RNA–Protein interactions for RNA: ENST00000544004.1

AP000439.1-201, humanhuman

TSL 4 BASIC

Gene AP000439.1, Length 581 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000439.1-201ENST00000544004 PAGR1Q9BTK6 254 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 WDR18Q9BV38 432 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 DDX20Q9UHI6 824 aaKnown RBP14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 ATP11BQ9Y2G3 1177 aa14.04□□□□□ -0.16
AP000439.1-201ENST00000544004 DNM1LO00429 736 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 CNGA1P29973 690 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 ADORA1P30542 326 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 MECOMQ03112 1051 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 MAP2K5Q13163 448 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 RASGRF1Q13972 1273 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 MFSD14CQ5VZR4 134 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 SPTY2D1Q68D10 685 aaPredicted RBP14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 LPAR1Q92633 364 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 BADQ92934 168 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 EDC3Q96F86 508 aaKnown RBP14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 CWC22Q9HCG8 908 aaKnown RBP14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 PRDM5Q9NQX1 630 aaPredicted RBP14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 FLRT1Q9NZU1 646 aa14.03□□□□□ -0.16
AP000439.1-201ENST00000544004 ZBTB22O15209 634 aa14.02□□□□□ -0.17
AP000439.1-201ENST00000544004 MSCO60682 206 aa14.02□□□□□ -0.17
AP000439.1-201ENST00000544004 CIAO1O76071 339 aa14.02□□□□□ -0.17
AP000439.1-201ENST00000544004 ERICH6Q7L0X2 663 aa14.02□□□□□ -0.17
AP000439.1-201ENST00000544004 HERC5Q9UII4 1024 aaKnown RBP14.02□□□□□ -0.17
AP000439.1-201ENST00000544004 FBXO3Q9UK99 471 aa14.02□□□□□ -0.17
AP000439.1-201ENST00000544004 SIPA1L1O43166 1804 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 TTC28Q96AY4 2481 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 PDS5AQ29RF7 1337 aaKnown RBP14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 C19orf81C9J6K1 198 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 ASNSP08243 561 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 POTEEQ6S8J3 1075 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 USP38Q8NB14 1042 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 ZNF384Q8TF68 577 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 NDUFB9Q9Y6M9 179 aa14.01□□□□□ -0.17
AP000439.1-201ENST00000544004 USP17L10C9JJH3 530 aa14□□□□□ -0.17
AP000439.1-201ENST00000544004 MAP4K4O95819 1239 aaPredicted RBP14□□□□□ -0.17
AP000439.1-201ENST00000544004 JAG1P78504 1218 aa14□□□□□ -0.17
AP000439.1-201ENST00000544004 GJC2Q5T442 439 aaPredicted RBP14□□□□□ -0.17
AP000439.1-201ENST00000544004 SLC39A5Q6ZMH5 540 aa14□□□□□ -0.17
AP000439.1-201ENST00000544004 GTF3C2Q8WUA4 911 aaPredicted RBP14□□□□□ -0.17
AP000439.1-201ENST00000544004 TMEM265A0A087WTH1 108 aa13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 GLRX3O76003 335 aaKnown RBP13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 LDHCP07864 332 aa13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 CYP2C19P33261 490 aa13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 IL15P40933 162 aaPredicted RBP13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 TIMM10P62072 90 aa13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 ATP2B2Q01814 1243 aa13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 WDR78Q5VTH9 848 aa13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 MRPL50Q8N5N7 158 aaKnown RBP13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 PI4KBQ9UBF8 816 aa13.99□□□□□ -0.17
AP000439.1-201ENST00000544004 PTPRCP08575 1304 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 PTPREP23469 700 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 PLA2G5P39877 138 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 CCNA1P78396 465 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 GSTO1P78417 241 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 GRIN2CQ14957 1233 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 SHROOM1Q2M3G4 852 aaPredicted RBP13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 TRIM60Q495X7 471 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 SH3RF1Q7Z6J0 888 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 TEX11Q8IYF3 940 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 ARRDC4Q8NCT1 418 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 TRPV1Q8NER1 839 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 NPLOC4Q8TAT6 608 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 NSUN4Q96CB9 384 aaKnown RBP13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 PDLIM7Q9NR12 457 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 EMILIN3Q9NT22 766 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 PA2G4Q9UQ80 394 aaKnown RBP13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 RABGAP1Q9Y3P9 1069 aa13.98□□□□□ -0.17
AP000439.1-201ENST00000544004 TRIM43BA6NCK2 446 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 SLC15A5A6NIM6 579 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 CNMDO75829 334 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 GDF11O95390 407 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 HOXC6P09630 235 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 SNX17Q15036 470 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 ANO1Q5XXA6 986 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 TRIM43Q96BQ3 446 aaPredicted RBP13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 FAM122AQ96E09 287 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 RNPC3Q96LT9 517 aaKnown RBP13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 DNAJC18Q9H819 358 aa13.97□□□□□ -0.17
AP000439.1-201ENST00000544004 CDK5RAP2Q96SN8 1893 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 KBTBD13C9JR72 458 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 MYCNP04198 464 aaPredicted RBP13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 CYBAP13498 195 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 USP17L2Q6R6M4 530 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 TBC1D9Q6ZT07 1266 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 CRACR2BQ8N4Y2 399 aaPredicted RBP13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 SH3RF3Q8TEJ3 882 aaPredicted RBP13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 XAGE2Q96GT9 111 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 DHX36Q9H2U1 1008 aaKnown RBP13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 ZBTB21Q9ULJ3 1066 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 IVNS1ABPQ9Y6Y0 642 aa13.96□□□□□ -0.17
AP000439.1-201ENST00000544004 A0A1B0GUL7 405 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 ITGB8P26012 769 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 GRB14Q14449 540 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 FOXP4Q8IVH2 680 aaPredicted RBP13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 FERMT2Q96AC1 680 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 TRIM34Q9BYJ4 488 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 GINM1Q9NU53 330 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 RAI14Q9P0K7 980 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 HMG20BQ9P0W2 317 aa13.95□□□□□ -0.18
AP000439.1-201ENST00000544004 USP17L15C9J2P7 530 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms