RNA–Protein interactions for RNA: ENST00000542876.1

PPP1CA-210, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 3

Gene PPP1CA, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-210ENST00000542876 HMGCRP04035 888 aa21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 HOXA7P31268 230 aaPredicted RBP21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 DYNLL1P63167 89 aaKnown RBP21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 ERC1Q8IUD2 1116 aa21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 EAF2Q96CJ1 260 aaPredicted RBP21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 DNAJC18Q9H819 358 aa21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 MORF4L1Q9UBU8 362 aa21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 ZBTB21Q9ULJ3 1066 aa21.24■□□□□ 0.99
PPP1CA-210ENST00000542876 RLBP1P12271 317 aa21.23■□□□□ 0.99
PPP1CA-210ENST00000542876 USP5P45974 858 aa21.23■□□□□ 0.99
PPP1CA-210ENST00000542876 MAP3K12Q12852 859 aa21.23■□□□□ 0.99
PPP1CA-210ENST00000542876 CCAR1Q8IX12 1150 aaKnown RBP21.23■□□□□ 0.99
PPP1CA-210ENST00000542876 XRN2Q9H0D6 950 aaKnown RBP eCLIP21.23■□□□□ 0.99
PPP1CA-210ENST00000542876 MAST2Q6P0Q8 1798 aa21.23■□□□□ 0.99
PPP1CA-210ENST00000542876 EVI5O60447 810 aa21.22■□□□□ 0.99
PPP1CA-210ENST00000542876 MAGEB6Q8N7X4 407 aa21.22■□□□□ 0.99
PPP1CA-210ENST00000542876 MIGA1Q8NAN2 632 aa21.22■□□□□ 0.99
PPP1CA-210ENST00000542876 GPRC5AQ8NFJ5 357 aa21.22■□□□□ 0.99
PPP1CA-210ENST00000542876 P2RX7Q99572 595 aaKnown RBP21.22■□□□□ 0.99
PPP1CA-210ENST00000542876 HMX1Q9NP08 348 aaPredicted RBP21.22■□□□□ 0.99
PPP1CA-210ENST00000542876 LOC285556D6RIA3 1793 aa21.22■□□□□ 0.99
PPP1CA-210ENST00000542876 TRIOBPQ9H2D6 2365 aa21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 HERVK_113P62684 666 aa21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 JAG1P78504 1218 aa21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 CEP85Q6P2H3 762 aa21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 TMED8Q6PL24 325 aaPredicted RBP21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 AACSQ86V21 672 aa21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 GTF3C2Q8WUA4 911 aaPredicted RBP21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 CRISPLD2Q9H0B8 497 aa21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 RBM27Q9P2N5 1060 aaKnown RBP21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 GJD2Q9UKL4 321 aa21.21■□□□□ 0.99
PPP1CA-210ENST00000542876 PDE3AQ14432 1141 aa21.2■□□□□ 0.98
PPP1CA-210ENST00000542876 HSP90AB4PQ58FF6 505 aa21.2■□□□□ 0.98
PPP1CA-210ENST00000542876 USP17L2Q6R6M4 530 aa21.2■□□□□ 0.98
PPP1CA-210ENST00000542876 NECAB2Q7Z6G3 386 aa21.2■□□□□ 0.98
PPP1CA-210ENST00000542876 TTC6Q86TZ1 520 aa21.2■□□□□ 0.98
PPP1CA-210ENST00000542876 NUDT12Q9BQG2 462 aa21.2■□□□□ 0.98
PPP1CA-210ENST00000542876 RPTORQ8N122 1335 aa21.2■□□□□ 0.98
PPP1CA-210ENST00000542876 GH2P01242 217 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 CYP2B6P20813 491 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 MAPK4P31152 587 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 SHROOM1Q2M3G4 852 aaPredicted RBP21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 ANKLE1Q8NAG6 615 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 SOCS4Q8WXH5 440 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 PAWRQ96IZ0 340 aaKnown RBP21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 FEZ1Q99689 392 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 SERPINB13Q9UIV8 391 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 EXOC6BQ9Y2D4 811 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 ATAD5Q96QE3 1844 aa21.19■□□□□ 0.98
PPP1CA-210ENST00000542876 CWC22Q9HCG8 908 aaKnown RBP21.18■□□□□ 0.98
PPP1CA-210ENST00000542876 MS4A1P11836 297 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 TTF1Q15361 905 aaPredicted RBP21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 TRMT44Q8IYL2 757 aaKnown RBP21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 PAGR1Q9BTK6 254 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 EHD4Q9H223 541 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 ANTXR1Q9H6X2 564 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 TXNRD2Q9NNW7 524 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 EMILIN3Q9NT22 766 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 RBPJLQ9UBG7 517 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 NDUFB9Q9Y6M9 179 aa21.17■□□□□ 0.98
PPP1CA-210ENST00000542876 XRCC5P13010 732 aaKnown RBP21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 USP14P54578 494 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 ERVK-9P63128 1117 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 ERVK-24P63145 666 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 RAB3GAP1Q15042 981 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 CERKLQ49MI3 558 aaPredicted RBP21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 TATDN1Q6P1N9 297 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 MIER1Q8N108 512 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 TRIB2Q92519 343 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 CABP5Q9NP86 173 aa21.16■□□□□ 0.98
PPP1CA-210ENST00000542876 SIPA1L1O43166 1804 aa21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 PEX10O60683 326 aa21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 TRIM32Q13049 653 aa21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 ZYXQ15942 572 aaKnown RBP21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 ABCB5Q2M3G0 1257 aa21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 PANK1Q8TE04 598 aa21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 NBPF3Q9H094 633 aa21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 IL1RAPL2Q9NP60 686 aa21.15■□□□□ 0.98
PPP1CA-210ENST00000542876 MAGEB6P1A0A0J9YX57 407 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L15C9J2P7 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L13C9JLJ4 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L11C9JVI0 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L18D6R9N7 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L22D6RA61 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L17D6RBQ6 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L19D6RCP7 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L20D6RJB6 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 POLR3DP05423 398 aaPredicted RBP21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 PRKAR2AP13861 404 aaKnown RBP21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 ZKSCAN1P17029 563 aaPredicted RBP21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 RGS2P41220 211 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 CCNA1P78396 465 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 USP17L24Q0WX57 530 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 CLASRPQ8N2M8 674 aaKnown RBP21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 RHPN1Q8TCX5 695 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 DIS3LQ8TF46 1054 aaKnown RBP21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 C12orf42Q96LP6 360 aa21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 RANBP2P49792 3224 aaKnown RBP21.14■□□□□ 0.97
PPP1CA-210ENST00000542876 ZBED9Q6R2W3 1325 aa21.13■□□□□ 0.97
PPP1CA-210ENST00000542876 DOCK3Q8IZD9 2030 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms