RNA–Protein interactions for RNA: ENST00000547877.5

LETMD1-212, Transcript of LETM1 domain containing 1, humanhuman

TSL 5

Gene LETMD1, Length 2,020 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-212ENST00000547877 SWAP70Q9UH65 585 aa17.55■□□□□ 0.4
LETMD1-212ENST00000547877 RPS6KB1P23443 525 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 SHMT1P34896 483 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 NBPF12Q5TAG4 269 aaPredicted RBP17.54■□□□□ 0.4
LETMD1-212ENST00000547877 DHX32Q7L7V1 743 aaKnown RBP17.54■□□□□ 0.4
LETMD1-212ENST00000547877 CHST3Q7LGC8 479 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 TCEANC2Q96MN5 208 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 HERC5Q9UII4 1024 aaKnown RBP17.54■□□□□ 0.4
LETMD1-212ENST00000547877 CLEC11AQ9Y240 323 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 ADM5C9JUS6 153 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 RASA1P20936 1047 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 MCM5P33992 734 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 CYB5R4Q7L1T6 521 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 MIGA2Q7L4E1 593 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 GBP4Q96PP9 640 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 TAOK2Q9UL54 1235 aa17.54■□□□□ 0.4
LETMD1-212ENST00000547877 ANTXR2P58335 489 aa17.53■□□□□ 0.4
LETMD1-212ENST00000547877 EXOSC10Q01780 885 aaKnown RBP17.53■□□□□ 0.4
LETMD1-212ENST00000547877 FAM47AQ5JRC9 791 aa17.53■□□□□ 0.4
LETMD1-212ENST00000547877 DLK2Q6UY11 383 aa17.53■□□□□ 0.4
LETMD1-212ENST00000547877 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.53■□□□□ 0.4
LETMD1-212ENST00000547877 MYH8P13535 1937 aa17.53■□□□□ 0.4
LETMD1-212ENST00000547877 TSPY2A6NKD2 308 aa17.52■□□□□ 0.4
LETMD1-212ENST00000547877 TBC1D12O60347 775 aa17.52■□□□□ 0.4
LETMD1-212ENST00000547877 TATDN1Q6P1N9 297 aa17.52■□□□□ 0.4
LETMD1-212ENST00000547877 ZNF444Q8N0Y2 327 aaPredicted RBP17.52■□□□□ 0.4
LETMD1-212ENST00000547877 PRC1O43663 620 aa17.52■□□□□ 0.39
LETMD1-212ENST00000547877 MAP3K10Q02779 954 aa17.52■□□□□ 0.39
LETMD1-212ENST00000547877 USP48Q86UV5 1035 aa17.52■□□□□ 0.39
LETMD1-212ENST00000547877 TTC14Q96N46 770 aa17.52■□□□□ 0.39
LETMD1-212ENST00000547877 LRRC2Q9BYS8 371 aa17.52■□□□□ 0.39
LETMD1-212ENST00000547877 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.39
LETMD1-212ENST00000547877 NT5C2P49902 561 aa17.51■□□□□ 0.39
LETMD1-212ENST00000547877 NUCB2P80303 420 aa17.51■□□□□ 0.39
LETMD1-212ENST00000547877 TFAP4Q01664 338 aa17.51■□□□□ 0.39
LETMD1-212ENST00000547877 MAP1SQ66K74 1059 aaPredicted RBP17.51■□□□□ 0.39
LETMD1-212ENST00000547877 CDC37L1Q7L3B6 337 aa17.51■□□□□ 0.39
LETMD1-212ENST00000547877 LDHDQ86WU2 507 aa17.51■□□□□ 0.39
LETMD1-212ENST00000547877 GLIS2Q9BZE0 524 aaPredicted RBP17.51■□□□□ 0.39
LETMD1-212ENST00000547877 TSPY3P0CV98 308 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 TSPY8P0CW00 308 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 ZKSCAN3Q9BRR0 538 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 GPBP1L1Q9HC44 474 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-212ENST00000547877 WDR19Q8NEZ3 1342 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 SSC5DA1L4H1 1573 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 SUPT20HL1Q3ZLR7 823 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 CERKLQ49MI3 558 aaPredicted RBP17.5■□□□□ 0.39
LETMD1-212ENST00000547877 IQCA1Q86XH1 822 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 TNPO1Q92973 898 aaKnown RBP17.5■□□□□ 0.39
LETMD1-212ENST00000547877 HOOK2Q96ED9 719 aa17.5■□□□□ 0.39
LETMD1-212ENST00000547877 AKR1B1P15121 316 aa17.49■□□□□ 0.39
LETMD1-212ENST00000547877 AK2P54819 239 aa17.49■□□□□ 0.39
LETMD1-212ENST00000547877 Q6ZUG5 572 aa17.49■□□□□ 0.39
LETMD1-212ENST00000547877 UBAC1Q9BSL1 405 aa17.49■□□□□ 0.39
LETMD1-212ENST00000547877 NMT2O60551 498 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 FGD1P98174 961 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 RRP1BQ14684 758 aaKnown RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 SKOR2Q2VWA4 1001 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 DCAF15Q66K64 600 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 CCDC17Q96LX7 622 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 IFIT3O14879 490 aaKnown RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 GDF11O95390 407 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 TOB2Q14106 344 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 SART3Q15020 963 aaKnown RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 SHROOM1Q2M3G4 852 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 NEDD1Q8NHV4 660 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 IGDCC4Q8TDY8 1250 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 CDCA5Q96FF9 252 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 TMEM87BQ96K49 555 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 ZSCAN10Q96SZ4 725 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 ALDH8A1Q9H2A2 487 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 GPHNQ9NQX3 736 aaPredicted RBP17.48■□□□□ 0.39
LETMD1-212ENST00000547877 IL17RBQ9NRM6 502 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 FZD1Q9UP38 647 aa17.48■□□□□ 0.39
LETMD1-212ENST00000547877 TNKSO95271 1327 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 MPHOSPH10O00566 681 aaKnown RBP17.47■□□□□ 0.39
LETMD1-212ENST00000547877 FBXL16Q8N461 479 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 MTA3Q9BTC8 594 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.47■□□□□ 0.39
LETMD1-212ENST00000547877 AGXT2Q9BYV1 514 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 ANGEL1Q9UNK9 670 aaKnown RBP17.47■□□□□ 0.39
LETMD1-212ENST00000547877 PLIN4Q96Q06 1357 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 ERICH2A1L162 156 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 ABCB5Q2M3G0 1257 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 TMEM67Q5HYA8 995 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 NOL8Q76FK4 1167 aaKnown RBP17.47■□□□□ 0.39
LETMD1-212ENST00000547877 ENAHQ8N8S7 591 aaPredicted RBP17.47■□□□□ 0.39
LETMD1-212ENST00000547877 BRF1Q92994 677 aa17.47■□□□□ 0.39
LETMD1-212ENST00000547877 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
LETMD1-212ENST00000547877 SH2B2O14492 632 aaPredicted RBP17.46■□□□□ 0.39
LETMD1-212ENST00000547877 JAG1P78504 1218 aa17.46■□□□□ 0.39
LETMD1-212ENST00000547877 ANKRD1Q15327 319 aa17.46■□□□□ 0.39
LETMD1-212ENST00000547877 ZNF341Q9BYN7 854 aa17.46■□□□□ 0.39
LETMD1-212ENST00000547877 TCP11L1Q9NUJ3 509 aa17.46■□□□□ 0.39
LETMD1-212ENST00000547877 TRAF5O00463 557 aa17.45■□□□□ 0.38
LETMD1-212ENST00000547877 TRAK2O60296 914 aa17.45■□□□□ 0.38
LETMD1-212ENST00000547877 CAP2P40123 477 aa17.45■□□□□ 0.38
LETMD1-212ENST00000547877 PRKG1Q13976 671 aa17.45■□□□□ 0.38
LETMD1-212ENST00000547877 SEC23AQ15436 765 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms