RNA–Protein interactions for RNA: ENST00000540266.5

SSPN-207, Transcript of sarcospan, humanhuman

TSL 4 BASIC

Gene SSPN, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSPN-207ENST00000540266 FLRT1Q9NZU1 646 aa13.04□□□□□ -0.32
SSPN-207ENST00000540266 MAST2Q6P0Q8 1798 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 APAF1O14727 1248 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 ADGRE1Q14246 886 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 TRIM60Q495X7 471 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 TRPV1Q8NER1 839 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 TIFAQ96CG3 184 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 DDX4Q9NQI0 724 aaKnown RBP13.03□□□□□ -0.32
SSPN-207ENST00000540266 LTBP2Q14767 1821 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 UTYO14607 1347 aa13.03□□□□□ -0.32
SSPN-207ENST00000540266 HERVK_113P62684 666 aa13.02□□□□□ -0.33
SSPN-207ENST00000540266 RRP1BQ14684 758 aaKnown RBP13.02□□□□□ -0.33
SSPN-207ENST00000540266 TWISTNBQ3B726 338 aaPredicted RBP13.02□□□□□ -0.33
SSPN-207ENST00000540266 METTL24Q5JXM2 366 aa13.02□□□□□ -0.33
SSPN-207ENST00000540266 GJC2Q5T442 439 aaPredicted RBP13.02□□□□□ -0.33
SSPN-207ENST00000540266 MFSD14CQ5VZR4 134 aa13.02□□□□□ -0.33
SSPN-207ENST00000540266 PLEKHH3Q7Z736 793 aa13.02□□□□□ -0.33
SSPN-207ENST00000540266 EDC3Q96F86 508 aaKnown RBP13.02□□□□□ -0.33
SSPN-207ENST00000540266 OSBPL5Q9H0X9 879 aaPredicted RBP13.02□□□□□ -0.33
SSPN-207ENST00000540266 CXXC1Q9P0U4 656 aaPredicted RBP13.02□□□□□ -0.33
SSPN-207ENST00000540266 F6X3S4 739 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 HOXC6P09630 235 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 ERVK-9P63128 1117 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 ERVK-24P63145 666 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 MAP2K5Q13163 448 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 ZSCAN29Q8IWY8 852 aaPredicted RBP13.01□□□□□ -0.33
SSPN-207ENST00000540266 ARRDC4Q8NCT1 418 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 TSR2Q969E8 191 aaKnown RBP13.01□□□□□ -0.33
SSPN-207ENST00000540266 GAS2L1Q99501 681 aaPredicted RBP13.01□□□□□ -0.33
SSPN-207ENST00000540266 C11orf16Q9NQ32 467 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 TACC3Q9Y6A5 838 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 GAKO14976 1311 aa13.01□□□□□ -0.33
SSPN-207ENST00000540266 PTPRFP10586 1907 aa13□□□□□ -0.33
SSPN-207ENST00000540266 PHIPQ8WWQ0 1821 aa13□□□□□ -0.33
SSPN-207ENST00000540266 MYBBP1AQ9BQG0 1328 aaKnown RBP13□□□□□ -0.33
SSPN-207ENST00000540266 SALL1Q9NSC2 1324 aa13□□□□□ -0.33
SSPN-207ENST00000540266 USP17L5A8MUK1 530 aa13□□□□□ -0.33
SSPN-207ENST00000540266 KIAA0355O15063 1070 aa13□□□□□ -0.33
SSPN-207ENST00000540266 GPR37L1O60883 481 aa13□□□□□ -0.33
SSPN-207ENST00000540266 LDHBP07195 334 aaKnown RBP13□□□□□ -0.33
SSPN-207ENST00000540266 CAP2P40123 477 aa13□□□□□ -0.33
SSPN-207ENST00000540266 IRX3P78415 501 aaPredicted RBP13□□□□□ -0.33
SSPN-207ENST00000540266 TLE2Q04725 743 aa13□□□□□ -0.33
SSPN-207ENST00000540266 WDR43Q15061 677 aaKnown RBP eCLIP13□□□□□ -0.33
SSPN-207ENST00000540266 CCDC85BQ15834 202 aaPredicted RBP13□□□□□ -0.33
SSPN-207ENST00000540266 TMEM31Q5JXX7 168 aa13□□□□□ -0.33
SSPN-207ENST00000540266 WDR18Q9BV38 432 aa13□□□□□ -0.33
SSPN-207ENST00000540266 PRDM12Q9H4Q4 367 aa13□□□□□ -0.33
SSPN-207ENST00000540266 MUC6Q6W4X9 2439 aa13□□□□□ -0.33
SSPN-207ENST00000540266 FAM196BA6NMK8 535 aa12.99□□□□□ -0.33
SSPN-207ENST00000540266 PBX2P40425 430 aa12.99□□□□□ -0.33
SSPN-207ENST00000540266 BACE1P56817 501 aa12.99□□□□□ -0.33
SSPN-207ENST00000540266 PUM3Q15397 648 aaKnown RBP12.99□□□□□ -0.33
SSPN-207ENST00000540266 RABL6Q3YEC7 729 aaPredicted RBP12.99□□□□□ -0.33
SSPN-207ENST00000540266 IL27Q8NEV9 243 aa12.99□□□□□ -0.33
SSPN-207ENST00000540266 FAM163AQ96GL9 167 aaPredicted RBP12.99□□□□□ -0.33
SSPN-207ENST00000540266 SUCLG2Q96I99 432 aa12.99□□□□□ -0.33
SSPN-207ENST00000540266 CHD7Q9P2D1 2997 aa12.99□□□□□ -0.33
SSPN-207ENST00000540266 REV3LO60673 3130 aa12.98□□□□□ -0.33
SSPN-207ENST00000540266 IFIT1P09914 478 aaKnown RBP12.98□□□□□ -0.33
SSPN-207ENST00000540266 CYBAP13498 195 aa12.98□□□□□ -0.33
SSPN-207ENST00000540266 CNGA1P29973 690 aa12.98□□□□□ -0.33
SSPN-207ENST00000540266 CYP2C19P33261 490 aa12.98□□□□□ -0.33
SSPN-207ENST00000540266 RASIP1Q5U651 963 aa12.98□□□□□ -0.33
SSPN-207ENST00000540266 PBX4Q9BYU1 374 aa12.98□□□□□ -0.33
SSPN-207ENST00000540266 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.98□□□□□ -0.33
SSPN-207ENST00000540266 C9orf78Q9NZ63 289 aaPredicted RBP12.98□□□□□ -0.33
SSPN-207ENST00000540266 SLC15A5A6NIM6 579 aa12.97□□□□□ -0.33
SSPN-207ENST00000540266 CNMDO75829 334 aa12.97□□□□□ -0.33
SSPN-207ENST00000540266 ADCYAP1R1P41586 468 aa12.97□□□□□ -0.33
SSPN-207ENST00000540266 TFF2Q03403 129 aa12.97□□□□□ -0.33
SSPN-207ENST00000540266 FPGSQ05932 587 aa12.97□□□□□ -0.33
SSPN-207ENST00000540266 MTMR2Q13614 643 aa12.97□□□□□ -0.33
SSPN-207ENST00000540266 C16orf59Q7L2K0 433 aa12.97□□□□□ -0.33
SSPN-207ENST00000540266 GRXCR1A8MXD5 290 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 KBTBD13C9JR72 458 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 ALDH1L1O75891 902 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 CLTBP09497 229 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 NBPF7P0C2Y1 421 aaPredicted RBP12.96□□□□□ -0.33
SSPN-207ENST00000540266 PTPREP23469 700 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 RHBDL3P58872 404 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 JAG1P78504 1218 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 ATP2B2Q01814 1243 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 PICALMQ13492 652 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 CCAR1Q8IX12 1150 aaKnown RBP12.96□□□□□ -0.33
SSPN-207ENST00000540266 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 NPLOC4Q8TAT6 608 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 GTF3C2Q8WUA4 911 aaPredicted RBP12.96□□□□□ -0.33
SSPN-207ENST00000540266 LPIN2Q92539 896 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 AS3MTQ9HBK9 375 aa12.96□□□□□ -0.33
SSPN-207ENST00000540266 LOC285556D6RIA3 1793 aa12.96□□□□□ -0.34
SSPN-207ENST00000540266 C19orf81C9J6K1 198 aa12.95□□□□□ -0.34
SSPN-207ENST00000540266 RAG1P15918 1043 aa12.95□□□□□ -0.34
SSPN-207ENST00000540266 MRE11P49959 708 aa12.95□□□□□ -0.34
SSPN-207ENST00000540266 KCNQ1P51787 676 aa12.95□□□□□ -0.34
SSPN-207ENST00000540266 GRB14Q14449 540 aa12.95□□□□□ -0.34
SSPN-207ENST00000540266 LRRC41Q15345 812 aa12.95□□□□□ -0.34
SSPN-207ENST00000540266 KLHDC4Q8TBB5 520 aa12.95□□□□□ -0.34
SSPN-207ENST00000540266 KHSRPQ92945 711 aaKnown RBP eCLIP12.95□□□□□ -0.34
SSPN-207ENST00000540266 FERMT2Q96AC1 680 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms