RNA–Protein interactions for RNA: ENST00000546417.5

BRF1-207, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 3

Gene BRF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-207ENST00000546417 C9orf50Q5SZB4 431 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 PORCNQ9H237 461 aa14.93□□□□□ -0.02
BRF1-207ENST00000546417 CWC22Q9HCG8 908 aaKnown RBP14.93□□□□□ -0.02
BRF1-207ENST00000546417 DDX20Q9UHI6 824 aaKnown RBP14.93□□□□□ -0.02
BRF1-207ENST00000546417 HERC5Q9UII4 1024 aaKnown RBP14.93□□□□□ -0.02
BRF1-207ENST00000546417 GLRX3O76003 335 aaKnown RBP14.92□□□□□ -0.02
BRF1-207ENST00000546417 CIAO1O76071 339 aa14.92□□□□□ -0.02
BRF1-207ENST00000546417 MAP2K5Q13163 448 aa14.92□□□□□ -0.02
BRF1-207ENST00000546417 Q3C1V9 767 aa14.92□□□□□ -0.02
BRF1-207ENST00000546417 EDC3Q96F86 508 aaKnown RBP14.92□□□□□ -0.02
BRF1-207ENST00000546417 USP44Q9H0E7 712 aa14.92□□□□□ -0.02
BRF1-207ENST00000546417 ATP11BQ9Y2G3 1177 aa14.92□□□□□ -0.02
BRF1-207ENST00000546417 PDS5AQ29RF7 1337 aaKnown RBP14.92□□□□□ -0.02
BRF1-207ENST00000546417 ASNSP08243 561 aa14.91□□□□□ -0.02
BRF1-207ENST00000546417 CNGA1P29973 690 aa14.91□□□□□ -0.02
BRF1-207ENST00000546417 PLA2G5P39877 138 aa14.91□□□□□ -0.02
BRF1-207ENST00000546417 RRP1BQ14684 758 aaKnown RBP14.91□□□□□ -0.02
BRF1-207ENST00000546417 CCDC102BQ68D86 513 aa14.91□□□□□ -0.02
BRF1-207ENST00000546417 PAGR1Q9BTK6 254 aa14.91□□□□□ -0.02
BRF1-207ENST00000546417 RLFQ13129 1914 aa14.91□□□□□ -0.02
BRF1-207ENST00000546417 USP17L10C9JJH3 530 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 LDHCP07864 332 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 CCNA1P78396 465 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 MECOMQ03112 1051 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 RASGRF1Q13972 1273 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 SLC39A5Q6ZMH5 540 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 ERICH6Q7L0X2 663 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 ARRDC4Q8NCT1 418 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 BADQ92934 168 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 FAM122AQ96E09 287 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 SIL1Q9H173 461 aa14.9□□□□□ -0.02
BRF1-207ENST00000546417 PRDM5Q9NQX1 630 aaPredicted RBP14.9□□□□□ -0.02
BRF1-207ENST00000546417 SALL2Q9Y467 1007 aaPredicted RBP14.9□□□□□ -0.02
BRF1-207ENST00000546417 MUC3AQ02505 3323 aa14.89□□□□□ -0.03
BRF1-207ENST00000546417 GSTO1P78417 241 aa14.89□□□□□ -0.03
BRF1-207ENST00000546417 ATP2B2Q01814 1243 aa14.89□□□□□ -0.03
BRF1-207ENST00000546417 PI4KBQ9UBF8 816 aa14.89□□□□□ -0.03
BRF1-207ENST00000546417 CDH23Q9H251 3354 aa14.88□□□□□ -0.03
BRF1-207ENST00000546417 KBTBD13C9JR72 458 aa14.88□□□□□ -0.03
BRF1-207ENST00000546417 DHX36Q9H2U1 1008 aaKnown RBP14.88□□□□□ -0.03
BRF1-207ENST00000546417 GINM1Q9NU53 330 aa14.88□□□□□ -0.03
BRF1-207ENST00000546417 FLRT1Q9NZU1 646 aa14.88□□□□□ -0.03
BRF1-207ENST00000546417 RAPGEFL1Q9UHV5 662 aa14.88□□□□□ -0.03
BRF1-207ENST00000546417 RABGAP1Q9Y3P9 1069 aa14.88□□□□□ -0.03
BRF1-207ENST00000546417 SLC15A5A6NIM6 579 aa14.87□□□□□ -0.03
BRF1-207ENST00000546417 HOXC6P09630 235 aa14.87□□□□□ -0.03
BRF1-207ENST00000546417 PTPREP23469 700 aa14.87□□□□□ -0.03
BRF1-207ENST00000546417 ADORA1P30542 326 aa14.87□□□□□ -0.03
BRF1-207ENST00000546417 IL15P40933 162 aaPredicted RBP14.87□□□□□ -0.03
BRF1-207ENST00000546417 GJC2Q5T442 439 aaPredicted RBP14.87□□□□□ -0.03
BRF1-207ENST00000546417 RNPC3Q96LT9 517 aaKnown RBP14.87□□□□□ -0.03
BRF1-207ENST00000546417 IVNS1ABPQ9Y6Y0 642 aa14.87□□□□□ -0.03
BRF1-207ENST00000546417 PTPRCP08575 1304 aa14.87□□□□□ -0.03
BRF1-207ENST00000546417 GRIN2CQ14957 1233 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 SNX17Q15036 470 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 TRIM60Q495X7 471 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 WDR78Q5VTH9 848 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 USP17L2Q6R6M4 530 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 USP38Q8NB14 1042 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 ZNF384Q8TF68 577 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 ATXN2LQ8WWM7 1075 aaKnown RBP14.86□□□□□ -0.03
BRF1-207ENST00000546417 PDLIM7Q9NR12 457 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 NDUFB9Q9Y6M9 179 aa14.86□□□□□ -0.03
BRF1-207ENST00000546417 CYP2C19P33261 490 aa14.85□□□□□ -0.03
BRF1-207ENST00000546417 TIMM10P62072 90 aa14.85□□□□□ -0.03
BRF1-207ENST00000546417 CCDC184Q52MB2 194 aa14.85□□□□□ -0.03
BRF1-207ENST00000546417 POTEEQ6S8J3 1075 aa14.85□□□□□ -0.03
BRF1-207ENST00000546417 FOXP4Q8IVH2 680 aaPredicted RBP14.85□□□□□ -0.03
BRF1-207ENST00000546417 TEX11Q8IYF3 940 aa14.85□□□□□ -0.03
BRF1-207ENST00000546417 NCOR1O75376 2440 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.84□□□□□ -0.03
BRF1-207ENST00000546417 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.84□□□□□ -0.03
BRF1-207ENST00000546417 TRIM43BA6NCK2 446 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 CYBAP13498 195 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 DNAJB2P25686 324 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 JAG1P78504 1218 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 GRB14Q14449 540 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 C1orf53Q5VUE5 145 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 SH3RF1Q7Z6J0 888 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 CRACR2BQ8N4Y2 399 aaPredicted RBP14.84□□□□□ -0.03
BRF1-207ENST00000546417 TRPV1Q8NER1 839 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 NPLOC4Q8TAT6 608 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 TRIM43Q96BQ3 446 aaPredicted RBP14.84□□□□□ -0.03
BRF1-207ENST00000546417 NSUN4Q96CB9 384 aaKnown RBP14.84□□□□□ -0.03
BRF1-207ENST00000546417 NOL10Q9BSC4 688 aaKnown RBP14.84□□□□□ -0.03
BRF1-207ENST00000546417 TRIM34Q9BYJ4 488 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 EMILIN3Q9NT22 766 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 TACC3Q9Y6A5 838 aa14.84□□□□□ -0.03
BRF1-207ENST00000546417 SIPA1L1O43166 1804 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L15C9J2P7 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L13C9JLJ4 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L11C9JVI0 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L18D6R9N7 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L22D6RA61 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L17D6RBQ6 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L19D6RCP7 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L20D6RJB6 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 USP17L24Q0WX57 530 aa14.83□□□□□ -0.04
BRF1-207ENST00000546417 MVPQ14764 893 aaKnown RBP14.83□□□□□ -0.04
BRF1-207ENST00000546417 METTL16Q86W50 562 aaKnown RBP14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms