RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 HPS5Q9UPZ3 1129 aa18.49■□□□□ 0.55
SSH1-204ENST00000546697 TRIM75PA6NK02 468 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 C19orf81C9J6K1 198 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 MBD4O95243 580 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 CHGBP05060 677 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 BACE1P56817 501 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 LACTBP83111 547 aaPredicted RBP18.48■□□□□ 0.55
SSH1-204ENST00000546697 SLFNL1Q499Z3 407 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 CD99L2Q8TCZ2 262 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 APPBP2Q92624 585 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 C12orf42Q96LP6 360 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 STRBPQ96SI9 672 aaKnown RBP18.48■□□□□ 0.55
SSH1-204ENST00000546697 ARMT1Q9H993 441 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 PTPN22Q9Y2R2 807 aa18.48■□□□□ 0.55
SSH1-204ENST00000546697 HOXA7P31268 230 aaPredicted RBP18.47■□□□□ 0.55
SSH1-204ENST00000546697 PRMT2P55345 433 aa18.47■□□□□ 0.55
SSH1-204ENST00000546697 CCDC84Q86UT8 332 aaPredicted RBP18.47■□□□□ 0.55
SSH1-204ENST00000546697 SDR42E1Q8WUS8 393 aa18.47■□□□□ 0.55
SSH1-204ENST00000546697 OSBP2Q969R2 916 aa18.47■□□□□ 0.55
SSH1-204ENST00000546697 RWDD1Q9H446 243 aaPredicted RBP18.47■□□□□ 0.55
SSH1-204ENST00000546697 EFCC1Q9HA90 598 aa18.47■□□□□ 0.55
SSH1-204ENST00000546697 MCM9Q9NXL9 1143 aa18.47■□□□□ 0.55
SSH1-204ENST00000546697 SWAP70Q9UH65 585 aa18.47■□□□□ 0.55
SSH1-204ENST00000546697 RNF113AO15541 343 aaKnown RBP18.46■□□□□ 0.55
SSH1-204ENST00000546697 LRRFIP1Q32MZ4 808 aaKnown RBP18.46■□□□□ 0.55
SSH1-204ENST00000546697 SBK1Q52WX2 424 aa18.46■□□□□ 0.55
SSH1-204ENST00000546697 C12orf60Q5U649 245 aa18.46■□□□□ 0.55
SSH1-204ENST00000546697 TSHZ3Q63HK5 1081 aa18.46■□□□□ 0.55
SSH1-204ENST00000546697 EXOC6Q8TAG9 804 aa18.46■□□□□ 0.55
SSH1-204ENST00000546697 TRIM34Q9BYJ4 488 aa18.46■□□□□ 0.55
SSH1-204ENST00000546697 TRIM17Q9Y577 477 aa18.46■□□□□ 0.55
SSH1-204ENST00000546697 USP17L10C9JJH3 530 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 PRKAB2O43741 272 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 GUCY1A2P33402 732 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 PDE1AP54750 535 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 SHROOM1Q2M3G4 852 aaPredicted RBP18.45■□□□□ 0.54
SSH1-204ENST00000546697 CERKLQ49MI3 558 aaPredicted RBP18.45■□□□□ 0.54
SSH1-204ENST00000546697 TREML2Q5T2D2 321 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 ANKRD45Q5TZF3 282 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 ARMC5Q96C12 935 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 OSBPL3Q9H4L5 887 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 PNMA3Q9UL41 463 aa18.45■□□□□ 0.54
SSH1-204ENST00000546697 SUPT16HQ9Y5B9 1047 aaKnown RBP18.45■□□□□ 0.54
SSH1-204ENST00000546697 ROBO3Q96MS0 1386 aa18.44■□□□□ 0.54
SSH1-204ENST00000546697 GDF11O95390 407 aa18.44■□□□□ 0.54
SSH1-204ENST00000546697 GH2P01242 217 aa18.44■□□□□ 0.54
SSH1-204ENST00000546697 POLR3DP05423 398 aaPredicted RBP18.44■□□□□ 0.54
SSH1-204ENST00000546697 CYP2C8P10632 490 aa18.44■□□□□ 0.54
SSH1-204ENST00000546697 HMGCS2P54868 508 aa18.44■□□□□ 0.54
SSH1-204ENST00000546697 PABPC4Q13310 644 aaKnown RBP eCLIP18.44■□□□□ 0.54
SSH1-204ENST00000546697 KIAA1683Q9H0B3 1180 aa18.44■□□□□ 0.54
SSH1-204ENST00000546697 BRCA2P51587 3418 aa18.44■□□□□ 0.54
SSH1-204ENST00000546697 GSG1L2A8MUP6 293 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 IGHDP01880 384 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 GNAT2P19087 354 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 CTGFP29279 349 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 NUCB1Q02818 461 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 EVX2Q03828 476 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 ZMYM1Q5SVZ6 1142 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 GADL1Q6ZQY3 521 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 C16orf86Q6ZW13 317 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 ARPP21Q9UBL0 812 aaPredicted RBP18.43■□□□□ 0.54
SSH1-204ENST00000546697 CPA4Q9UI42 421 aa18.43■□□□□ 0.54
SSH1-204ENST00000546697 BAZ2AQ9UIF9 1905 aaKnown RBP18.43■□□□□ 0.54
SSH1-204ENST00000546697 RBBP6Q7Z6E9 1792 aaKnown RBP18.42■□□□□ 0.54
SSH1-204ENST00000546697 GCLCP48506 637 aaPredicted RBP18.42■□□□□ 0.54
SSH1-204ENST00000546697 MTMR2Q13614 643 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 KIF22Q14807 665 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 FAM110CQ1W6H9 321 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 ABCB5Q2M3G0 1257 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 CTR9Q6PD62 1173 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 CCDC17Q96LX7 622 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 EMILIN3Q9NT22 766 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 MORF4L1Q9UBU8 362 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 SLC4A4Q9Y6R1 1079 aa18.42■□□□□ 0.54
SSH1-204ENST00000546697 GREB1LQ9C091 1923 aaPredicted RBP18.41■□□□□ 0.54
SSH1-204ENST00000546697 CCDC85CA6NKD9 419 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 USP17L12C9JPN9 530 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 USP17L21D6R901 530 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 GPAA1O43292 621 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 CYP2D6P10635 497 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 EVI5LQ96CN4 794 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 TRIM47Q96LD4 638 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 ARHGAP39Q9C0H5 1083 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 BCL11AQ9H165 835 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 ZSWIM8A7E2V4 1837 aa18.41■□□□□ 0.54
SSH1-204ENST00000546697 TNRC18O15417 2968 aaPredicted RBP18.4■□□□□ 0.54
SSH1-204ENST00000546697 USP14P54578 494 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 SLC4A8Q2Y0W8 1093 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 USP17L2Q6R6M4 530 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 LBX2Q6XYB7 198 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 TMEM179Q6ZVK1 233 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 CHD1LQ86WJ1 897 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 DDRGK1Q96HY6 314 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 ASCC2Q9H1I8 757 aaPredicted RBP18.4■□□□□ 0.54
SSH1-204ENST00000546697 EPB41L4AQ9HCS5 686 aaPredicted RBP18.4■□□□□ 0.54
SSH1-204ENST00000546697 CABP5Q9NP86 173 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 SRRDQ9UH36 339 aa18.4■□□□□ 0.54
SSH1-204ENST00000546697 MGAMO43451 1857 aa18.39■□□□□ 0.54
SSH1-204ENST00000546697 PSMC4P43686 418 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms