RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 TRIM75PA6NK02 468 aa20.31■□□□□ 0.84
CD9-209ENST00000540891 USP17L5A8MUK1 530 aa20.31■□□□□ 0.84
CD9-209ENST00000540891 GPAA1O43292 621 aa20.31■□□□□ 0.84
CD9-209ENST00000540891 ASNSP08243 561 aa20.31■□□□□ 0.84
CD9-209ENST00000540891 LRRFIP1Q32MZ4 808 aaKnown RBP20.31■□□□□ 0.84
CD9-209ENST00000540891 BAZ2AQ9UIF9 1905 aaKnown RBP20.31■□□□□ 0.84
CD9-209ENST00000540891 CYP2D7A0A087X1C5 515 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 GSG1L2A8MUP6 293 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 USP17L12C9JPN9 530 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 USP17L21D6R901 530 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 PDE4AP27815 886 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 SPP2Q13103 211 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 C12orf60Q5U649 245 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 SLC44A5Q8NCS7 719 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 ZNF280CQ8ND82 737 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 GINM1Q9NU53 330 aa20.3■□□□□ 0.84
CD9-209ENST00000540891 PDHXO00330 501 aa20.29■□□□□ 0.84
CD9-209ENST00000540891 FKTNO75072 461 aa20.29■□□□□ 0.84
CD9-209ENST00000540891 CTR9Q6PD62 1173 aa20.29■□□□□ 0.84
CD9-209ENST00000540891 DYNLL2Q96FJ2 89 aa20.29■□□□□ 0.84
CD9-209ENST00000540891 WDR18Q9BV38 432 aa20.29■□□□□ 0.84
CD9-209ENST00000540891 TBC1D2Q9BYX2 928 aa20.29■□□□□ 0.84
CD9-209ENST00000540891 ZFYVE28Q9HCC9 887 aa20.29■□□□□ 0.84
CD9-209ENST00000540891 EPB41L4AQ9HCS5 686 aaPredicted RBP20.29■□□□□ 0.84
CD9-209ENST00000540891 GH2P01242 217 aa20.28■□□□□ 0.84
CD9-209ENST00000540891 DGKZQ13574 1117 aa20.28■□□□□ 0.84
CD9-209ENST00000540891 CERKLQ49MI3 558 aaPredicted RBP20.28■□□□□ 0.84
CD9-209ENST00000540891 FASTKD5Q7L8L6 764 aaKnown RBP20.28■□□□□ 0.84
CD9-209ENST00000540891 MCOLN1Q9GZU1 580 aa20.28■□□□□ 0.84
CD9-209ENST00000540891 AS3MTQ9HBK9 375 aa20.28■□□□□ 0.84
CD9-209ENST00000540891 ADGRA2Q96PE1 1338 aa20.27■□□□□ 0.84
CD9-209ENST00000540891 TLR2O60603 784 aa20.27■□□□□ 0.84
CD9-209ENST00000540891 GUCY1A2P33402 732 aa20.27■□□□□ 0.84
CD9-209ENST00000540891 CAP1Q01518 475 aa20.27■□□□□ 0.84
CD9-209ENST00000540891 SH3D19Q5HYK7 790 aa20.27■□□□□ 0.84
CD9-209ENST00000540891 GADL1Q6ZQY3 521 aa20.27■□□□□ 0.84
CD9-209ENST00000540891 FOXP2O15409 715 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 GNAT2P19087 354 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 HMGCS2P54868 508 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 ABCB5Q2M3G0 1257 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 SBK1Q52WX2 424 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 TREML2Q5T2D2 321 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 GIMAP6Q6P9H5 292 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 CCDC129Q6ZRS4 1044 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 CTU1Q7Z7A3 348 aaKnown RBP20.26■□□□□ 0.83
CD9-209ENST00000540891 DDRGK1Q96HY6 314 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 ARPP21Q9UBL0 812 aaPredicted RBP20.26■□□□□ 0.83
CD9-209ENST00000540891 SWAP70Q9UH65 585 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 TAOK2Q9UL54 1235 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 LOC285556D6RIA3 1793 aa20.26■□□□□ 0.83
CD9-209ENST00000540891 TRIM6-TRIM34B2RNG4 842 aa20.25■□□□□ 0.83
CD9-209ENST00000540891 PATL2C9JE40 543 aaKnown RBP20.25■□□□□ 0.83
CD9-209ENST00000540891 BACE1P56817 501 aa20.25■□□□□ 0.83
CD9-209ENST00000540891 MTMR2Q13614 643 aa20.25■□□□□ 0.83
CD9-209ENST00000540891 C16orf86Q6ZW13 317 aa20.25■□□□□ 0.83
CD9-209ENST00000540891 PROCA1Q8NCQ7 364 aaPredicted RBP20.25■□□□□ 0.83
CD9-209ENST00000540891 AGTPBP1Q9UPW5 1226 aa20.25■□□□□ 0.83
CD9-209ENST00000540891 SLC45A1Q9Y2W3 748 aa20.25■□□□□ 0.83
CD9-209ENST00000540891 A0A0D9SFI3 127 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 CYP2C8P10632 490 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 CDK8P49336 464 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 SP3Q02447 781 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 C17orf99Q6UX52 265 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 TICAM2Q86XR7 235 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 IFNL3Q8IZI9 196 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 RILPL2Q969X0 211 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 FAM227BQ96M60 508 aa20.24■□□□□ 0.83
CD9-209ENST00000540891 USP17L10C9JJH3 530 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 AKR1B1P15121 316 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 SEPT2Q15019 361 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 RAB3GAP1Q15042 981 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 IFFO2Q5TF58 517 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 AMOTL1Q8IY63 956 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 CD99L2Q8TCZ2 262 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 PARK7Q99497 189 aaKnown RBP20.23■□□□□ 0.83
CD9-209ENST00000540891 HELLSQ9NRZ9 838 aa20.23■□□□□ 0.83
CD9-209ENST00000540891 ROBO3Q96MS0 1386 aa20.22■□□□□ 0.83
CD9-209ENST00000540891 APPP05067 770 aa20.22■□□□□ 0.83
CD9-209ENST00000540891 NMIQ13287 307 aaPredicted RBP20.22■□□□□ 0.83
CD9-209ENST00000540891 ACER1Q8TDN7 264 aa20.22■□□□□ 0.83
CD9-209ENST00000540891 ERO1AQ96HE7 468 aa20.22■□□□□ 0.83
CD9-209ENST00000540891 ABHD8Q96I13 439 aa20.22■□□□□ 0.83
CD9-209ENST00000540891 CABP5Q9NP86 173 aa20.22■□□□□ 0.83
CD9-209ENST00000540891 CPA4Q9UI42 421 aa20.22■□□□□ 0.83
CD9-209ENST00000540891 MINDY4BA8MYZ0 360 aa20.21■□□□□ 0.83
CD9-209ENST00000540891 C19orf81C9J6K1 198 aa20.21■□□□□ 0.83
CD9-209ENST00000540891 GSPT1P15170 499 aaKnown RBP20.21■□□□□ 0.83
CD9-209ENST00000540891 SDSP20132 328 aa20.21■□□□□ 0.83
CD9-209ENST00000540891 TDO2P48775 406 aa20.21■□□□□ 0.83
CD9-209ENST00000540891 VPS53Q5VIR6 699 aa20.21■□□□□ 0.83
CD9-209ENST00000540891 EMILIN3Q9NT22 766 aa20.21■□□□□ 0.83
CD9-209ENST00000540891 MPHOSPH10O00566 681 aaKnown RBP20.2■□□□□ 0.82
CD9-209ENST00000540891 BCRP11274 1271 aa20.2■□□□□ 0.82
CD9-209ENST00000540891 MCMDC2Q4G0Z9 681 aa20.2■□□□□ 0.82
CD9-209ENST00000540891 TTC22Q5TAA0 569 aa20.2■□□□□ 0.82
CD9-209ENST00000540891 TMEM179Q6ZVK1 233 aa20.2■□□□□ 0.82
CD9-209ENST00000540891 OTOP1Q7RTM1 612 aa20.2■□□□□ 0.82
CD9-209ENST00000540891 A0A1W2PRG0 241 aa20.19■□□□□ 0.82
CD9-209ENST00000540891 ZNF589Q86UQ0 364 aaPredicted RBP20.19■□□□□ 0.82
CD9-209ENST00000540891 CLEC10AQ8IUN9 316 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms