 BECN1Q14457 450 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 SART3Q15020 963 aaKnown RBP33.88■■■■□ 3.01
BRF1-213ENST00000548421 IQCA1Q86XH1 822 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 SULF1Q8IWU6 871 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 AGXT2Q9BYV1 514 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 RRAGCQ9HB90 399 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 FAM196BA6NMK8 535 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 TSPY3P0CV98 308 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 TSPY8P0CW00 308 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 SLURP2P0DP57 97 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 TOB2Q14106 344 aaPredicted RBP33.88■■■■□ 3.01
BRF1-213ENST00000548421 TATDN1Q6P1N9 297 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 UBAC1Q9BSL1 405 aa33.88■■■■□ 3.01
BRF1-213ENST00000548421 XPO5Q9HAV4 1204 aaKnown RBP eCLIP33.88■■■■□ 3.013e-6■□□□□ 9.8
BRF1-213ENST00000548421 TBC1D2Q9BYX2 928 aa33.87■■■■□ 3.01
BRF1-213ENST00000548421 IFIT3O14879 490 aaKnown RBP33.86■■■■□ 3.01
BRF1-213ENST00000548421 HOOK2Q96ED9 719 aa33.86■■■■□ 3.01
BRF1-213ENST00000548421 ZKSCAN3Q9BRR0 538 aa33.86■■■■□ 3.01
BRF1-213ENST00000548421 ERICH2A1L162 156 aa33.85■■■■□ 3.01
BRF1-213ENST00000548421 SH2B2O14492 632 aaPredicted RBP33.85■■■■□ 3.01
BRF1-213ENST00000548421 MAP3K10Q02779 954 aa33.85■■■■□ 3.01
BRF1-213ENST00000548421 IGDCC4Q8TDY8 1250 aa33.85■■■■□ 3.01
BRF1-213ENST00000548421 CCDC17Q96LX7 622 aa33.85■■■■□ 3.01
BRF1-213ENST00000548421 ZSCAN10Q96SZ4 725 aaPredicted RBP33.85■■■■□ 3.01
BRF1-213ENST00000548421 ANGEL1Q9UNK9 670 aaKnown RBP33.85■■■■□ 3.01
BRF1-213ENST00000548421 PLIN4Q96Q06 1357 aa33.85■■■■□ 3.01
BRF1-213ENST00000548421 GREB1LQ9C091 1923 aaPredicted RBP33.85■■■■□ 3.01
BRF1-213ENST00000548421 TMEM67Q5HYA8 995 aa33.84■■■■□ 3.01
BRF1-213ENST00000548421 NBPF12Q5TAG4 269 aaPredicted RBP33.84■■■■□ 3.01
BRF1-213ENST00000548421 NOL8Q76FK4 1167 aaKnown RBP33.84■■■■□ 3.01
BRF1-213ENST00000548421 BRF1Q92994 677 aa33.84■■■■□ 3.01
BRF1-213ENST00000548421 TNKSO95271 1327 aa33.84■■■■□ 3.01
BRF1-213ENST00000548421 CERKLQ49MI3 558 aaPredicted RBP33.83■■■■□ 3.01
BRF1-213ENST00000548421 MIGA2Q7L4E1 593 aa33.83■■■■□ 3.01
BRF1-213ENST00000548421 KRT26Q7Z3Y9 468 aa33.83■■■■□ 3.01
BRF1-213ENST00000548421 NEDD1Q8NHV4 660 aa33.83■■■■□ 3.01
BRF1-213ENST00000548421 TCP11L1Q9NUJ3 509 aa33.83■■■■□ 3.01
BRF1-213ENST00000548421 K7ELQ4 463 aaPredicted RBP33.82■■■■□ 3.01
BRF1-213ENST00000548421 GPHNQ9NQX3 736 aaPredicted RBP33.82■■■■□ 3.01
BRF1-213ENST00000548421 LIMCH1Q9UPQ0 1083 aa33.82■■■■□ 3.01
BRF1-213ENST00000548421 ADM5C9JUS6 153 aa33.82■■■■□ 3
BRF1-213ENST00000548421 AKR1B1P15121 316 aa33.82■■■■□ 3
BRF1-213ENST00000548421 LIFRP42702 1097 aa33.82■■■■□ 3
BRF1-213ENST00000548421 CCDC178Q5BJE1 867 aa33.82■■■■□ 3
BRF1-213ENST00000548421 LY9Q9HBG7 655 aa33.82■■■■□ 3
BRF1-213ENST00000548421 WTAPQ15007 396 aa33.81■■■■□ 3
BRF1-213ENST00000548421 DCAF15Q66K64 600 aa33.81■■■■□ 3
BRF1-213ENST00000548421 ZNF526Q8TF50 670 aaPredicted RBP33.81■■■■□ 3
BRF1-213ENST00000548421 LARP6Q9BRS8 491 aaKnown RBP33.81■■■■□ 3
BRF1-213ENST00000548421 NMRK2Q9NPI5 230 aa33.81■■■■□ 3
BRF1-213ENST00000548421 CLEC11AQ9Y240 323 aa33.81■■■■□ 3
BRF1-213ENST00000548421 NMT2O60551 498 aa33.8■■■■□ 3
BRF1-213ENST00000548421 SEC23AQ15436 765 aa33.8■■■■□ 3
BRF1-213ENST00000548421 SUPT20HL1Q3ZLR7 823 aa33.8■■■■□ 3
BRF1-213ENST00000548421 PRAMEF18Q5VWM3 479 aa33.8■■■■□ 3
BRF1-213ENST00000548421 ENAHQ8N8S7 591 aaPredicted RBP33.8■■■■□ 3
BRF1-213ENST00000548421 IL17RBQ9NRM6 502 aa33.8■■■■□ 3
BRF1-213ENST00000548421 TMTC2Q8N394 836 aa33.79■■■■□ 3
BRF1-213ENST00000548421 TPCN1Q9ULQ1 816 aa33.79■■■■□ 3
BRF1-213ENST00000548421 MPHOSPH10O00566 681 aaKnown RBP33.78■■■■□ 3
BRF1-213ENST00000548421 APOBRQ0VD83 1088 aa33.78■■■■□ 3
BRF1-213ENST00000548421 SGMS1Q86VZ5 419 aa33.78■■■■□ 3
BRF1-213ENST00000548421 GNL3Q9BVP2 549 aaKnown RBP eCLIP33.78■■■■□ 3
BRF1-213ENST00000548421 SSC5DA1L4H1 1573 aa33.78■■■■□ 3
BRF1-213ENST00000548421 ATAD5Q96QE3 1844 aa33.78■■■■□ 3
BRF1-213ENST00000548421 POTEIP0CG38 1075 aa33.77■■■■□ 3
BRF1-213ENST00000548421 POTEJP0CG39 1038 aa33.77■■■■□ 3
BRF1-213ENST00000548421 EVCP57679 992 aa33.77■■■■□ 3
BRF1-213ENST00000548421 ABCB5Q2M3G0 1257 aa33.77■■■■□ 3
BRF1-213ENST00000548421 IFIT1BQ5T764 474 aaKnown RBP33.77■■■■□ 3
BRF1-213ENST00000548421 CDC37L1Q7L3B6 337 aa33.77■■■■□ 3
BRF1-213ENST00000548421 USP48Q86UV5 1035 aa33.77■■■■□ 3
BRF1-213ENST00000548421 ZSCAN31Q96LW9 406 aaPredicted RBP33.77■■■■□ 3
BRF1-213ENST00000548421 YY1P25490 414 aa33.76■■■■□ 3
BRF1-213ENST00000548421 LDHDQ86WU2 507 aa33.76■■■■□ 3
BRF1-213ENST00000548421 DGKHQ86XP1 1220 aa33.76■■■■□ 3
BRF1-213ENST00000548421 TMX3Q96JJ7 454 aa33.76■■■■□ 3
BRF1-213ENST00000548421 IPO9Q96P70 1041 aaKnown RBP33.76■■■■□ 3
BRF1-213ENST00000548421 SENP2Q9HC62 589 aa33.76■■■■□ 3
BRF1-213ENST00000548421 GDF11O95390 407 aa33.76■■■□□ 2.99
BRF1-213ENST00000548421 RRP1BQ14684 758 aaKnown RBP33.76■■■□□ 2.99
BRF1-213ENST00000548421 NFXL1Q6ZNB6 911 aa33.76■■■□□ 2.99
BRF1-213ENST00000548421 TMEM179Q6ZVK1 233 aa33.76■■■□□ 2.99
BRF1-213ENST00000548421 ZNF341Q9BYN7 854 aa33.76■■■□□ 2.99
BRF1-213ENST00000548421 SH2B1Q9NRF2 756 aaPredicted RBP33.76■■■□□ 2.99
BRF1-213ENST00000548421 IGKV6D-41A0A0C4DH26 115 aa33.75■■■□□ 2.99
BRF1-213ENST00000548421 CCDC69A6NI79 296 aa33.75■■■□□ 2.99
BRF1-213ENST00000548421 ANKS1AQ92625 1134 aa33.75■■■□□ 2.99
BRF1-213ENST00000548421 CEP95Q96GE4 821 aa33.75■■■□□ 2.99
BRF1-213ENST00000548421 CABP5Q9NP86 173 aa33.75■■■□□ 2.99
BRF1-213ENST00000548421 KLF18A0A0U1RQI7 1052 aa33.74■■■□□ 2.99
BRF1-213ENST00000548421 PHF20L1A8MW92 1017 aa33.74■■■□□ 2.99
BRF1-213ENST00000548421 ME3Q16798 604 aa33.74■■■□□ 2.99
BRF1-213ENST00000548421 RCSD1Q6JBY9 416 aa33.74■■■□□ 2.99
BRF1-213ENST00000548421 ZNF274Q96GC6 653 aaPredicted RBP33.74■■■□□ 2.99
BRF1-213ENST00000548421 GLIS2Q9BZE0 524 aaPredicted RBP33.74■■■□□ 2.99
BRF1-213ENST00000548421 BRPF3Q9ULD4 1205 aa33.74■■■□□ 2.99
BRF1-213ENST00000548421 PPP4R3BQ5MIZ7 849 aa33.73■■■□□ 2.99
BRF1-213ENST00000548421 CDCA5Q96FF9 252 aa33.73■■■□□ 2.99
BRF1-213ENST00000548421 MTMR4Q9NYA4 1195 aa33.73■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms