RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	DCPS	Q96C86	337 aa	Known RBP	11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	CHMP4C	Q96CF2	233 aa		11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	HOOK2	Q96ED9	719 aa		11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	TMX3	Q96JJ7	454 aa		11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	GGA3	Q9NZ52	723 aa		11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	ANGEL1	Q9UNK9	670 aa	Known RBP	11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	PPP2R3B	Q9Y5P8	575 aa		11.8	□□□□□ -0.52
NPIPA1-208	ENST00000545831	CNTNAP1	P78357	1384 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	CCDC69	A6NI79	296 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	SLC4A3	P48751	1232 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	HIRA	P54198	1017 aa	Predicted RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	PPP4R3B	Q5MIZ7	849 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	METTL16	Q86W50	562 aa	Known RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	NEDD1	Q8NHV4	660 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	ZNF274	Q96GC6	653 aa	Predicted RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	ZKSCAN3	Q9BRR0	538 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	LARP6	Q9BRS8	491 aa	Known RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	TMEM39B	Q9GZU3	492 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	DEFB129	Q9H1M3	183 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	SLK	Q9H2G2	1235 aa	Predicted RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	TCP11L1	Q9NUJ3	509 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	NAP1L2	Q9ULW6	460 aa	Predicted RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	DDX60L	Q5H9U9	1706 aa	Known RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	ASTN2	O75129	1339 aa	Predicted RBP	11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	TNKS	O95271	1327 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	PITPNM2	Q9BZ72	1349 aa		11.79	□□□□□ -0.52
NPIPA1-208	ENST00000545831	TBC1D12	O60347	775 aa		11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	APOBR	Q0VD83	1088 aa		11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	CERKL	Q49MI3	558 aa	Predicted RBP	11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	IFIT1B	Q5T764	474 aa	Known RBP	11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	PNMA8A	Q86V59	439 aa	Predicted RBP	11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	DGKH	Q86XP1	1220 aa		11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	ZC3H15	Q8WU90	426 aa	Known RBP	11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	TPCN1	Q9ULQ1	816 aa		11.78	□□□□□ -0.52
NPIPA1-208	ENST00000545831	KLF18	A0A0U1RQI7	1052 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	MPHOSPH10	O00566	681 aa	Known RBP	11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SHMT1	P34896	483 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	EVC	P57679	992 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CUL4A	Q13619	759 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SEC23A	Q15436	765 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	ME3	Q16798	604 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	DCAF15	Q66K64	600 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	TATDN1	Q6P1N9	297 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SGMS1	Q86VZ5	419 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SULF1	Q8IWU6	871 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	NKX2-3	Q8TAU0	364 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	TAF1D	Q9H5J8	278 aa	Predicted RBP	11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	LY9	Q9HBG7	655 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CABP5	Q9NP86	173 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	GPHN	Q9NQX3	736 aa	Predicted RBP	11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SLC12A7	Q9Y666	1083 aa		11.77	□□□□□ -0.53
NPIPA1-208	ENST00000545831	FAM196B	A6NMK8	535 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	AKR1B1	P15121	316 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	VEGFA	P15692	232 aa	Predicted RBP	11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	PDIA3	P30101	505 aa	Known RBP	11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	STK3	Q13188	491 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	ABCB5	Q2M3G0	1257 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SUPT20HL1	Q3ZLR7	823 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	EAPP	Q56P03	285 aa	Predicted RBP	11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CATIP	Q7Z7H3	387 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	ENAH	Q8N8S7	591 aa	Predicted RBP	11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SPRYD3	Q8NCJ5	442 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	INTS4	Q96HW7	963 aa	Known RBP	11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	TEPSIN	Q96N21	525 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	DNAJC18	Q9H819	358 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	KAT14	Q9H8E8	782 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	PGAP2	Q9UHJ9	254 aa		11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	SCAF8	Q9UPN6	1271 aa	Known RBP	11.76	□□□□□ -0.53
NPIPA1-208	ENST00000545831	GOLGA8B	A8MQT2	603 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	ZBTB43	O43298	467 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	DHX16	O60231	1041 aa	Known RBP	11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	PFKFB2	O60825	505 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	LARGE1	O95461	756 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CALM1	P0DP23	149 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CALM2	P0DP24	149 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CALM3	P0DP25	149 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	MAP3K10	Q02779	954 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	APOA5	Q6Q788	366 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	TMEM179	Q6ZVK1	233 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	MIGA2	Q7L4E1	593 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CCDC83	Q8IWF9	413 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	ANKS1A	Q92625	1134 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CWC22	Q9HCG8	908 aa	Known RBP	11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	BRPF3	Q9ULD4	1205 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	STX8	Q9UNK0	236 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	PLIN4	Q96Q06	1357 aa		11.75	□□□□□ -0.53
NPIPA1-208	ENST00000545831	GOLGA8A	A7E2F4	631 aa		11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	POTEC	B2RU33	542 aa		11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	NMT2	O60551	498 aa		11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	DDAH1	O94760	285 aa		11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	TOP1	P11387	765 aa	Known RBP	11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	METAP2	P50579	478 aa	Known RBP eCLIP	11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	RCAN1	P53805	252 aa		11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CCT2	P78371	535 aa	Known RBP	11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	PPP2R5B	Q15173	497 aa		11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	NBPF12	Q5TAG4	269 aa	Predicted RBP	11.74	□□□□□ -0.53
NPIPA1-208	ENST00000545831	CPLX2	Q6PUV4	134 aa	Known RBP	11.74	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms