RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 FGRP09769 529 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 PCP11498 1178 aaKnown RBP11.14□□□□□ -0.63
PAAF1-209ENST00000540659 PDIA4P13667 645 aaKnown RBP11.14□□□□□ -0.63
PAAF1-209ENST00000540659 CRKP46108 304 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 KIAA2012Q0VF49 1180 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 SEC23AQ15436 765 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 RTN1Q16799 776 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 DACT2Q5SW24 774 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 OTUD7BQ6GQQ9 843 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 CPLX2Q6PUV4 134 aaKnown RBP11.14□□□□□ -0.63
PAAF1-209ENST00000540659 USP17L1Q7RTZ2 530 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 ZNF654Q8IZM8 581 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 ZNF526Q8TF50 670 aaPredicted RBP11.14□□□□□ -0.63
PAAF1-209ENST00000540659 PHKBQ93100 1093 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 TEKT1Q969V4 418 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 PCDHAC2Q9Y5I4 1007 aa11.14□□□□□ -0.63
PAAF1-209ENST00000540659 GADD45BO75293 160 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-209ENST00000540659 CDKL5O76039 1030 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 TFAP4Q01664 338 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 SSRP1Q08945 709 aaKnown RBP11.13□□□□□ -0.63
PAAF1-209ENST00000540659 RESTQ13127 1097 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 STRIP1Q5VSL9 837 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 ZNF444Q8N0Y2 327 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-209ENST00000540659 CMTR1Q8N1G2 835 aaKnown RBP11.13□□□□□ -0.63
PAAF1-209ENST00000540659 TMTC2Q8N394 836 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 CCDC82Q8N4S0 544 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 ENAHQ8N8S7 591 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-209ENST00000540659 SLC44A5Q8NCS7 719 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 GPT2Q8TD30 523 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 C8orf76Q96K31 380 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 PSMD1Q99460 953 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 MTA3Q9BTC8 594 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 SLC26A6Q9BXS9 759 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 ZNF277Q9NRM2 450 aaPredicted RBP11.13□□□□□ -0.63
PAAF1-209ENST00000540659 RBM27Q9P2N5 1060 aaKnown RBP11.13□□□□□ -0.63
PAAF1-209ENST00000540659 ROBO3Q96MS0 1386 aa11.13□□□□□ -0.63
PAAF1-209ENST00000540659 ZC3H4Q9UPT8 1303 aaKnown RBP11.12□□□□□ -0.63
PAAF1-209ENST00000540659 YDJCA8MPS7 323 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 TSPY3P0CV98 308 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 TSPY8P0CW00 308 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 IARSP41252 1262 aaKnown RBP11.12□□□□□ -0.63
PAAF1-209ENST00000540659 FKBP1AP62942 108 aaKnown RBP11.12□□□□□ -0.63
PAAF1-209ENST00000540659 KRT85P78386 507 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 KLHL40Q2TBA0 621 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 CAVIN1Q6NZI2 390 aaKnown RBP11.12□□□□□ -0.63
PAAF1-209ENST00000540659 CDC42EP5Q6NZY7 148 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 HHIPL2Q6UWX4 724 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 CATIPQ7Z7H3 387 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 LARGE2Q8N3Y3 721 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 AIFM3Q96NN9 605 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 ALG1Q9BT22 464 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 DDX4Q9NQI0 724 aaKnown RBP11.12□□□□□ -0.63
PAAF1-209ENST00000540659 GJB4Q9NTQ9 266 aa11.12□□□□□ -0.63
PAAF1-209ENST00000540659 FAM217BQ9NTX9 383 aaPredicted RBP11.12□□□□□ -0.63
PAAF1-209ENST00000540659 RAD17O75943 681 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 CDK8P49336 464 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 CACNB3P54284 484 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 C16orf86Q6ZW13 317 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 FANCBQ8NB91 859 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 ZSCAN16Q9H4T2 348 aaPredicted RBP11.11□□□□□ -0.63
PAAF1-209ENST00000540659 KAT14Q9H8E8 782 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 TFIP11Q9UBB9 837 aaKnown RBP11.11□□□□□ -0.63
PAAF1-209ENST00000540659 WDR90Q96KV7 1748 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 NID2Q14112 1375 aa11.11□□□□□ -0.63
PAAF1-209ENST00000540659 MYO3BQ8WXR4 1341 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 SIPA1L1O43166 1804 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 UBE2Q2LH0YL09 131 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 FMNL1O95466 1100 aaPredicted RBP11.1□□□□□ -0.63
PAAF1-209ENST00000540659 RASA1P20936 1047 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 CEBPZQ03701 1054 aaKnown RBP11.1□□□□□ -0.63
PAAF1-209ENST00000540659 NTRK3Q16288 839 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 CSPP1Q1MSJ5 1256 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 APOBEC3HQ6NTF7 200 aaKnown RBP11.1□□□□□ -0.63
PAAF1-209ENST00000540659 MRIQ9BWK5 157 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 OSBPL5Q9H0X9 879 aaPredicted RBP11.1□□□□□ -0.63
PAAF1-209ENST00000540659 ZNF287Q9HBT7 754 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 GPBP1L1Q9HC44 474 aaPredicted RBP11.1□□□□□ -0.63
PAAF1-209ENST00000540659 MTMR7Q9Y216 660 aa11.1□□□□□ -0.63
PAAF1-209ENST00000540659 CCDC196A0A1B0GTZ2 297 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 PSMD14O00487 310 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 WDHD1O75717 1129 aaPredicted RBP11.09□□□□□ -0.63
PAAF1-209ENST00000540659 DDAH1O94760 285 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 PLEKHA8P1O95397 391 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 MBD3O95983 291 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 CALM1P0DP23 149 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 CALM2P0DP24 149 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 CALM3P0DP25 149 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 IFNAR1P17181 557 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 TCP10Q12799 353 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 NFIAQ12857 509 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 GNL2Q13823 731 aaKnown RBP11.09□□□□□ -0.63
PAAF1-209ENST00000540659 TRIM29Q14134 588 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 CFAP100Q494V2 611 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 TTC6Q86TZ1 520 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 NIM1KQ8IY84 436 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 TRIM22Q8IYM9 498 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 TMEM87AQ8NBN3 555 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 SPATA32Q96LK8 384 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 ZDHHC15Q96MV8 337 aa11.09□□□□□ -0.63
PAAF1-209ENST00000540659 IL17RBQ9NRM6 502 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms