RNA–Protein interactions for RNA: ENST00000547247.5

SMARCD1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 1 (best)

Gene SMARCD1, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-203ENST00000547247 AKNAD1Q5T1N1 836 aa27.49■■□□□ 1.99
SMARCD1-203ENST00000547247 NBPF3Q9H094 633 aa27.49■■□□□ 1.99
SMARCD1-203ENST00000547247 RNF41Q9H4P4 317 aaPredicted RBP27.49■■□□□ 1.99
SMARCD1-203ENST00000547247 GINM1Q9NU53 330 aa27.49■■□□□ 1.99
SMARCD1-203ENST00000547247 MYH8P13535 1937 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 PRDM1O75626 825 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 CYP21A2P08686 494 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 FGRP09769 529 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 PCP11498 1178 aaKnown RBP27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 ABCB5Q2M3G0 1257 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 MFSD6Q6ZSS7 791 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 ZNF444Q8N0Y2 327 aaPredicted RBP27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 STAG1Q8WVM7 1258 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 CABP5Q9NP86 173 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 LAMA4Q16363 1823 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 EPB41L2O43491 1005 aaKnown RBP27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 RASA1P20936 1047 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 VEGFBP49765 207 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 NECTIN1Q15223 517 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 C8orf34Q49A92 452 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 TBC1D10CQ8IV04 446 aa27.48■■□□□ 1.99
SMARCD1-203ENST00000547247 MPHOSPH10O00566 681 aaKnown RBP27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 GH2P01242 217 aa27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 CYP4F22Q6NT55 531 aa27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 ERO1BQ86YB8 467 aa27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 INCENPQ9NQS7 918 aa27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 TOMM22Q9NS69 142 aa27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 ZBTB21Q9ULJ3 1066 aa27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 TACC3Q9Y6A5 838 aa27.47■■□□□ 1.99
SMARCD1-203ENST00000547247 DOCK1Q14185 1865 aa27.46■■□□□ 1.99
SMARCD1-203ENST00000547247 ORC4O43929 436 aa27.46■■□□□ 1.99
SMARCD1-203ENST00000547247 JAG1P78504 1218 aa27.46■■□□□ 1.99
SMARCD1-203ENST00000547247 GRM1Q13255 1194 aa27.46■■□□□ 1.99
SMARCD1-203ENST00000547247 CCDC102AQ96A19 550 aa27.46■■□□□ 1.99
SMARCD1-203ENST00000547247 SPDYE5A6NIY4 337 aa27.45■■□□□ 1.99
SMARCD1-203ENST00000547247 AKR1B1P15121 316 aa27.45■■□□□ 1.99
SMARCD1-203ENST00000547247 PTPRAP18433 802 aa27.45■■□□□ 1.99
SMARCD1-203ENST00000547247 SHROOM1Q2M3G4 852 aaPredicted RBP27.45■■□□□ 1.99
SMARCD1-203ENST00000547247 RNF20Q5VTR2 975 aa27.45■■□□□ 1.99
SMARCD1-203ENST00000547247 CREB3L3Q68CJ9 461 aa27.45■■□□□ 1.99
SMARCD1-203ENST00000547247 CAPNS2Q96L46 248 aa27.45■■□□□ 1.99
SMARCD1-203ENST00000547247 SLC27A2O14975 620 aa27.44■■□□□ 1.98
SMARCD1-203ENST00000547247 TMEM179Q6ZVK1 233 aa27.44■■□□□ 1.98
SMARCD1-203ENST00000547247 RASAL3Q86YV0 1011 aa27.44■■□□□ 1.98
SMARCD1-203ENST00000547247 OPTNQ96CV9 577 aa27.44■■□□□ 1.98
SMARCD1-203ENST00000547247 ATAD5Q96QE3 1844 aa27.44■■□□□ 1.98
SMARCD1-203ENST00000547247 WDR33Q9C0J8 1336 aaKnown RBP27.44■■□□□ 1.98
SMARCD1-203ENST00000547247 PCNTO95613 3336 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 ECE1P42892 770 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 PPATQ06203 517 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 RRP12Q5JTH9 1297 aaKnown RBP27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 CNKSR2Q8WXI2 1034 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 WNK4Q96J92 1243 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 USP26Q9BXU7 913 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 FRMD4AQ9P2Q2 1039 aaPredicted RBP27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 USP17L5A8MUK1 530 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 RANBP6O60518 1105 aaKnown RBP27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 SLC10A3P09131 477 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 RAB3GAP1Q15042 981 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 OTUD5Q96G74 571 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 ZHX2Q9Y6X8 837 aa27.43■■□□□ 1.98
SMARCD1-203ENST00000547247 TSPY3P0CV98 308 aa27.42■■□□□ 1.98
SMARCD1-203ENST00000547247 TSPY8P0CW00 308 aa27.42■■□□□ 1.98
SMARCD1-203ENST00000547247 SPRYD7Q5W111 196 aa27.42■■□□□ 1.98
SMARCD1-203ENST00000547247 CNNM2Q9H8M5 875 aa27.42■■□□□ 1.98
SMARCD1-203ENST00000547247 NEDD4P46934 1319 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 TSPY2A6NKD2 308 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 ZBTB48P10074 688 aaPredicted RBP27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 NT5C2P49902 561 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 TFAP4Q01664 338 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 PPIL2Q13356 520 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 SEPT2Q15019 361 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 FAM47AQ5JRC9 791 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 CCDC84Q86UT8 332 aaPredicted RBP27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 JMYQ8N9B5 988 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 TBC1D2Q9BYX2 928 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 KRT23Q9C075 422 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 TAF6LQ9Y6J9 622 aa27.41■■□□□ 1.98
SMARCD1-203ENST00000547247 FAM155AB1AL88 458 aaPredicted RBP27.4■■□□□ 1.98
SMARCD1-203ENST00000547247 E7EWF7 191 aa27.4■■□□□ 1.98
SMARCD1-203ENST00000547247 GUCY1A2P33402 732 aa27.4■■□□□ 1.98
SMARCD1-203ENST00000547247 TRDNQ13061 729 aa27.4■■□□□ 1.98
SMARCD1-203ENST00000547247 ESR2Q92731 530 aa27.4■■□□□ 1.98
SMARCD1-203ENST00000547247 AS3MTQ9HBK9 375 aa27.4■■□□□ 1.98
SMARCD1-203ENST00000547247 THSD7BQ9C0I4 1608 aa27.39■■□□□ 1.98
SMARCD1-203ENST00000547247 SEC24BO95487 1268 aa27.39■■□□□ 1.98
SMARCD1-203ENST00000547247 ZKSCAN1P17029 563 aaPredicted RBP27.39■■□□□ 1.98
SMARCD1-203ENST00000547247 HSPA4P34932 840 aa27.39■■□□□ 1.98
SMARCD1-203ENST00000547247 GJA5P36382 358 aa27.39■■□□□ 1.98
SMARCD1-203ENST00000547247 NEDD1Q8NHV4 660 aa27.39■■□□□ 1.98
SMARCD1-203ENST00000547247 IRF6O14896 467 aa27.39■■□□□ 1.97
SMARCD1-203ENST00000547247 MKRN3Q13064 507 aaKnown RBP27.39■■□□□ 1.97
SMARCD1-203ENST00000547247 GNL3Q9BVP2 549 aaKnown RBP eCLIP27.39■■□□□ 1.97
SMARCD1-203ENST00000547247 AFG3L2Q9Y4W6 797 aa27.39■■□□□ 1.97
SMARCD1-203ENST00000547247 B4E1Z4 1266 aa27.38■■□□□ 1.97
SMARCD1-203ENST00000547247 ZNF280CQ8ND82 737 aa27.38■■□□□ 1.97
SMARCD1-203ENST00000547247 WDR18Q9BV38 432 aa27.38■■□□□ 1.97
SMARCD1-203ENST00000547247 KANSL2Q9H9L4 492 aa27.38■■□□□ 1.97
SMARCD1-203ENST00000547247 PLIN4Q96Q06 1357 aa27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms