RNA–Protein interactions for RNA: ENST00000544996.1

CCDC78-216, Transcript of coiled-coil domain containing 78, humanhuman

TSL 4

Gene CCDC78, Length 551 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-216ENST00000544996 GPAT2Q6NUI2 795 aa18.9■□□□□ 0.62
CCDC78-216ENST00000544996 CHD1LQ86WJ1 897 aa18.9■□□□□ 0.62
CCDC78-216ENST00000544996 TAOK2Q9UL54 1235 aa18.9■□□□□ 0.62
CCDC78-216ENST00000544996 ZBTB21Q9ULJ3 1066 aa18.9■□□□□ 0.62
CCDC78-216ENST00000544996 DOCK1Q14185 1865 aa18.89■□□□□ 0.61
CCDC78-216ENST00000544996 NUCB1Q02818 461 aa18.89■□□□□ 0.61
CCDC78-216ENST00000544996 STRBPQ96SI9 672 aaKnown RBP18.89■□□□□ 0.61
CCDC78-216ENST00000544996 WDR18Q9BV38 432 aa18.89■□□□□ 0.61
CCDC78-216ENST00000544996 CABP5Q9NP86 173 aa18.89■□□□□ 0.61
CCDC78-216ENST00000544996 SLC45A1Q9Y2W3 748 aa18.89■□□□□ 0.61
CCDC78-216ENST00000544996 CDK5RAP2Q96SN8 1893 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 GH2P01242 217 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 KIF22Q14807 665 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 ABCB5Q2M3G0 1257 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 PROCA1Q8NCQ7 364 aaPredicted RBP18.88■□□□□ 0.61
CCDC78-216ENST00000544996 OSBP2Q969R2 916 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 EVI5LQ96CN4 794 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 SWAP70Q9UH65 585 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 AGTPBP1Q9UPW5 1226 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 TRIM17Q9Y577 477 aa18.88■□□□□ 0.61
CCDC78-216ENST00000544996 USP17L12C9JPN9 530 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 USP17L21D6R901 530 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 GNAT2P19087 354 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 SHMT1P34896 483 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 HMGCS2P54868 508 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 JAG1P78504 1218 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 GABPAQ06546 454 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 PABPC4Q13310 644 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC78-216ENST00000544996 CD99L2Q8TCZ2 262 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 TMOD4Q9NZQ9 345 aa18.87■□□□□ 0.61
CCDC78-216ENST00000544996 SIPA1L1O43166 1804 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 CCDC85CA6NKD9 419 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 C19orf81C9J6K1 198 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 USP17L10C9JJH3 530 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 GPAA1O43292 621 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 CYP2C8P10632 490 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 CYP2D6P10635 497 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 BACE1P56817 501 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 MTMR2Q13614 643 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 RAB3GAP1Q15042 981 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 SH3D19Q5HYK7 790 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 C12orf60Q5U649 245 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 GIMAP6Q6P9H5 292 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 C17orf99Q6UX52 265 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 SMCR8Q8TEV9 937 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-216ENST00000544996 EFCC1Q9HA90 598 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 CPA4Q9UI42 421 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 PNMA3Q9UL41 463 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 MYH1P12882 1939 aa18.86■□□□□ 0.61
CCDC78-216ENST00000544996 APPP05067 770 aa18.85■□□□□ 0.61
CCDC78-216ENST00000544996 SHROOM1Q2M3G4 852 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-216ENST00000544996 FBXO46Q6PJ61 603 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-216ENST00000544996 OTOP1Q7RTM1 612 aa18.85■□□□□ 0.61
CCDC78-216ENST00000544996 ARPP21Q9UBL0 812 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-216ENST00000544996 M0R2C6 588 aa18.84■□□□□ 0.61
CCDC78-216ENST00000544996 MPHOSPH10O00566 681 aaKnown RBP18.84■□□□□ 0.61
CCDC78-216ENST00000544996 ZMYM1Q5SVZ6 1142 aa18.84■□□□□ 0.61
CCDC78-216ENST00000544996 TREML2Q5T2D2 321 aa18.84■□□□□ 0.61
CCDC78-216ENST00000544996 CTR9Q6PD62 1173 aa18.84■□□□□ 0.61
CCDC78-216ENST00000544996 TICAM2Q86XR7 235 aa18.84■□□□□ 0.61
CCDC78-216ENST00000544996 DYNLL2Q96FJ2 89 aa18.84■□□□□ 0.61
CCDC78-216ENST00000544996 FEZ1Q99689 392 aa18.84■□□□□ 0.61
CCDC78-216ENST00000544996 ADGRA2Q96PE1 1338 aa18.83■□□□□ 0.61
CCDC78-216ENST00000544996 CYP2D7A0A087X1C5 515 aa18.83■□□□□ 0.6
CCDC78-216ENST00000544996 GSG1L2A8MUP6 293 aa18.83■□□□□ 0.6
CCDC78-216ENST00000544996 TRIM6-TRIM34B2RNG4 842 aa18.83■□□□□ 0.6
CCDC78-216ENST00000544996 OSBPP22059 807 aa18.83■□□□□ 0.6
CCDC78-216ENST00000544996 LACTBP83111 547 aaPredicted RBP18.83■□□□□ 0.6
CCDC78-216ENST00000544996 EVX2Q03828 476 aa18.83■□□□□ 0.6
CCDC78-216ENST00000544996 SEC62Q99442 399 aaKnown RBP18.83■□□□□ 0.6
CCDC78-216ENST00000544996 NACAP1Q9BZK3 213 aa18.83■□□□□ 0.6
CCDC78-216ENST00000544996 NAV1Q8NEY1 1877 aa18.83■□□□□ 0.6
CCDC78-216ENST00000544996 DDX60LQ5H9U9 1706 aaKnown RBP18.83■□□□□ 0.6
CCDC78-216ENST00000544996 PATL2C9JE40 543 aaKnown RBP18.82■□□□□ 0.6
CCDC78-216ENST00000544996 GNRH1P01148 92 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 TDO2P48775 406 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 CDK8P49336 464 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 SBK1Q52WX2 424 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 USP17L2Q6R6M4 530 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 TMEM179Q6ZVK1 233 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 C16orf86Q6ZW13 317 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 PLEKHM2Q8IWE5 1019 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 SLC44A5Q8NCS7 719 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 CCDC17Q96LX7 622 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 OSBPL3Q9H4L5 887 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 HPS5Q9UPZ3 1129 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 MYH7P12883 1935 aa18.82■□□□□ 0.6
CCDC78-216ENST00000544996 USP14P54578 494 aa18.81■□□□□ 0.6
CCDC78-216ENST00000544996 SEPT2Q15019 361 aa18.81■□□□□ 0.6
CCDC78-216ENST00000544996 PTPN22Q9Y2R2 807 aa18.81■□□□□ 0.6
CCDC78-216ENST00000544996 PHIPQ8WWQ0 1821 aa18.81■□□□□ 0.6
CCDC78-216ENST00000544996 ATAD5Q96QE3 1844 aa18.8■□□□□ 0.6
CCDC78-216ENST00000544996 MINDY4BA8MYZ0 360 aa18.8■□□□□ 0.6
CCDC78-216ENST00000544996 BCRP11274 1271 aa18.8■□□□□ 0.6
CCDC78-216ENST00000544996 GCLCP48506 637 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-216ENST00000544996 IRX3P78415 501 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-216ENST00000544996 RILPL2Q969X0 211 aa18.8■□□□□ 0.6
CCDC78-216ENST00000544996 KIAA1683Q9H0B3 1180 aa18.8■□□□□ 0.6
CCDC78-216ENST00000544996 ASCC2Q9H1I8 757 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-216ENST00000544996 HELLSQ9NRZ9 838 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms