RNA–Protein interactions for RNA: ENST00000542310.1

VPS33A-206, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-206ENST00000542310 MYH8P13535 1937 aa19■□□□□ 0.63
VPS33A-206ENST00000542310 SLC34A2O95436 690 aa18.99■□□□□ 0.63
VPS33A-206ENST00000542310 BACE1P56817 501 aa18.99■□□□□ 0.63
VPS33A-206ENST00000542310 RIOK1Q9BRS2 568 aaKnown RBP18.99■□□□□ 0.63
VPS33A-206ENST00000542310 SAP30BPQ9UHR5 308 aaKnown RBP18.99■□□□□ 0.63
VPS33A-206ENST00000542310 C19orf81C9J6K1 198 aa18.98■□□□□ 0.63
VPS33A-206ENST00000542310 IRF5Q13568 498 aa18.98■□□□□ 0.63
VPS33A-206ENST00000542310 MTMR2Q13614 643 aa18.98■□□□□ 0.63
VPS33A-206ENST00000542310 SERPINB13Q9UIV8 391 aa18.98■□□□□ 0.63
VPS33A-206ENST00000542310 TNPO2O14787 897 aaKnown RBP18.97■□□□□ 0.63
VPS33A-206ENST00000542310 ECM2O94769 699 aaPredicted RBP18.97■□□□□ 0.63
VPS33A-206ENST00000542310 PDE6AP16499 860 aa18.97■□□□□ 0.63
VPS33A-206ENST00000542310 HOXA7P31268 230 aaPredicted RBP18.97■□□□□ 0.63
VPS33A-206ENST00000542310 UBXN2AP68543 259 aa18.97■□□□□ 0.63
VPS33A-206ENST00000542310 TATDN1Q6P1N9 297 aa18.97■□□□□ 0.63
VPS33A-206ENST00000542310 TTC6Q86TZ1 520 aa18.97■□□□□ 0.63
VPS33A-206ENST00000542310 ANKRD13CQ8N6S4 541 aa18.97■□□□□ 0.63
VPS33A-206ENST00000542310 NKX2-3Q8TAU0 364 aa18.97■□□□□ 0.63
VPS33A-206ENST00000542310 ASCC2Q9H1I8 757 aaPredicted RBP18.97■□□□□ 0.63
VPS33A-206ENST00000542310 TMOD4Q9NZQ9 345 aa18.97■□□□□ 0.63
VPS33A-206ENST00000542310 MAGEB6P1A0A0J9YX57 407 aa18.96■□□□□ 0.63
VPS33A-206ENST00000542310 USP17L10C9JJH3 530 aa18.96■□□□□ 0.63
VPS33A-206ENST00000542310 GDF11O95390 407 aa18.96■□□□□ 0.63
VPS33A-206ENST00000542310 PXYLP1Q8TE99 480 aa18.96■□□□□ 0.63
VPS33A-206ENST00000542310 TAOK2Q9UL54 1235 aa18.96■□□□□ 0.63
VPS33A-206ENST00000542310 GABRQQ9UN88 632 aa18.96■□□□□ 0.63
VPS33A-206ENST00000542310 PLXNB2O15031 1838 aa18.95■□□□□ 0.62
VPS33A-206ENST00000542310 APBB1O00213 710 aa18.95■□□□□ 0.62
VPS33A-206ENST00000542310 IRX3P78415 501 aaPredicted RBP18.95■□□□□ 0.62
VPS33A-206ENST00000542310 JAG1P78504 1218 aa18.95■□□□□ 0.62
VPS33A-206ENST00000542310 SLC9C2Q5TAH2 1124 aa18.95■□□□□ 0.62
VPS33A-206ENST00000542310 GTF3C2Q8WUA4 911 aaPredicted RBP18.95■□□□□ 0.62
VPS33A-206ENST00000542310 COA7Q96BR5 231 aa18.95■□□□□ 0.62
VPS33A-206ENST00000542310 DNAJC2Q99543 621 aaKnown RBP18.95■□□□□ 0.62
VPS33A-206ENST00000542310 CRNKL1Q9BZJ0 848 aaKnown RBP18.95■□□□□ 0.62
VPS33A-206ENST00000542310 MORF4L1Q9UBU8 362 aa18.95■□□□□ 0.62
VPS33A-206ENST00000542310 TCRBV5S4A2TA0A5A2 114 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 GOLIM4O00461 696 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 CAPN2P17655 700 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 ATP5JP18859 108 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 FLT3LGP49771 235 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 MTFR1Q15390 333 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 GCC1Q96CN9 775 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 SHISA4Q96DD7 197 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 PAG1Q9NWQ8 432 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 ZNF532Q9HCE3 1301 aa18.94■□□□□ 0.62
VPS33A-206ENST00000542310 ADCY3O60266 1144 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 MYCP01106 439 aaPredicted RBP18.93■□□□□ 0.62
VPS33A-206ENST00000542310 GH2P01242 217 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 GJB1P08034 283 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 CCL5P13501 91 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 GJA8P48165 433 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 SHROOM1Q2M3G4 852 aaPredicted RBP18.93■□□□□ 0.62
VPS33A-206ENST00000542310 C20orf194Q5TEA3 1177 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 C12orf42Q96LP6 360 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 LRRCC1Q9C099 1032 aa18.93■□□□□ 0.62
VPS33A-206ENST00000542310 BAZ2AQ9UIF9 1905 aaKnown RBP18.93■□□□□ 0.62
VPS33A-206ENST00000542310 GABPAQ06546 454 aa18.92■□□□□ 0.62
VPS33A-206ENST00000542310 USP17L2Q6R6M4 530 aa18.92■□□□□ 0.62
VPS33A-206ENST00000542310 HAUS7Q99871 368 aa18.92■□□□□ 0.62
VPS33A-206ENST00000542310 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.92■□□□□ 0.62
VPS33A-206ENST00000542310 BIN2Q9UBW5 565 aaPredicted RBP18.92■□□□□ 0.62
VPS33A-206ENST00000542310 ADD2P35612 726 aa18.91■□□□□ 0.62
VPS33A-206ENST00000542310 USP14P54578 494 aa18.91■□□□□ 0.62
VPS33A-206ENST00000542310 HERVK_113P62684 666 aa18.91■□□□□ 0.62
VPS33A-206ENST00000542310 CERKLQ49MI3 558 aaPredicted RBP18.91■□□□□ 0.62
VPS33A-206ENST00000542310 RNF208Q9H0X6 261 aa18.91■□□□□ 0.62
VPS33A-206ENST00000542310 INHAP05111 366 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 POLR3DP05423 398 aaPredicted RBP18.9■□□□□ 0.62
VPS33A-206ENST00000542310 SHMT1P34896 483 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 PLCD1P51178 756 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 ABCB5Q2M3G0 1257 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 LCORLQ8N3X6 602 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 FEZ1Q99689 392 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 KIAA1683Q9H0B3 1180 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 BOLA2Q9H3K6 86 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 CABP5Q9NP86 173 aa18.9■□□□□ 0.62
VPS33A-206ENST00000542310 EDC3Q96F86 508 aaKnown RBP18.89■□□□□ 0.61
VPS33A-206ENST00000542310 DCP1AQ9NPI6 582 aaPredicted RBP18.89■□□□□ 0.61
VPS33A-206ENST00000542310 EMILIN3Q9NT22 766 aa18.89■□□□□ 0.61
VPS33A-206ENST00000542310 MCM9Q9NXL9 1143 aa18.89■□□□□ 0.61
VPS33A-206ENST00000542310 A0A0G2JMZ2 1700 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 ELNP15502 786 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 RAB3GAP1Q15042 981 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 UBE3CQ15386 1083 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 UBE2Q1Q7Z7E8 422 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 GPRC5AQ8NFJ5 357 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 U2AF1L4Q8WU68 220 aaKnown RBP18.88■□□□□ 0.61
VPS33A-206ENST00000542310 SOCS4Q8WXH5 440 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 P2RX7Q99572 595 aaKnown RBP18.88■□□□□ 0.61
VPS33A-206ENST00000542310 UNC93B1Q9H1C4 597 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 ATP8A2Q9NTI2 1148 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 SWAP70Q9UH65 585 aa18.88■□□□□ 0.61
VPS33A-206ENST00000542310 HMGCRP04035 888 aa18.87■□□□□ 0.61
VPS33A-206ENST00000542310 MAPK4P31152 587 aa18.87■□□□□ 0.61
VPS33A-206ENST00000542310 ZSCAN25Q6NSZ9 544 aa18.87■□□□□ 0.61
VPS33A-206ENST00000542310 SDR42E1Q8WUS8 393 aa18.87■□□□□ 0.61
VPS33A-206ENST00000542310 PAK6Q9NQU5 681 aaPredicted RBP18.87■□□□□ 0.61
VPS33A-206ENST00000542310 GJD2Q9UKL4 321 aa18.87■□□□□ 0.61
VPS33A-206ENST00000542310 USP17L15C9J2P7 530 aa18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms