RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 MFSD14CQ5VZR4 134 aa13.48□□□□□ -0.25
TMEM116-203ENST00000546537 CCAR1Q8IX12 1150 aaKnown RBP13.48□□□□□ -0.25
TMEM116-203ENST00000546537 SLF2Q8IX21 1173 aa13.48□□□□□ -0.25
TMEM116-203ENST00000546537 EDC3Q96F86 508 aaKnown RBP13.48□□□□□ -0.25
TMEM116-203ENST00000546537 PDLIM7Q9NR12 457 aa13.48□□□□□ -0.25
TMEM116-203ENST00000546537 TMOD4Q9NZQ9 345 aa13.48□□□□□ -0.25
TMEM116-203ENST00000546537 SIPA1L1O43166 1804 aa13.48□□□□□ -0.25
TMEM116-203ENST00000546537 TRIM43BA6NCK2 446 aa13.47□□□□□ -0.25
TMEM116-203ENST00000546537 CNGA1P29973 690 aa13.47□□□□□ -0.25
TMEM116-203ENST00000546537 RHBDL3P58872 404 aa13.47□□□□□ -0.25
TMEM116-203ENST00000546537 DDX10Q13206 875 aaKnown RBP13.47□□□□□ -0.25
TMEM116-203ENST00000546537 POTEEQ6S8J3 1075 aa13.47□□□□□ -0.25
TMEM116-203ENST00000546537 DZIP1Q86YF9 867 aaKnown RBP13.47□□□□□ -0.25
TMEM116-203ENST00000546537 ADAMTS19Q8TE59 1207 aa13.47□□□□□ -0.25
TMEM116-203ENST00000546537 GTF3C2Q8WUA4 911 aaPredicted RBP13.47□□□□□ -0.25
TMEM116-203ENST00000546537 TRIM43Q96BQ3 446 aaPredicted RBP13.47□□□□□ -0.25
TMEM116-203ENST00000546537 ASB2Q96Q27 587 aa13.47□□□□□ -0.25
TMEM116-203ENST00000546537 MROH7-TTC4A0A0A0MT08 1334 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 SYNGAP1Q96PV0 1343 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 GPR75-ASB3A0A0A6YYF3 556 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 C19orf81C9J6K1 198 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 PHKA1P46020 1223 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 RFX5P48382 616 aaPredicted RBP13.46□□□□□ -0.25
TMEM116-203ENST00000546537 TRIM60Q495X7 471 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 GJC2Q5T442 439 aaPredicted RBP13.46□□□□□ -0.25
TMEM116-203ENST00000546537 ATG9AQ7Z3C6 839 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 SH3RF1Q7Z6J0 888 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 ARRDC4Q8NCT1 418 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 RNPC3Q96LT9 517 aaKnown RBP13.46□□□□□ -0.25
TMEM116-203ENST00000546537 UHRF1Q96T88 793 aaPredicted RBP13.46□□□□□ -0.25
TMEM116-203ENST00000546537 PAGR1Q9BTK6 254 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 PRKRIP1Q9H875 184 aaPredicted RBP13.46□□□□□ -0.25
TMEM116-203ENST00000546537 THEGQ9P2T0 379 aa13.46□□□□□ -0.25
TMEM116-203ENST00000546537 ARIH1Q9Y4X5 557 aaPredicted RBP13.46□□□□□ -0.25
TMEM116-203ENST00000546537 DNAJB2P25686 324 aa13.45□□□□□ -0.26
TMEM116-203ENST00000546537 ATP2B3Q16720 1220 aa13.45□□□□□ -0.26
TMEM116-203ENST00000546537 NCBP3Q53F19 620 aaKnown RBP13.45□□□□□ -0.26
TMEM116-203ENST00000546537 C1orf53Q5VUE5 145 aa13.45□□□□□ -0.26
TMEM116-203ENST00000546537 TRPV1Q8NER1 839 aa13.45□□□□□ -0.26
TMEM116-203ENST00000546537 ZNF576Q9H609 170 aa13.45□□□□□ -0.26
TMEM116-203ENST00000546537 ABCF2Q9UG63 623 aa13.45□□□□□ -0.26
TMEM116-203ENST00000546537 HERC5Q9UII4 1024 aaKnown RBP13.45□□□□□ -0.26
TMEM116-203ENST00000546537 BDP1A6H8Y1 2624 aa13.45□□□□□ -0.26
TMEM116-203ENST00000546537 NCOR1O75376 2440 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.44□□□□□ -0.26
TMEM116-203ENST00000546537 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.44□□□□□ -0.26
TMEM116-203ENST00000546537 SLC15A5A6NIM6 579 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 USP17L10C9JJH3 530 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 KBTBD13C9JR72 458 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 GLRX3O76003 335 aaKnown RBP13.44□□□□□ -0.26
TMEM116-203ENST00000546537 MAP4K4O95819 1239 aaPredicted RBP13.44□□□□□ -0.26
TMEM116-203ENST00000546537 IGHA2P01877 340 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 ASNSP08243 561 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 HOXC6P09630 235 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 CYBAP13498 195 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 PTPREP23469 700 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 ITGB8P26012 769 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 EPHB4P54760 987 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 ATP2B2Q01814 1243 aa13.44□□□□□ -0.26
TMEM116-203ENST00000546537 CWC22Q9HCG8 908 aaKnown RBP13.44□□□□□ -0.26
TMEM116-203ENST00000546537 PDS5AQ29RF7 1337 aaKnown RBP13.43□□□□□ -0.26
TMEM116-203ENST00000546537 CNMDO75829 334 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 CYP2C19P33261 490 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 JAG1P78504 1218 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 MRPS5P82675 430 aaKnown RBP13.43□□□□□ -0.26
TMEM116-203ENST00000546537 AKNAD1Q5T1N1 836 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 SPTY2D1Q68D10 685 aaPredicted RBP13.43□□□□□ -0.26
TMEM116-203ENST00000546537 CCDC102BQ68D86 513 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 NPLOC4Q8TAT6 608 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 ZNF384Q8TF68 577 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 PPM1EQ8WY54 764 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 C1QTNF1Q9BXJ1 281 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 PLXNA1Q9UIW2 1896 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 RABGAP1Q9Y3P9 1069 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 NDUFB9Q9Y6M9 179 aa13.43□□□□□ -0.26
TMEM116-203ENST00000546537 ZNF236Q9UL36 1845 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 CCNA1P78396 465 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 MECOMQ03112 1051 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 RASGRF1Q13972 1273 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 GRB14Q14449 540 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 TIFAQ96CG3 184 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 GAS2L1Q99501 681 aaPredicted RBP13.42□□□□□ -0.26
TMEM116-203ENST00000546537 EMILIN3Q9NT22 766 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 CEP126Q9P2H0 1117 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 FBXO3Q9UK99 471 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 TACC3Q9Y6A5 838 aa13.42□□□□□ -0.26
TMEM116-203ENST00000546537 TCF20Q9UGU0 1960 aaKnown RBP13.41□□□□□ -0.26
TMEM116-203ENST00000546537 CIAO1O76071 339 aa13.41□□□□□ -0.26
TMEM116-203ENST00000546537 ADCYAP1R1P41586 468 aa13.41□□□□□ -0.26
TMEM116-203ENST00000546537 TLE2Q04725 743 aa13.41□□□□□ -0.26
TMEM116-203ENST00000546537 WDR63Q8IWG1 891 aa13.41□□□□□ -0.26
TMEM116-203ENST00000546537 USP44Q9H0E7 712 aa13.41□□□□□ -0.26
TMEM116-203ENST00000546537 PI4KBQ9UBF8 816 aa13.41□□□□□ -0.26
TMEM116-203ENST00000546537 CDK5RAP2Q96SN8 1893 aa13.41□□□□□ -0.26
TMEM116-203ENST00000546537 CLTBP09497 229 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 ADORA1P30542 326 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 FPGSQ05932 587 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 WDR78Q5VTH9 848 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 ANO1Q5XXA6 986 aa13.4□□□□□ -0.26
TMEM116-203ENST00000546537 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms