RNA–Protein interactions for RNA: ENST00000540797.5

USP3-204, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 2 BASIC

Gene USP3, Length 5,474 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-204ENST00000540797 ALAS1P13196 640 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 BCCIPQ9P287 314 aaKnown RBP eCLIP15.84■□□□□ 0.13
USP3-204ENST00000540797 CLRN2A0PK11 232 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 KRT83P78385 493 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 PNMA1Q8ND90 353 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 LMBR1Q8WVP7 490 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 TACC1O75410 805 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 RAPGEF1Q13905 1077 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 CCDC93Q567U6 631 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 ATP8A2Q9NTI2 1148 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 CTNND2Q9UQB3 1225 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 POLR2DO15514 142 aaKnown RBP15.84■□□□□ 0.13
USP3-204ENST00000540797 PTH1RQ03431 593 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 NLRX1Q86UT6 975 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 SELENOOQ9BVL4 669 aa15.84■□□□□ 0.13
USP3-204ENST00000540797 CCDC66A2RUB6 948 aa15.83■□□□□ 0.13
USP3-204ENST00000540797 CYP27B1O15528 508 aa15.83■□□□□ 0.13
USP3-204ENST00000540797 FAM173BQ6P4H8 233 aa15.83■□□□□ 0.13
USP3-204ENST00000540797 LRRC45Q96CN5 670 aa15.83■□□□□ 0.13
USP3-204ENST00000540797 TNKSO95271 1327 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 TMEM110-MUSTN1A8MSY1 372 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 JAK2O60674 1132 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 FGAP02671 866 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 DNM2P50570 870 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 ZSWIM4Q9H7M6 989 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 DBNLQ9UJU6 430 aaKnown RBP15.83■□□□□ 0.12
USP3-204ENST00000540797 MMP10P09238 476 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 ABCB5Q2M3G0 1257 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 RPS6KA4O75676 772 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 MYL5Q02045 173 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 TRIM6Q9C030 488 aaPredicted RBP15.83■□□□□ 0.12
USP3-204ENST00000540797 IFNKQ9P0W0 207 aa15.83■□□□□ 0.12
USP3-204ENST00000540797 KIF5AQ12840 1032 aa15.82■□□□□ 0.12
USP3-204ENST00000540797 ATP10DQ9P241 1426 aa15.82■□□□□ 0.12
USP3-204ENST00000540797 CALUO43852 315 aaPredicted RBP15.82■□□□□ 0.12
USP3-204ENST00000540797 GSPT1P15170 499 aaKnown RBP15.82■□□□□ 0.12
USP3-204ENST00000540797 GNPTABQ3T906 1256 aa15.82■□□□□ 0.12
USP3-204ENST00000540797 DALRD3Q5D0E6 543 aaKnown RBP15.82■□□□□ 0.12
USP3-204ENST00000540797 LUC7L2Q9Y383 392 aaKnown RBP15.82■□□□□ 0.12
USP3-204ENST00000540797 NPR1P16066 1061 aa15.82■□□□□ 0.12
USP3-204ENST00000540797 MRPL11Q9Y3B7 192 aaKnown RBP15.82■□□□□ 0.12
USP3-204ENST00000540797 CKAP4Q07065 602 aaKnown RBP15.82■□□□□ 0.12
USP3-204ENST00000540797 KIF22Q14807 665 aa15.82■□□□□ 0.12
USP3-204ENST00000540797 ARHGEF16Q5VV41 709 aa15.82■□□□□ 0.12
USP3-204ENST00000540797 CDAN1Q8IWY9 1227 aa15.82■□□□□ 0.12
USP3-204ENST00000540797 NOC4LQ9BVI4 516 aaKnown RBP15.82■□□□□ 0.12
USP3-204ENST00000540797 HERC4Q5GLZ8 1057 aaPredicted RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 FANCBQ8NB91 859 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 SPC25Q9HBM1 224 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 KLRF2D3W0D1 207 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 CCDC175P0C221 793 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 FMNL3Q8IVF7 1028 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 ZNF274Q96GC6 653 aaPredicted RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 CSRNP1Q96S65 589 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 PSTPIP2Q9H939 334 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 ATG3Q9NT62 314 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 AXIN2Q9Y2T1 843 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 SUSD4Q5VX71 490 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 CMTR1Q8N1G2 835 aaKnown RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 GLG1Q92896 1179 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 TNS3Q68CZ2 1445 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 FSD2A1L4K1 749 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 TESPA1A2RU30 521 aaPredicted RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 KRT86O43790 486 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 GAS7O60861 476 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 FLOT1O75955 427 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 ZNF853P0CG23 659 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 KRT5P13647 590 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 CABP7Q86V35 215 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 ZNF830Q96NB3 372 aaPredicted RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 M0QZ92 97 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 DTNBO60941 627 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 GOLGA8HP0CJ92 632 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 MAP2K1Q02750 393 aaPredicted RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 TRPC3Q13507 836 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 GRAPQ13588 217 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 SMC1AQ14683 1233 aaKnown RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 CLEC4GQ6UXB4 293 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 GRAPLQ8TC17 118 aaPredicted RBP15.81■□□□□ 0.12
USP3-204ENST00000540797 MAPK8IP1Q9UQF2 711 aa15.81■□□□□ 0.12
USP3-204ENST00000540797 CETN3O15182 167 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 RAD17O75943 681 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 CC2D2BQ6DHV5 1058 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 MYCT1Q8N699 235 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 TLR7Q9NYK1 1049 aaKnown RBP15.8■□□□□ 0.12
USP3-204ENST00000540797 CDC42BPAQ5VT25 1732 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 POLR2MP0CAP2 368 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 DYMQ7RTS9 669 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 FBXO11Q86XK2 927 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 IQGAP3Q86VI3 1631 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 MCTP2Q6DN12 878 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 GTF3C6Q969F1 213 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 CCDC17Q96LX7 622 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 PABPN1LA6NDY0 278 aaKnown RBP15.8■□□□□ 0.12
USP3-204ENST00000540797 TMEM232C9JQI7 657 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 PCP11498 1178 aaKnown RBP15.8■□□□□ 0.12
USP3-204ENST00000540797 TTLL6Q8N841 843 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 MLXIPQ9HAP2 919 aa15.8■□□□□ 0.12
USP3-204ENST00000540797 ANKRD35Q8N283 1001 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms