RNA–Protein interactions for RNA: ENST00000543814.5

PAAF1-213, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 5

Gene PAAF1, Length 882 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-213ENST00000543814 USP44Q9H0E7 712 aa21.05■□□□□ 0.96
PAAF1-213ENST00000543814 ATP11BQ9Y2G3 1177 aa21.05■□□□□ 0.96
PAAF1-213ENST00000543814 TTC28Q96AY4 2481 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 MUC3AQ02505 3323 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 MSCO60682 206 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 MFSD14CQ5VZR4 134 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 CCDC102BQ68D86 513 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 USP38Q8NB14 1042 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 BADQ92934 168 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 EDC3Q96F86 508 aaKnown RBP21.04■□□□□ 0.96
PAAF1-213ENST00000543814 FLRT1Q9NZU1 646 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 CEP126Q9P2H0 1117 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 FBXO3Q9UK99 471 aa21.04■□□□□ 0.96
PAAF1-213ENST00000543814 PDS5AQ29RF7 1337 aaKnown RBP21.04■□□□□ 0.96
PAAF1-213ENST00000543814 CDH23Q9H251 3354 aa21.03■□□□□ 0.96
PAAF1-213ENST00000543814 C19orf81C9J6K1 198 aa21.03■□□□□ 0.96
PAAF1-213ENST00000543814 MECOMQ03112 1051 aa21.03■□□□□ 0.96
PAAF1-213ENST00000543814 SPTY2D1Q68D10 685 aaPredicted RBP21.03■□□□□ 0.96
PAAF1-213ENST00000543814 ZNF384Q8TF68 577 aa21.03■□□□□ 0.96
PAAF1-213ENST00000543814 GTF3C2Q8WUA4 911 aaPredicted RBP21.03■□□□□ 0.96
PAAF1-213ENST00000543814 HERC5Q9UII4 1024 aaKnown RBP21.03■□□□□ 0.96
PAAF1-213ENST00000543814 CIAO1O76071 339 aa21.02■□□□□ 0.96
PAAF1-213ENST00000543814 MAP4K4O95819 1239 aaPredicted RBP21.02■□□□□ 0.96
PAAF1-213ENST00000543814 RASGRF1Q13972 1273 aa21.02■□□□□ 0.96
PAAF1-213ENST00000543814 CCDC184Q52MB2 194 aa21.02■□□□□ 0.96
PAAF1-213ENST00000543814 SLC39A5Q6ZMH5 540 aa21.02■□□□□ 0.96
PAAF1-213ENST00000543814 PAGR1Q9BTK6 254 aa21.02■□□□□ 0.96
PAAF1-213ENST00000543814 CNGA1P29973 690 aa21.01■□□□□ 0.95
PAAF1-213ENST00000543814 ADORA1P30542 326 aa21.01■□□□□ 0.95
PAAF1-213ENST00000543814 JAG1P78504 1218 aa21.01■□□□□ 0.95
PAAF1-213ENST00000543814 SIL1Q9H173 461 aa21.01■□□□□ 0.95
PAAF1-213ENST00000543814 PRDM5Q9NQX1 630 aaPredicted RBP21.01■□□□□ 0.95
PAAF1-213ENST00000543814 RLFQ13129 1914 aa21■□□□□ 0.95
PAAF1-213ENST00000543814 ASNSP08243 561 aa21■□□□□ 0.95
PAAF1-213ENST00000543814 FAM122AQ96E09 287 aa21■□□□□ 0.95
PAAF1-213ENST00000543814 SALL2Q9Y467 1007 aaPredicted RBP21■□□□□ 0.95
PAAF1-213ENST00000543814 USP17L10C9JJH3 530 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 GLRX3O76003 335 aaKnown RBP20.99■□□□□ 0.95
PAAF1-213ENST00000543814 HOXC6P09630 235 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 GRIN2CQ14957 1233 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 SNX17Q15036 470 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 GJC2Q5T442 439 aaPredicted RBP20.99■□□□□ 0.95
PAAF1-213ENST00000543814 ERICH6Q7L0X2 663 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 ARRDC4Q8NCT1 418 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 TRPV1Q8NER1 839 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 CWC22Q9HCG8 908 aaKnown RBP20.99■□□□□ 0.95
PAAF1-213ENST00000543814 PDLIM7Q9NR12 457 aa20.99■□□□□ 0.95
PAAF1-213ENST00000543814 TRIM43BA6NCK2 446 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 SLC15A5A6NIM6 579 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 IGHA2P01877 340 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 PTPREP23469 700 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 ATP2B2Q01814 1243 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 TRIM60Q495X7 471 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 SH3RF1Q7Z6J0 888 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 TRIM43Q96BQ3 446 aaPredicted RBP20.98■□□□□ 0.95
PAAF1-213ENST00000543814 EMILIN3Q9NT22 766 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 PI4KBQ9UBF8 816 aa20.98■□□□□ 0.95
PAAF1-213ENST00000543814 CNMDO75829 334 aa20.97■□□□□ 0.95
PAAF1-213ENST00000543814 CYP2C19P33261 490 aa20.97■□□□□ 0.95
PAAF1-213ENST00000543814 IL15P40933 162 aaPredicted RBP20.97■□□□□ 0.95
PAAF1-213ENST00000543814 RABGAP1Q9Y3P9 1069 aa20.97■□□□□ 0.95
PAAF1-213ENST00000543814 NDUFB9Q9Y6M9 179 aa20.97■□□□□ 0.95
PAAF1-213ENST00000543814 LDHCP07864 332 aa20.96■□□□□ 0.95
PAAF1-213ENST00000543814 CYBAP13498 195 aa20.96■□□□□ 0.95
PAAF1-213ENST00000543814 CCNA1P78396 465 aa20.96■□□□□ 0.95
PAAF1-213ENST00000543814 MRPL50Q8N5N7 158 aaKnown RBP20.96■□□□□ 0.95
PAAF1-213ENST00000543814 ATXN2LQ8WWM7 1075 aaKnown RBP20.96■□□□□ 0.95
PAAF1-213ENST00000543814 RNPC3Q96LT9 517 aaKnown RBP20.96■□□□□ 0.95
PAAF1-213ENST00000543814 SIPA1L1O43166 1804 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 KBTBD13C9JR72 458 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 GSTO1P78417 241 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 SHROOM1Q2M3G4 852 aaPredicted RBP20.95■□□□□ 0.94
PAAF1-213ENST00000543814 C1orf53Q5VUE5 145 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 NPLOC4Q8TAT6 608 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 NSUN4Q96CB9 384 aaKnown RBP20.95■□□□□ 0.94
PAAF1-213ENST00000543814 DHX36Q9H2U1 1008 aaKnown RBP20.95■□□□□ 0.94
PAAF1-213ENST00000543814 DNAJC18Q9H819 358 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 GINM1Q9NU53 330 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 PTPRCP08575 1304 aa20.95■□□□□ 0.94
PAAF1-213ENST00000543814 HOXD11P31277 338 aaPredicted RBP20.94■□□□□ 0.94
PAAF1-213ENST00000543814 EPHB4P54760 987 aa20.94■□□□□ 0.94
PAAF1-213ENST00000543814 TIMM10P62072 90 aa20.94■□□□□ 0.94
PAAF1-213ENST00000543814 GRB14Q14449 540 aa20.94■□□□□ 0.94
PAAF1-213ENST00000543814 METTL16Q86W50 562 aaKnown RBP20.94■□□□□ 0.94
PAAF1-213ENST00000543814 TEX11Q8IYF3 940 aa20.94■□□□□ 0.94
PAAF1-213ENST00000543814 ITGB8P26012 769 aa20.93■□□□□ 0.94
PAAF1-213ENST00000543814 MAP3K12Q12852 859 aa20.93■□□□□ 0.94
PAAF1-213ENST00000543814 WDR78Q5VTH9 848 aa20.93■□□□□ 0.94
PAAF1-213ENST00000543814 USP17L2Q6R6M4 530 aa20.93■□□□□ 0.94
PAAF1-213ENST00000543814 ASB2Q96Q27 587 aa20.93■□□□□ 0.94
PAAF1-213ENST00000543814 DNAJB2P25686 324 aa20.92■□□□□ 0.94
PAAF1-213ENST00000543814 ADCYAP1R1P41586 468 aa20.92■□□□□ 0.94
PAAF1-213ENST00000543814 FOXP4Q8IVH2 680 aaPredicted RBP20.92■□□□□ 0.94
PAAF1-213ENST00000543814 ADAMTS19Q8TE59 1207 aa20.92■□□□□ 0.94
PAAF1-213ENST00000543814 ZNF576Q9H609 170 aa20.92■□□□□ 0.94
PAAF1-213ENST00000543814 ZBTB21Q9ULJ3 1066 aa20.92■□□□□ 0.94
PAAF1-213ENST00000543814 IVNS1ABPQ9Y6Y0 642 aa20.92■□□□□ 0.94
PAAF1-213ENST00000543814 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.91■□□□□ 0.94
PAAF1-213ENST00000543814 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.91■□□□□ 0.94
PAAF1-213ENST00000543814 USP17L15C9J2P7 530 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 270.7 ms