RNA–Protein interactions for RNA: ENST00000544913.2

HMGCS2-204, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

TSL 2 BASIC

Gene HMGCS2, Length 1,925 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-204ENST00000544913 HDAC9Q9UKV0 1011 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 SCAF8Q9UPN6 1271 aaKnown RBP8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 LIMCH1Q9UPQ0 1083 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 SSC5DA1L4H1 1573 aa8.24□□□□□ -1.09
HMGCS2-204ENST00000544913 ZC3H4Q9UPT8 1303 aaKnown RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 IGKV6D-41A0A0C4DH26 115 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 FSD2A1L4K1 749 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 FAM196BA6NMK8 535 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 CDK8P49336 464 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 APOBRQ0VD83 1088 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 TCP10Q12799 353 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 SGMS1Q86VZ5 419 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 ENAHQ8N8S7 591 aaPredicted RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 KRT23Q9C075 422 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 RNF41Q9H4P4 317 aaPredicted RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 NID2Q14112 1375 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 TCP10L2B9ZVM9 353 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 GRIN3BO60391 1043 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 BAG4O95429 457 aaKnown RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 POLR3DP05423 398 aaPredicted RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 PDIA3P30101 505 aaKnown RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 KLHL40Q2TBA0 621 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 KIF4BQ2VIQ3 1234 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 FAM47AQ5JRC9 791 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 RALYLQ86SE5 291 aaKnown RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 FAM83AQ86UY5 434 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 NECAB1Q8N987 351 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 FAM151AQ8WW52 585 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 ZKSCAN3Q9BRR0 538 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 MTA3Q9BTC8 594 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 TMEM39BQ9GZU3 492 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 FAM217BQ9NTX9 383 aaPredicted RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 SERPINB13Q9UIV8 391 aa8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 ANGEL1Q9UNK9 670 aaKnown RBP8.23□□□□□ -1.09
HMGCS2-204ENST00000544913 WDR90Q96KV7 1748 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 TNKSO95271 1327 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 DCAF8L1A6NGE4 600 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 PFKFB2O60825 505 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 CTDNEP1O95476 244 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 AKR1B1P15121 316 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 LIFRP42702 1097 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 MAP3K10Q02779 954 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 RRP12Q5JTH9 1297 aaKnown RBP8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 TATDN1Q6P1N9 297 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 ESR2Q92731 530 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 GTF3C6Q969F1 213 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 TMEM87BQ96K49 555 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 PAPPA2Q9BXP8 1791 aa8.22□□□□□ -1.09
HMGCS2-204ENST00000544913 GUCY1A2P33402 732 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 SCRN1Q12765 414 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 TRDNQ13061 729 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 RBM26Q5T8P6 1007 aaKnown RBP8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 APOA5Q6Q788 366 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 TTC6Q86TZ1 520 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 CLEC10AQ8IUN9 316 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 NEDD1Q8NHV4 660 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 ANKS1AQ92625 1134 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 ZSCAN31Q96LW9 406 aaPredicted RBP8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 ZSCAN10Q96SZ4 725 aaPredicted RBP8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 DHX36Q9H2U1 1008 aaKnown RBP8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 SH2B1Q9NRF2 756 aaPredicted RBP8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 HACL1Q9UJ83 578 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 MYH8P13535 1937 aa8.21□□□□□ -1.09
HMGCS2-204ENST00000544913 KLF18A0A0U1RQI7 1052 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 GLTPD2A6NH11 291 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 RANBP6O60518 1105 aaKnown RBP8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 TFAP4Q01664 338 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 PDE4BQ07343 736 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 RASA3Q14644 834 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 ANKRD1Q15327 319 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 TMEM67Q5HYA8 995 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 SIAH1Q8IUQ4 282 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 ZNF274Q96GC6 653 aaPredicted RBP8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 NCOA5Q9HCD5 579 aaKnown RBP8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 TCP11L1Q9NUJ3 509 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 PI4KBQ9UBF8 816 aa8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.21□□□□□ -1.1
HMGCS2-204ENST00000544913 SCN4AP35499 1836 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 POLR2AP24928 1970 aaKnown RBP8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 PHF20L1A8MW92 1017 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 IFIT3O14879 490 aaKnown RBP8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 CDC27P30260 824 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 NT5C2P49902 561 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 TROAPQ12815 778 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 PKP1Q13835 747 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 SLC35G1Q2M3R5 365 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 DLK2Q6UY11 383 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 RASGRP2Q7LDG7 609 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 RAB11FIP4Q86YS3 637 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 CCDC83Q8IWF9 413 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 CSRNP1Q96S65 589 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 MYL10Q9BUA6 226 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 VEZTQ9HBM0 779 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 TOMM22Q9NS69 142 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 FOXD4L1Q9NU39 408 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 GGA3Q9NZ52 723 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 TAOK2Q9UL54 1235 aa8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 DDX49Q9Y6V7 483 aaKnown RBP8.2□□□□□ -1.1
HMGCS2-204ENST00000544913 H7C1D1 291 aa8.19□□□□□ -1.1
HMGCS2-204ENST00000544913 JAK2O60674 1132 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms