RNA–Protein interactions for RNA: ENST00000544983.1

SNHG1-221, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-221ENST00000544983 CNNM2Q9H8M5 875 aa13.94□□□□□ -0.18
SNHG1-221ENST00000544983 RBM8AQ9Y5S9 174 aaKnown RBP13.94□□□□□ -0.18
SNHG1-221ENST00000544983 ZBTB48P10074 688 aaPredicted RBP13.93□□□□□ -0.18
SNHG1-221ENST00000544983 INPP5BP32019 993 aa13.93□□□□□ -0.18
SNHG1-221ENST00000544983 ABCB5Q2M3G0 1257 aa13.93□□□□□ -0.18
SNHG1-221ENST00000544983 MFSD6Q6ZSS7 791 aa13.93□□□□□ -0.18
SNHG1-221ENST00000544983 TMEM179Q6ZVK1 233 aa13.93□□□□□ -0.18
SNHG1-221ENST00000544983 MOB2Q70IA6 237 aa13.93□□□□□ -0.18
SNHG1-221ENST00000544983 ZKSCAN4Q969J2 545 aaPredicted RBP13.93□□□□□ -0.18
SNHG1-221ENST00000544983 DYNLL2Q96FJ2 89 aa13.93□□□□□ -0.18
SNHG1-221ENST00000544983 SPDYE5A6NIY4 337 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 FAM196BA6NMK8 535 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 USP17L5A8MUK1 530 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 ZKSCAN1P17029 563 aaPredicted RBP13.92□□□□□ -0.18
SNHG1-221ENST00000544983 ZNF157P51786 506 aaPredicted RBP13.92□□□□□ -0.18
SNHG1-221ENST00000544983 PPATQ06203 517 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 TRDNQ13061 729 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 NECTIN1Q15223 517 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 KRT23Q9C075 422 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 AS3MTQ9HBK9 375 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.92□□□□□ -0.18
SNHG1-221ENST00000544983 SNCAIPQ9Y6H5 919 aa13.92□□□□□ -0.18
SNHG1-221ENST00000544983 PTPRAP18433 802 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 RASA1P20936 1047 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 MCCP23508 829 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 HAND2P61296 217 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 CTDSPL2Q05D32 466 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 KRT32Q14532 448 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 TSGA10IPQ3SY00 556 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 CCDC178Q5BJE1 867 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 REM2Q8IYK8 340 aaPredicted RBP13.91□□□□□ -0.18
SNHG1-221ENST00000544983 SLC44A5Q8NCS7 719 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 ESR2Q92731 530 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 KANSL2Q9H9L4 492 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 ZBTB21Q9ULJ3 1066 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 FZD1Q9UP38 647 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 LAMA4Q16363 1823 aa13.91□□□□□ -0.18
SNHG1-221ENST00000544983 MYH8P13535 1937 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 MPHOSPH10O00566 681 aaKnown RBP13.9□□□□□ -0.18
SNHG1-221ENST00000544983 CXCL11O14625 94 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 GH2P01242 217 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 CYP21A2P08686 494 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 SLC10A3P09131 477 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 TSPY3P0CV98 308 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 TSPY8P0CW00 308 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 INHBEP58166 350 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 HTRA3P83110 453 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 NOGQ13253 232 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 PPIL2Q13356 520 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 SPRYD7Q5W111 196 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 CREB3L3Q68CJ9 461 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 NEDD1Q8NHV4 660 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 OPTNQ96CV9 577 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 CLMNQ96JQ2 1002 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 WDR18Q9BV38 432 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 USP26Q9BXU7 913 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 ELP3Q9H9T3 547 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 SYNPO2Q9UMS6 1093 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 PLIN4Q96Q06 1357 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 DOCK1Q14185 1865 aa13.9□□□□□ -0.18
SNHG1-221ENST00000544983 OTOFQ9HC10 1997 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 TSPY2A6NKD2 308 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 SLC27A2O14975 620 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 GDF11O95390 407 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 HSPA4P34932 840 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 MAP2K2P36507 400 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 EVX2Q03828 476 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 RRP1BQ14684 758 aaKnown RBP13.89□□□□□ -0.19
SNHG1-221ENST00000544983 C8orf34Q49A92 452 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 RASAL3Q86YV0 1011 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 TBC1D10CQ8IV04 446 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 ZNF280CQ8ND82 737 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 KCNB2Q92953 911 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 WNK4Q96J92 1243 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 NBPF3Q9H094 633 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 SH2D4AQ9H788 454 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 TCP11L1Q9NUJ3 509 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 ZHX2Q9Y6X8 837 aa13.89□□□□□ -0.19
SNHG1-221ENST00000544983 C19orf81C9J6K1 198 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 SMIM22K7EJ46 135 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 RANBP6O60518 1105 aaKnown RBP13.88□□□□□ -0.19
SNHG1-221ENST00000544983 PRDM1O75626 825 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 SLURP2P0DP57 97 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 AKR1B1P15121 316 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 GTF2A2P52657 109 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 TFAP4Q01664 338 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 SNAPC2Q13487 334 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 RAB3GAP1Q15042 981 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 PAXIP1Q6ZW49 1069 aaPredicted RBP13.88□□□□□ -0.19
SNHG1-221ENST00000544983 RALYLQ86SE5 291 aaKnown RBP13.88□□□□□ -0.19
SNHG1-221ENST00000544983 IQCA1Q86XH1 822 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 NCOA7Q8NI08 942 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 OTUD5Q96G74 571 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 CAPNS2Q96L46 248 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 MTA3Q9BTC8 594 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 ARHGEF10LQ9HCE6 1279 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 KCNH4Q9UQ05 1017 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 AFG3L2Q9Y4W6 797 aa13.88□□□□□ -0.19
SNHG1-221ENST00000544983 MANSC4A6NHS7 340 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms