RNA–Protein interactions for RNA: ENST00000547926.6

CEP290-204, Transcript of centrosomal protein 290, humanhuman

TSL 1 (best)

Gene CEP290, Length 2,122 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-204ENST00000547926 ARMCX6Q7L4S7 300 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 TMEM59LQ9UK28 342 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 CAPN6Q9Y6Q1 641 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 PI3P19957 117 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 RING1Q06587 406 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 PHLDB3Q6NSJ2 640 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 MFSD4AQ8N468 514 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 GRIN3AQ8TCU5 1115 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 MAPK8IP1Q9UQF2 711 aa4.57□□□□□ -1.68
CEP290-204ENST00000547926 TMEM238LA0A1B0GVL6 79 aa4.56□□□□□ -1.68
CEP290-204ENST00000547926 SUV39H1O43463 412 aa4.56□□□□□ -1.68
CEP290-204ENST00000547926 SSFA2P28290 1259 aa4.56□□□□□ -1.68
CEP290-204ENST00000547926 RETREG2Q8NC44 543 aa4.56□□□□□ -1.68
CEP290-204ENST00000547926 FBRSQ9HAH7 460 aa4.56□□□□□ -1.68
CEP290-204ENST00000547926 EPB41L4AQ9HCS5 686 aaPredicted RBP4.56□□□□□ -1.68
CEP290-204ENST00000547926 OVOL3O00110 214 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 CBX7O95931 251 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 EFEMP2O95967 443 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 RAC2P15153 192 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 USP5P45974 858 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 NKG7Q16617 165 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 ALKBH2Q6NS38 261 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 SULF2Q8IWU5 870 aa4.55□□□□□ -1.68
CEP290-204ENST00000547926 PTPN12Q05209 780 aaKnown RBP4.54□□□□□ -1.68
CEP290-204ENST00000547926 RASIP1Q5U651 963 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 EBF1Q9UH73 591 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 GPN3Q9UHW5 284 aaPredicted RBP4.54□□□□□ -1.68
CEP290-204ENST00000547926 TPX2Q9ULW0 747 aaKnown RBP4.54□□□□□ -1.68
CEP290-204ENST00000547926 TNK2Q07912 1038 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 ZNF252P-AS1Q0IIN9 211 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 EFEMP1Q12805 493 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 GRM2Q14416 872 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 ZBTB37Q5TC79 503 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 IRF2BP1Q8IU81 584 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 CACNA2D2Q9NY47 1150 aa4.54□□□□□ -1.68
CEP290-204ENST00000547926 EPHB3P54753 998 aa4.53□□□□□ -1.68
CEP290-204ENST00000547926 PRPF40BQ6NWY9 871 aaKnown RBP4.53□□□□□ -1.68
CEP290-204ENST00000547926 PI16Q6UXB8 463 aa4.53□□□□□ -1.68
CEP290-204ENST00000547926 DACT3Q96B18 629 aaPredicted RBP4.53□□□□□ -1.68
CEP290-204ENST00000547926 MIPEPQ99797 713 aa4.53□□□□□ -1.68
CEP290-204ENST00000547926 USTQ9Y2C2 406 aa4.53□□□□□ -1.68
CEP290-204ENST00000547926 PRICKLE3O43900 615 aaPredicted RBP4.52□□□□□ -1.69
CEP290-204ENST00000547926 ZNF211Q13398 564 aaPredicted RBP4.52□□□□□ -1.69
CEP290-204ENST00000547926 ZNF385BQ569K4 471 aa4.52□□□□□ -1.69
CEP290-204ENST00000547926 RPS26P11Q5JNZ5 115 aaPredicted RBP4.52□□□□□ -1.69
CEP290-204ENST00000547926 SFRP5Q5T4F7 317 aa4.52□□□□□ -1.69
CEP290-204ENST00000547926 EPS8L3Q8TE67 593 aaKnown RBP4.52□□□□□ -1.69
CEP290-204ENST00000547926 TMEM39AQ9NV64 488 aa4.52□□□□□ -1.69
CEP290-204ENST00000547926 SLC22A31A6NKX4 558 aa4.52□□□□□ -1.69
CEP290-204ENST00000547926 SLBPQ14493 270 aaKnown RBP eCLIP4.52□□□□□ -1.69
CEP290-204ENST00000547926 TMEM132EQ6IEE7 984 aa4.52□□□□□ -1.69
CEP290-204ENST00000547926 ACSBG1Q96GR2 724 aa4.52□□□□□ -1.69
CEP290-204ENST00000547926 ZNF552Q9H707 407 aaPredicted RBP4.52□□□□□ -1.69
CEP290-204ENST00000547926 TEX51A0A1B0GUA7 166 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 SASH1O94885 1247 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 ARNTP27540 789 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 FCGRTP55899 365 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 XAGE3Q8WTP9 111 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 CCDC74AQ96AQ1 378 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 CRELD1Q96HD1 420 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 INTS4Q96HW7 963 aaKnown RBP4.51□□□□□ -1.69
CEP290-204ENST00000547926 BDH2Q9BUT1 245 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 SEMA7AO75326 666 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 ZGLP1P0C6A0 271 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 INPP5AQ14642 412 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 HHIPL2Q6UWX4 724 aa4.51□□□□□ -1.69
CEP290-204ENST00000547926 PEX10O60683 326 aa4.5□□□□□ -1.69
CEP290-204ENST00000547926 PAGE1O75459 146 aa4.5□□□□□ -1.69
CEP290-204ENST00000547926 FAM13AO94988 1023 aa4.5□□□□□ -1.69
CEP290-204ENST00000547926 AFF3P51826 1226 aaKnown RBP4.5□□□□□ -1.69
CEP290-204ENST00000547926 C22orf34Q6ZV56 151 aa4.5□□□□□ -1.69
CEP290-204ENST00000547926 CREG2Q8IUH2 290 aa4.5□□□□□ -1.69
CEP290-204ENST00000547926 SHISA4Q96DD7 197 aa4.5□□□□□ -1.69
CEP290-204ENST00000547926 CBX8Q9HC52 389 aa4.5□□□□□ -1.69
CEP290-204ENST00000547926 GADD45BO75293 160 aaPredicted RBP4.49□□□□□ -1.69
CEP290-204ENST00000547926 LRIG2O94898 1065 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 THAP5Q7Z6K1 395 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 PICK1Q9NRD5 415 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 ABL1P00519 1130 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 SDHBP21912 280 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 SERPINB4P48594 390 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 PLP2Q04941 152 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 PTPN11Q06124 597 aaPredicted RBP4.49□□□□□ -1.69
CEP290-204ENST00000547926 DTHD1Q6ZMT9 781 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 SIRT2Q8IXJ6 389 aa4.49□□□□□ -1.69
CEP290-204ENST00000547926 MBD1Q9UIS9 605 aaPredicted RBP4.49□□□□□ -1.69
CEP290-204ENST00000547926 YBX2Q9Y2T7 364 aaKnown RBP4.49□□□□□ -1.69
CEP290-204ENST00000547926 FANCGO15287 622 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 TNFRSF1AP19438 455 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 PDE6BP35913 854 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 CDK8P49336 464 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 CPNE3O75131 537 aaKnown RBP4.48□□□□□ -1.69
CEP290-204ENST00000547926 BMP6P22004 513 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 RTP5Q14D33 572 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 LETMD1Q6P1Q0 360 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 CDC37L1Q7L3B6 337 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 CCDC120Q96HB5 630 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 Q96M66 194 aa4.48□□□□□ -1.69
CEP290-204ENST00000547926 DUSP15Q9H1R2 295 aaPredicted RBP4.48□□□□□ -1.69
CEP290-204ENST00000547926 SLC6A17Q9H1V8 727 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms