RNA–Protein interactions for RNA: ENST00000542555.1

CLPB-211, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 2

Gene CLPB, Length 421 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-211ENST00000542555 SH3TC1Q8TE82 1336 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 HCLS1P14317 486 aaPredicted RBP10.42□□□□□ -0.74
CLPB-211ENST00000542555 NF2P35240 595 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 EIF4A1P60842 406 aaKnown RBP10.42□□□□□ -0.74
CLPB-211ENST00000542555 CDCA5Q96FF9 252 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 DBNDD1Q9H9R9 158 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 GGA3Q9NZ52 723 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 AKAP11Q9UKA4 1901 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 NUP98P52948 1817 aa10.42□□□□□ -0.74
CLPB-211ENST00000542555 SHTN1A0MZ66 631 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 YDJCA8MPS7 323 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 ECE2O60344 883 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 TBC1D8O95759 1140 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 IL2RAP01589 272 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 EIF2S2P20042 333 aaKnown RBP10.41□□□□□ -0.74
CLPB-211ENST00000542555 FGFR3P22607 806 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 SREBF2Q12772 1141 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 NR1H3Q13133 447 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 RASAL3Q86YV0 1011 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 ZNF296Q8WUU4 475 aaPredicted RBP10.41□□□□□ -0.74
CLPB-211ENST00000542555 ABHD17AQ96GS6 310 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 LAMB4A4D0S4 1761 aa10.41□□□□□ -0.74
CLPB-211ENST00000542555 FKTNO75072 461 aa10.4□□□□□ -0.74
CLPB-211ENST00000542555 HSP90B1P14625 803 aaKnown RBP10.4□□□□□ -0.74
CLPB-211ENST00000542555 AIMP1Q12904 312 aaKnown RBP10.4□□□□□ -0.74
CLPB-211ENST00000542555 TCIRG1Q13488 830 aa10.4□□□□□ -0.74
CLPB-211ENST00000542555 HABP4Q5JVS0 413 aaKnown RBP10.4□□□□□ -0.74
CLPB-211ENST00000542555 INTS3Q68E01 1043 aaKnown RBP10.4□□□□□ -0.74
CLPB-211ENST00000542555 DLK2Q6UY11 383 aa10.4□□□□□ -0.74
CLPB-211ENST00000542555 CD163Q86VB7 1156 aa10.4□□□□□ -0.74
CLPB-211ENST00000542555 BTBD6Q96KE9 485 aa10.4□□□□□ -0.74
CLPB-211ENST00000542555 PCMTD1Q96MG8 357 aaPredicted RBP10.4□□□□□ -0.74
CLPB-211ENST00000542555 MAPK8IP3Q9UPT6 1336 aa10.39□□□□□ -0.75
CLPB-211ENST00000542555 MSX1P28360 303 aa10.39□□□□□ -0.75
CLPB-211ENST00000542555 NOM1Q5C9Z4 860 aaKnown RBP10.39□□□□□ -0.75
CLPB-211ENST00000542555 ANGEL2Q5VTE6 544 aaKnown RBP10.39□□□□□ -0.75
CLPB-211ENST00000542555 SLC51AQ86UW1 340 aa10.39□□□□□ -0.75
CLPB-211ENST00000542555 NLRP10Q86W26 655 aa10.39□□□□□ -0.75
CLPB-211ENST00000542555 SEMA6BQ9H3T3 888 aa10.39□□□□□ -0.75
CLPB-211ENST00000542555 TSPYL4Q9UJ04 414 aa10.39□□□□□ -0.75
CLPB-211ENST00000542555 C2CD2LO14523 706 aa10.38□□□□□ -0.75
CLPB-211ENST00000542555 EPXP11678 715 aa10.38□□□□□ -0.75
CLPB-211ENST00000542555 CTBSQ01459 385 aa10.38□□□□□ -0.75
CLPB-211ENST00000542555 UBAP2LQ14157 1087 aaKnown RBP10.38□□□□□ -0.75
CLPB-211ENST00000542555 C4orf17Q53FE4 359 aa10.38□□□□□ -0.75
CLPB-211ENST00000542555 AGBL3Q8NEM8 1001 aa10.38□□□□□ -0.75
CLPB-211ENST00000542555 THUMPD2Q9BTF0 503 aaKnown RBP10.38□□□□□ -0.75
CLPB-211ENST00000542555 ANKIB1Q9P2G1 1089 aa10.38□□□□□ -0.75
CLPB-211ENST00000542555 UBE2Q2LH0YL09 131 aa10.37□□□□□ -0.75
CLPB-211ENST00000542555 VIL1P09327 827 aaKnown RBP10.37□□□□□ -0.75
CLPB-211ENST00000542555 COPS6Q7L5N1 327 aa10.37□□□□□ -0.75
CLPB-211ENST00000542555 ARMC9Q7Z3E5 817 aa10.37□□□□□ -0.75
CLPB-211ENST00000542555 RNF135Q8IUD6 432 aa10.37□□□□□ -0.75
CLPB-211ENST00000542555 OGFOD1Q8N543 542 aa10.37□□□□□ -0.75
CLPB-211ENST00000542555 CCER1Q8TC90 406 aaPredicted RBP10.37□□□□□ -0.75
CLPB-211ENST00000542555 PITPNM2Q9BZ72 1349 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 NEURL1BA8MQ27 555 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 BNIP3LO60238 219 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 EGFRP00533 1210 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 ARAFP10398 606 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 HOXB4P17483 251 aaPredicted RBP10.36□□□□□ -0.75
CLPB-211ENST00000542555 CHRNA4P43681 627 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 TM4SF4P48230 202 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 INHBEP58166 350 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 GPSM2P81274 684 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 NFE2L2Q16236 605 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 FIGNL1Q6PIW4 674 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 XAGE2Q96GT9 111 aa10.36□□□□□ -0.75
CLPB-211ENST00000542555 UFL1O94874 794 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 PPP2R1AP30153 589 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 RPS8P62241 208 aaKnown RBP10.35□□□□□ -0.75
CLPB-211ENST00000542555 ARHGEF6Q15052 776 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 SF3B3Q15393 1217 aaKnown RBP10.35□□□□□ -0.75
CLPB-211ENST00000542555 TBC1D16Q8TBP0 767 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 XAGE3Q8WTP9 111 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 MYOZ2Q9NPC6 264 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 POLLQ9UGP5 575 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 TRIM17Q9Y577 477 aa10.35□□□□□ -0.75
CLPB-211ENST00000542555 DGKGP49619 791 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 ZNF280AP59817 542 aaPredicted RBP10.34□□□□□ -0.75
CLPB-211ENST00000542555 LMOD3Q0VAK6 560 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 DOC2BQ14184 412 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 ZMYM1Q5SVZ6 1142 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 OTUD7BQ6GQQ9 843 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 RHBDD1Q8TEB9 315 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 CELF1Q92879 486 aaKnown RBP10.34□□□□□ -0.75
CLPB-211ENST00000542555 ERO1AQ96HE7 468 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 KCNQ5Q9NR82 932 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 BABAM1Q9NWV8 329 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 ANKRD36CQ5JPF3 1778 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 PAPPA2Q9BXP8 1791 aa10.34□□□□□ -0.75
CLPB-211ENST00000542555 USP17L3A6NCW0 530 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 USP17L4A6NCW7 530 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 ANXA1P04083 346 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 USP17L1Q7RTZ2 530 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 PLBD2Q8NHP8 589 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 FAM89AQ96GI7 184 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 HRH3Q9Y5N1 445 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 RTL9Q8NET4 1388 aa10.33□□□□□ -0.76
CLPB-211ENST00000542555 DDX60Q8IY21 1712 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms