RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 ERVH48-1M5A8F1 160 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 SASH1O94885 1247 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 PPP2R1AP30153 589 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 PRMT2P55345 433 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 MCCD1P59942 119 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-214ENST00000540865 NR5A1Q13285 461 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 SUPT20HL1Q3ZLR7 823 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 SLFNL1Q499Z3 407 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 CCDC152Q4G0S7 254 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 TBC1D9Q6ZT07 1266 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 RNF135Q8IUD6 432 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 CCDC116Q8IYX3 515 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 PHTF2Q8N3S3 785 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 ZBED3Q96IU2 234 aaPredicted RBP5.99□□□□□ -1.45
SNHG1-214ENST00000540865 PLEKHF1Q96S99 279 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 PTPN18Q99952 460 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 HTATIP2Q9BUP3 242 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 ZFYVE28Q9HCC9 887 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 SEC31BQ9NQW1 1179 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 NR2E3Q9Y5X4 410 aa5.99□□□□□ -1.45
SNHG1-214ENST00000540865 ANKRD36CQ5JPF3 1778 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 MED23Q9ULK4 1368 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 ATP5J2-PTCD1G3V325 749 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 ZBTB7BO15156 539 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-214ENST00000540865 GNRH1P01148 92 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 IREB2P48200 963 aaKnown RBP5.98□□□□□ -1.45
SNHG1-214ENST00000540865 PPP1R26Q5T8A7 1209 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-214ENST00000540865 UBE2Q1Q7Z7E8 422 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 ANKRD18AQ8IVF6 992 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 ANKRD13AQ8IZ07 590 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 DEPDC4Q8N2C3 294 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 ZBTB38Q8NAP3 1195 aaPredicted RBP5.98□□□□□ -1.45
SNHG1-214ENST00000540865 SH3TC2Q8TF17 1288 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 ZNF428Q96B54 188 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 SHISA4Q96DD7 197 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 MXD3Q9BW11 206 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 COA1Q9GZY4 146 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 ZFAND3Q9H8U3 227 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 FZD1Q9UP38 647 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 PCDHB11Q9Y5F2 797 aa5.98□□□□□ -1.45
SNHG1-214ENST00000540865 RBBP6Q7Z6E9 1792 aaKnown RBP5.98□□□□□ -1.45
SNHG1-214ENST00000540865 SOX1O00570 391 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 CAPN5O15484 640 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 PDE8AO60658 829 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 USP2O75604 605 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 WDHD1O75717 1129 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 MYCP01106 439 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 SKIP12755 728 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 SCTRP47872 440 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 GJA8P48165 433 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 WDR4P57081 412 aaKnown RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 KIF22Q14807 665 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 DLGAP5Q15398 846 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 TAF1CQ15572 869 aaPredicted RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 TTLL5Q6EMB2 1281 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 KIAA0825Q8IV33 1275 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 CCDC82Q8N4S0 544 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 BRI3BPQ8WY22 251 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 ITPKCQ96DU7 683 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 ARID3AQ99856 593 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 PNNQ9H307 717 aaKnown RBP5.97□□□□□ -1.45
SNHG1-214ENST00000540865 CYLDQ9NQC7 956 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 CHPF2Q9P2E5 772 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 STXBP5LQ9Y2K9 1186 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 ZNF804BA4D1E1 1349 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 SCN9AQ15858 1988 aa5.97□□□□□ -1.45
SNHG1-214ENST00000540865 KDM3BQ7LBC6 1761 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 TLR2O60603 784 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 ZIC2O95409 532 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 PCCAP05165 728 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 GJB1P08034 283 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 HOXB7P09629 217 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 TIMP2P16035 220 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 CAPN2P17655 700 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 CCT4P50991 539 aaKnown RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 GTF2A2P52657 109 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 LACTBP83111 547 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 CBLBQ13191 982 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 OXLD1Q5BKU9 147 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 NBPF12Q5TAG4 269 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 PLPP7Q8NBV4 271 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 ZNF592Q92610 1267 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 OPTNQ96CV9 577 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 CDC5LQ99459 802 aaKnown RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 KLF16Q9BXK1 252 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 ZCCHC17Q9NP64 241 aaKnown RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 BSDC1Q9NW68 430 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 HYPKQ9NX55 129 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 TFIP11Q9UBB9 837 aaKnown RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 DBF4Q9UBU7 674 aaPredicted RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 MINPP1Q9UNW1 487 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 LEMD3Q9Y2U8 911 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 SSC5DA1L4H1 1573 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 DDX60Q8IY21 1712 aaKnown RBP5.96□□□□□ -1.46
SNHG1-214ENST00000540865 MAPK8IP3Q9UPT6 1336 aa5.96□□□□□ -1.46
SNHG1-214ENST00000540865 COL4A1P02462 1669 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 CCL15-CCL14A0A0B4J2E2 113 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 PALM3A6NDB9 673 aaPredicted RBP5.95□□□□□ -1.46
SNHG1-214ENST00000540865 MYO1BO43795 1136 aa5.95□□□□□ -1.46
SNHG1-214ENST00000540865 HOXD10P28358 340 aa5.95□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms