RNA–Protein interactions for RNA: ENST00000541280.1

SUDS3-202, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 659 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-202ENST00000541280 PLCB3Q01970 1234 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 MAP7Q14244 749 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 AKAP4Q5JQC9 854 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 PI16Q6UXB8 463 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 SEMA6CQ9H3T2 930 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 RAD18Q9NS91 495 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 KRT82Q9NSB4 513 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 ATG3Q9NT62 314 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 TBX22Q9Y458 520 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 HFM1A2PYH4 1435 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 ARHGAP23Q9P227 1491 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 MYO3AQ8NEV4 1616 aa8.43□□□□□ -1.06
SUDS3-202ENST00000541280 ADAMTS4O75173 837 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 HOXA10P31260 410 aaPredicted RBP8.42□□□□□ -1.06
SUDS3-202ENST00000541280 FMR1Q06787 632 aaKnown RBP eCLIP8.42□□□□□ -1.06
SUDS3-202ENST00000541280 MSMPQ1L6U9 139 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 SEZ6L2Q6UXD5 910 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 DTHD1Q6ZMT9 781 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 OSBPL1AQ9BXW6 950 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 BCO2Q9BYV7 579 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 PPP4R2Q9NY27 417 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 LEMD3Q9Y2U8 911 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 NAIPQ13075 1403 aa8.42□□□□□ -1.06
SUDS3-202ENST00000541280 CROCC2H7BZ55 1655 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 ZNF142P52746 1687 aaPredicted RBP8.41□□□□□ -1.06
SUDS3-202ENST00000541280 DEPDC5O75140 1603 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 LTBP4Q8N2S1 1624 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 SLIT1O75093 1534 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 CPS1P31327 1500 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 PNMA6FA0A0J9YX94 578 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 TMPRSS2O15393 492 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 ADMP35318 185 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 GP2P55259 537 aaKnown RBP8.41□□□□□ -1.06
SUDS3-202ENST00000541280 FCGRTP55899 365 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 KIF4BQ2VIQ3 1234 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 DYMQ7RTS9 669 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 PDZD3Q86UT5 571 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 SHISA5Q8N114 240 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 FBXL6Q8N531 539 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 FBF1Q8TES7 1133 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 CCDC86Q9H6F5 360 aaKnown RBP8.41□□□□□ -1.06
SUDS3-202ENST00000541280 TMEM39AQ9NV64 488 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 AP4E1Q9UPM8 1137 aa8.41□□□□□ -1.06
SUDS3-202ENST00000541280 STRCQ7RTU9 1775 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 EFCAB6Q5THR3 1501 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 RPGRIP1LQ68CZ1 1315 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 ZNF862O60290 1169 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 PRNPP04156 253 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 NFICP08651 508 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 GSTP1P09211 210 aaKnown RBP8.4□□□□□ -1.06
SUDS3-202ENST00000541280 ASPAP45381 313 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 PPP2R3AQ06190 1150 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 PDE3AQ14432 1141 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 MCTP1Q6DN14 999 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 TBC1D32Q96NH3 1257 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 CRIM1Q9NZV1 1036 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 PPP1R9AQ9ULJ8 1098 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 PCDHGC5Q9Y5F6 944 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 OAS3Q9Y6K5 1087 aaKnown RBP8.4□□□□□ -1.06
SUDS3-202ENST00000541280 IVNS1ABPQ9Y6Y0 642 aa8.4□□□□□ -1.06
SUDS3-202ENST00000541280 PLEKHG1Q9ULL1 1385 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 RAB6AP20340 208 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 HNRNPUQ00839 825 aaKnown RBP eCLIP8.39□□□□□ -1.07
SUDS3-202ENST00000541280 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.39□□□□□ -1.07
SUDS3-202ENST00000541280 C3orf58Q8NDZ4 430 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 ANKRD24Q8TF21 1146 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 ASB16Q96NS5 453 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 SLC26A8Q96RN1 970 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 SRCIN1Q9C0H9 1055 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 C1GALT1Q9NS00 363 aa8.39□□□□□ -1.07
SUDS3-202ENST00000541280 WNT11O96014 354 aa8.38□□□□□ -1.07
SUDS3-202ENST00000541280 ZNF157P51786 506 aaPredicted RBP8.38□□□□□ -1.07
SUDS3-202ENST00000541280 ZNF326Q5BKZ1 582 aaKnown RBP8.38□□□□□ -1.07
SUDS3-202ENST00000541280 NXPE4Q6UWF7 544 aa8.38□□□□□ -1.07
SUDS3-202ENST00000541280 ZSCAN29Q8IWY8 852 aaPredicted RBP8.38□□□□□ -1.07
SUDS3-202ENST00000541280 WDR89Q96FK6 387 aaPredicted RBP8.38□□□□□ -1.07
SUDS3-202ENST00000541280 MPHOSPH9Q99550 1183 aa8.38□□□□□ -1.07
SUDS3-202ENST00000541280 TRAIPQ9BWF2 469 aa8.38□□□□□ -1.07
SUDS3-202ENST00000541280 KRTAP9-2Q9BYQ4 174 aa8.38□□□□□ -1.07
SUDS3-202ENST00000541280 GPN3Q9UHW5 284 aaPredicted RBP8.38□□□□□ -1.07
SUDS3-202ENST00000541280 RIMS2Q9UQ26 1411 aa8.37□□□□□ -1.07
SUDS3-202ENST00000541280 PIK3R4Q99570 1358 aa8.37□□□□□ -1.07
SUDS3-202ENST00000541280 LIG1P18858 919 aa8.37□□□□□ -1.07
SUDS3-202ENST00000541280 CYP27A1Q02318 531 aa8.37□□□□□ -1.07
SUDS3-202ENST00000541280 ATXN3LQ9H3M9 355 aa8.37□□□□□ -1.07
SUDS3-202ENST00000541280 CACNA2D2Q9NY47 1150 aa8.37□□□□□ -1.07
SUDS3-202ENST00000541280 UNC13BO14795 1591 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 FAM170BA6NMN3 283 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 SLFN14P0C7P3 912 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 ID3Q02535 119 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 SULF2Q8IWU5 870 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 FANCD2OSQ96PS1 177 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 ZFYVE9O95405 1425 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 SETD5Q9C0A6 1442 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 NCOA3Q9Y6Q9 1424 aa8.36□□□□□ -1.07
SUDS3-202ENST00000541280 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.35□□□□□ -1.07
SUDS3-202ENST00000541280 GIPC1O14908 333 aa8.35□□□□□ -1.07
SUDS3-202ENST00000541280 NME2P22392 152 aa8.35□□□□□ -1.07
SUDS3-202ENST00000541280 ALG1LQ6GMV1 187 aa8.35□□□□□ -1.07
SUDS3-202ENST00000541280 PPM1HQ9ULR3 514 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms